Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08380

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,767,060	+		DZA65_RS08375	0.64	+0.8
1,767,060	+		DZA65_RS08375	0.64	-0.5
1,767,074	+		DZA65_RS08375	0.65	+1.0
1,767,167	-		DZA65_RS08375	0.71	+0.5
1,767,254	+		DZA65_RS08375	0.77	+0.3
1,767,532	+				-0.8
1,767,532	+				-1.1
1,767,532	+				-0.6
1,767,533	-				-0.6
1,767,554	+				-2.7
1,767,555	-				-0.6
1,767,556	+				-1.7
1,767,556	+				-0.5
1,767,556	+				-0.5
1,767,556	+				+0.3
1,767,556	+				-0.0
1,767,556	+				+1.3
1,767,556	+				-0.0
1,767,556	+				-0.9
1,767,556	+				+0.1
1,767,557	-				-0.6
1,767,557	-				+0.4
1,767,557	-				-0.2
1,767,557	-				+0.4
1,767,557	-				-0.2
1,767,557	-				+0.1
1,767,557	-				-0.4
1,767,557	-				-1.1
1,767,557	-				-0.9
1,767,557	-				-1.4
1,767,560	+				+0.4
1,767,560	+				-1.4
1,767,560	+				+0.1
1,767,560	+				-1.0
1,767,560	+				+0.2
1,767,560	+				-0.2
1,767,560	+				-0.1
1,767,560	+				-1.3
1,767,561	-				-0.6
1,767,561	-				-1.1
1,767,561	-				+1.0
1,767,561	-				-0.0
1,767,561	-				-0.2
1,767,561	-				-0.9
1,767,561	-				+2.5
1,767,581	+				-2.1
1,767,593	+				-0.9
1,767,593	+				+2.4
1,767,594	-				+0.9
1,767,611	+				+0.4
1,767,658	+				-2.4
1,767,658	+				-0.6
1,767,658	+				+1.4
1,767,658	+				+1.2
1,767,658	+				+1.0
1,767,658	+				+0.9
1,767,658	+				+1.8
1,767,658	+				-1.6
1,767,658	+				-1.9
1,767,658	+				+2.2
1,767,658	+				+1.1
1,767,658	+				+0.1
1,767,658	+				-0.9
1,767,659	-				-0.3
1,767,659	-				+0.6
1,767,659	-				+0.2
1,767,659	-				+0.4
1,767,659	-				+0.4
1,767,659	-				+1.6
1,767,659	-				+1.4
1,767,659	-				+0.4
1,767,659	-				+2.0
1,767,659	-				+1.4
1,767,659	-				-0.3
1,767,659	-				-1.7
1,767,659	-				-1.1
1,767,659	-				+0.8
1,767,659	-				-0.1
1,767,659	-				+0.0
1,767,659	-				-0.6
1,767,661	-				-0.4
1,767,661	-				-0.1
1,767,669	-				+0.4
1,767,669	-				+1.7
1,767,715	+				+1.2
1,767,716	-				-1.3
1,767,716	-				-0.3
1,767,716	-				-1.0
1,767,716	-				-2.4
1,767,716	-				+0.1
1,767,716	-				-0.1
1,767,723	+				-0.7
1,767,723	+				+2.0
1,767,723	+				-1.6
1,767,724	-				+1.1
1,767,724	-				+0.6
1,767,724	-				+0.4
1,767,724	-				-0.1
1,767,772	-				-2.1
1,767,772	-				-1.1
1,767,780	+				-0.3
1,767,780	+				-1.0
1,767,781	-				+0.2
1,767,782	+				-1.1
1,767,782	+				+0.7
1,767,782	+				+1.1
1,767,795	-				-2.4
1,767,880	+				+1.1
