Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08070

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,685,282	+		DZA65_RS08065	0.80	+0.8
1,685,282	+		DZA65_RS08065	0.80	-1.5
1,685,283	-		DZA65_RS08065	0.80	-1.1
1,685,317	+		DZA65_RS08065	0.81	-0.1
1,685,345	+		DZA65_RS08065	0.82	-1.0
1,685,345	+		DZA65_RS08065	0.82	+0.2
1,685,345	+		DZA65_RS08065	0.82	+0.0
1,685,346	-		DZA65_RS08065	0.82	-1.1
1,685,346	-		DZA65_RS08065	0.82	+0.1
1,685,346	-		DZA65_RS08065	0.82	-0.8
1,685,346	-		DZA65_RS08065	0.82	-1.9
1,685,346	-		DZA65_RS08065	0.82	+0.7
1,685,346	-		DZA65_RS08065	0.82	+0.5
1,685,346	-		DZA65_RS08065	0.82	-1.0
1,685,347	+		DZA65_RS08065	0.83	-1.3
1,685,347	+		DZA65_RS08065	0.83	-1.1
1,685,347	+		DZA65_RS08065	0.83	+1.0
1,685,347	+		DZA65_RS08065	0.83	-0.1
1,685,347	+		DZA65_RS08065	0.83	-3.8
1,685,347	+		DZA65_RS08065	0.83	-1.7
1,685,348	-		DZA65_RS08065	0.83	-0.3
1,685,348	-		DZA65_RS08065	0.83	+0.5
1,685,348	-		DZA65_RS08065	0.83	-0.3
1,685,348	-		DZA65_RS08065	0.83	+1.5
1,685,348	-		DZA65_RS08065	0.83	+0.1
1,685,348	-		DZA65_RS08065	0.83	+0.8
1,685,348	-		DZA65_RS08065	0.83	+0.0
1,685,349	+		DZA65_RS08065	0.83	+0.5
1,685,349	+		DZA65_RS08065	0.83	-2.6
1,685,349	+		DZA65_RS08065	0.83	-1.9
1,685,350	-		DZA65_RS08065	0.83	-1.5
1,685,350	-		DZA65_RS08065	0.83	-0.5
1,685,350	-		DZA65_RS08065	0.83	+1.1
1,685,350	-		DZA65_RS08065	0.83	-1.2
1,685,350	-		DZA65_RS08065	0.83	-0.0
1,685,407	+		DZA65_RS08065	0.85	-2.7
1,685,417	+		DZA65_RS08065	0.86	-0.1
1,685,417	+		DZA65_RS08065	0.86	+0.6
1,685,418	-		DZA65_RS08065	0.86	+0.6
1,685,418	-		DZA65_RS08065	0.86	-1.1
1,685,418	-		DZA65_RS08065	0.86	+0.1
1,685,418	-		DZA65_RS08065	0.86	-0.3
1,685,418	-		DZA65_RS08065	0.86	+0.7
1,685,418	-		DZA65_RS08065	0.86	+0.0
1,685,418	-		DZA65_RS08065	0.86	-0.1
1,685,418	-		DZA65_RS08065	0.86	-0.4
1,685,418	-		DZA65_RS08065	0.86	+0.7
1,685,418	-		DZA65_RS08065	0.86	-0.5
1,685,453	-		DZA65_RS08065	0.87	-0.1
1,685,542	+				-0.4
1,685,542	+				-1.1
1,685,543	-				+0.5
1,685,543	-				+0.7
1,685,543	-				+0.0
1,685,563	+				+1.6
1,685,564	-				+0.1
1,685,564	-				-1.1
1,685,567	+				-0.1
1,685,568	-				-2.5
1,685,568	-				-0.7
1,685,568	-				-0.2
1,685,671	+				-0.5
1,685,699	+				-2.3
1,685,700	-				-2.1
1,685,721	-				+1.1
1,685,769	+				+0.2
1,685,770	-				-0.1
1,685,801	+				-0.0
1,685,804	-				+0.5
1,685,929	+				+1.2
1,686,023	+				+1.5
1,686,088	+				+0.5
1,686,088	+				+0.0
1,686,088	+				+1.5
1,686,089	-				+0.7
1,686,089	-				-0.7
1,686,089	-				+0.7
1,686,103	+				+1.1
1,686,103	+				-0.5
1,686,135	+				-0.1
1,686,163	+				-1.1
1,686,163	+				-0.9
1,686,163	+				+1.0
1,686,163	+				+1.5
1,686,163	+				-1.4
1,686,167	+				-0.0
1,686,184	+				+0.4
1,686,184	+				-0.1
1,686,279	+				-1.1
1,686,279	+				+1.7