1,767,880	+				-1.6
1,767,881	-				+1.3
1,767,901	-				+0.4
1,767,945	+				-1.0
1,767,946	-				-1.1
1,767,948	+				+0.0
1,767,948	+				+0.9
1,767,949	-				-1.6
1,767,949	-				-1.0
1,767,949	-				-1.9
1,767,949	-				+0.4
1,767,949	-				-1.7
1,767,975	+				-0.6
1,767,975	+				-0.4
1,767,976	-				-0.9
1,767,976	-				-0.0
1,767,976	-				-1.5
1,767,976	-				-0.1
1,767,976	-				-2.4
1,767,985	-				-1.6
1,767,985	-				-1.1
1,768,069	-		DZA65_RS08380	0.11	-0.3
1,768,125	-		DZA65_RS08380	0.17	-0.2
1,768,254	+		DZA65_RS08380	0.30	-0.1
1,768,255	-		DZA65_RS08380	0.30	-1.6
1,768,329	+		DZA65_RS08380	0.38	-1.2
1,768,329	+		DZA65_RS08380	0.38	-0.5
1,768,329	+		DZA65_RS08380	0.38	-1.2
1,768,330	-		DZA65_RS08380	0.38	+0.3
1,768,634	+		DZA65_RS08380	0.70	+0.5
1,768,634	+		DZA65_RS08380	0.70	+0.4
1,768,634	+		DZA65_RS08380	0.70	+0.6
1,768,634	+		DZA65_RS08380	0.70	+0.1
1,768,634	+		DZA65_RS08380	0.70	+0.2
1,768,634	+		DZA65_RS08380	0.70	+0.9
1,768,634	+		DZA65_RS08380	0.70	-2.1
1,768,634	+		DZA65_RS08380	0.70	-1.3
1,768,634	+		DZA65_RS08380	0.70	+0.6
1,768,634	+		DZA65_RS08380	0.70	-1.0
1,768,635	-		DZA65_RS08380	0.70	+0.9
1,768,635	-		DZA65_RS08380	0.70	+2.6
1,768,635	-		DZA65_RS08380	0.70	+0.7
1,768,635	-		DZA65_RS08380	0.70	+0.0
1,768,635	-		DZA65_RS08380	0.70	+0.2
1,768,635	-		DZA65_RS08380	0.70	-1.4
1,768,635	-		DZA65_RS08380	0.70	+1.0
1,768,635	-		DZA65_RS08380	0.70	-1.0
1,768,635	-		DZA65_RS08380	0.70	+0.1
1,768,785	+		DZA65_RS08380	0.86	+1.0
1,768,785	+		DZA65_RS08380	0.86	-1.9
1,768,785	+		DZA65_RS08380	0.86	-0.5
1,768,785	+		DZA65_RS08380	0.86	+0.6
1,768,785	+		DZA65_RS08380	0.86	-0.9
1,768,785	+		DZA65_RS08380	0.86	-0.6
1,768,785	+		DZA65_RS08380	0.86	-1.6
1,768,786	-		DZA65_RS08380	0.86	+0.4
1,768,786	-		DZA65_RS08380	0.86	+0.4
1,768,806	+		DZA65_RS08380	0.88	-1.8
1,768,806	+		DZA65_RS08380	0.88	-0.8
1,768,806	+		DZA65_RS08380	0.88	-2.1
1,768,807	-		DZA65_RS08380	0.88	+1.2
1,768,807	-		DZA65_RS08380	0.88	+0.4
1,768,810	+		DZA65_RS08380	0.88	-0.1
1,768,810	+		DZA65_RS08380	0.88	-1.9
1,768,810	+		DZA65_RS08380	0.88	-1.2
1,768,815	+		DZA65_RS08380	0.89	-1.9
1,768,816	-		DZA65_RS08380	0.89	-0.1
1,768,816	-		DZA65_RS08380	0.89	-1.5
1,768,862	+				-0.4
1,768,862	+				-1.1
1,768,863	-				-0.8
1,768,863	-				-0.2
1,768,863	-				-1.4
1,768,863	-				+0.2
1,768,880	+				+0.9
1,768,880	+				+0.8
1,768,903	+				-2.6
1,768,903	+				+0.2
1,768,938	-				-0.0
1,768,938	-				+0.4
1,768,938	-				+0.3
1,768,957	+				-1.6
1,768,958	-				-0.5
1,769,051	+		DZA65_RS08385	0.14	-0.7
1,769,052	-		DZA65_RS08385	0.14	-0.8
1,769,148	+		DZA65_RS08385	0.24	+0.0
1,769,157	+		DZA65_RS08385	0.25	+0.9
1,769,157	+		DZA65_RS08385	0.25	-2.0
1,769,157	+		DZA65_RS08385	0.25	+0.1
1,769,158	-		DZA65_RS08385	0.25	+0.1
1,769,158	-		DZA65_RS08385	0.25	-0.1
1,769,158	-		DZA65_RS08385	0.25	-1.6
1,769,238	-		DZA65_RS08385	0.33	+1.9
1,769,282	+		DZA65_RS08385	0.38	+1.2
1,769,426	+		DZA65_RS08385	0.53	+1.4
1,769,426	+		DZA65_RS08385	0.53	-2.1
1,769,426	+		DZA65_RS08385	0.53	-0.1
1,769,426	+		DZA65_RS08385	0.53	+0.3
1,769,426	+		DZA65_RS08385	0.53	+1.4
1,769,427	-		DZA65_RS08385	0.53	-0.3
1,769,427	-		DZA65_RS08385	0.53	+0.3
1,769,427	-		DZA65_RS08385	0.53	+1.6
1,769,427	-		DZA65_RS08385	0.53	+1.4
1,769,430	+		DZA65_RS08385	0.53	+1.5
1,769,430	+		DZA65_RS08385	0.53	+1.1
1,769,430	+		DZA65_RS08385	0.53	-0.8
1,769,430	+		DZA65_RS08385	0.53	+0.4
1,769,430	+		DZA65_RS08385	0.53	+0.3
1,769,430	+		DZA65_RS08385	0.53	-0.6
1,769,430	+		DZA65_RS08385	0.53	+0.9
1,769,430	+		DZA65_RS08385	0.53	-0.4
1,769,430	+		DZA65_RS08385	0.53	+0.8
1,769,431	-		DZA65_RS08385	0.53	+2.6
1,769,431	-		DZA65_RS08385	0.53	+1.8
1,769,431	-		DZA65_RS08385	0.53	-0.7
1,769,431	-		DZA65_RS08385	0.53	+0.2
1,769,431	-		DZA65_RS08385	0.53	+0.6
1,769,431	-		DZA65_RS08385	0.53	-0.1
1,769,431	-		DZA65_RS08385	0.53	+0.5
1,769,431	-		DZA65_RS08385	0.53	+1.1
1,769,431	-		DZA65_RS08385	0.53	-1.6
1,769,431	-		DZA65_RS08385	0.53	+2.5
1,769,431	-		DZA65_RS08385	0.53	+0.2
1,769,431	-		DZA65_RS08385	0.53	+0.3
1,769,668	+		DZA65_RS08385	0.78	+0.9
1,769,741	+		DZA65_RS08385	0.85	+0.9
1,769,741	+		DZA65_RS08385	0.85	-0.8
1,769,741	+		DZA65_RS08385	0.85	+0.3
1,769,741	+		DZA65_RS08385	0.85	+0.1
1,769,741	+		DZA65_RS08385	0.85	+1.0
1,769,741	+		DZA65_RS08385	0.85	+1.1
1,769,742	-		DZA65_RS08385	0.85	-2.3
1,769,742	-		DZA65_RS08385	0.85	-1.9
1,769,742	-		DZA65_RS08385	0.85	-0.1
1,769,742	-		DZA65_RS08385	0.85	-0.3
1,769,757	+		DZA65_RS08385	0.87	-0.2
1,769,767	+		DZA65_RS08385	0.88	-1.6
1,769,883	+				-0.7
1,769,883	+				+0.1
1,769,883	+				+0.2
1,769,884	-				+1.9
1,769,884	-				+0.8
1,769,884	-				+0.0
1,769,890	+				+1.5
1,769,890	+				+2.6
1,769,906	+				+1.7
1,769,906	+				+1.2
1,769,906	+				-0.6
1,769,907	-				-0.1
1,769,920	-				-0.2