1,686,279	+				+1.8
1,686,279	+				+0.2
1,686,280	-				+0.0
1,686,280	-				+0.0
1,686,280	-				-2.0
1,686,280	-				-1.5
1,686,280	-				-1.5
1,686,280	-				+0.7
1,686,356	+				-0.9
1,686,356	+				-1.3
1,686,356	+				+0.9
1,686,356	+				+1.0
1,686,356	+				+0.5
1,686,356	+				+0.1
1,686,357	-				-1.1
1,686,357	-				-1.1
1,686,357	-				+1.0
1,686,357	-				+0.9
1,686,357	-				+1.3
1,686,357	-				+0.5
1,686,357	-				-0.0
1,686,357	-				-1.5
1,686,436	+		DZA65_RS08070	0.13	-1.5
1,686,437	-		DZA65_RS08070	0.13	+2.6
1,686,480	+		DZA65_RS08070	0.16	+2.3
1,686,540	+		DZA65_RS08070	0.20	+1.5
1,686,540	+		DZA65_RS08070	0.20	-2.5
1,686,540	+		DZA65_RS08070	0.20	+1.0
1,686,540	+		DZA65_RS08070	0.20	+0.2
1,686,540	+		DZA65_RS08070	0.20	+0.2
1,686,541	-		DZA65_RS08070	0.20	+0.6
1,686,541	-		DZA65_RS08070	0.20	-0.3
1,686,541	-		DZA65_RS08070	0.20	+1.0
1,686,541	-		DZA65_RS08070	0.20	+0.6
1,686,541	-		DZA65_RS08070	0.20	-0.5
1,686,541	-		DZA65_RS08070	0.20	+1.6
1,686,541	-		DZA65_RS08070	0.20	+0.3
1,686,541	-		DZA65_RS08070	0.20	-1.9
1,686,541	-		DZA65_RS08070	0.20	-1.1
1,686,620	-		DZA65_RS08070	0.26	-1.5
1,686,620	-		DZA65_RS08070	0.26	-0.4
1,686,688	+		DZA65_RS08070	0.31	+0.4
1,686,689	-		DZA65_RS08070	0.31	-0.1
1,686,727	+		DZA65_RS08070	0.34	+0.5
1,686,835	+		DZA65_RS08070	0.41	+1.3
1,686,872	+		DZA65_RS08070	0.44	-1.1
1,686,873	-		DZA65_RS08070	0.44	+1.2
1,686,890	-		DZA65_RS08070	0.45	-1.0
1,686,890	-		DZA65_RS08070	0.45	-2.3
1,686,890	-		DZA65_RS08070	0.45	+1.3
1,687,338	+		DZA65_RS08070	0.77	+1.3
1,687,563	+				-1.3
1,687,589	+				-0.2
1,687,729	+				+0.7
1,687,729	+				-1.7
1,687,803	-				+0.5
1,687,834	+				+1.0
1,687,834	+				+0.2
1,687,834	+				+0.8
1,687,834	+				+1.3
1,687,835	-				+1.4
1,687,837	-				-0.1
1,687,837	-				+0.7
1,687,883	+				-1.7
1,687,884	-				+0.5
1,687,977	-				-2.3
1,688,026	+				-0.4
1,688,027	-				+0.8
1,688,033	+		DZA65_RS08075	0.10	-0.8
1,688,126	+		DZA65_RS08075	0.15	+1.8
1,688,126	+		DZA65_RS08075	0.15	+1.5
1,688,127	-		DZA65_RS08075	0.15	+0.1
1,688,127	-		DZA65_RS08075	0.15	-1.5
1,688,127	-		DZA65_RS08075	0.15	+0.2
1,688,261	+		DZA65_RS08075	0.21	+0.4
1,688,261	+		DZA65_RS08075	0.21	-2.5
1,688,261	+		DZA65_RS08075	0.21	+1.5
1,688,262	-		DZA65_RS08075	0.21	+0.2
1,688,262	-		DZA65_RS08075	0.21	+1.0
1,688,264	+		DZA65_RS08075	0.21	-0.5
1,688,264	+		DZA65_RS08075	0.21	-0.9
1,688,264	+		DZA65_RS08075	0.21	+0.7
1,688,265	-		DZA65_RS08075	0.21	+0.1
1,688,265	-		DZA65_RS08075	0.21	+1.5
1,688,265	-		DZA65_RS08075	0.21	-0.5
1,688,355	+		DZA65_RS08075	0.25	+0.6
1,688,368	-		DZA65_RS08075	0.26	+1.2
1,688,400	+		DZA65_RS08075	0.28	-1.9
1,688,419	-		DZA65_RS08075	0.28	+1.0
1,688,419	-		DZA65_RS08075	0.28	-1.1
1,688,472	-		DZA65_RS08075	0.31	-0.0
1,688,472	-		DZA65_RS08075	0.31	+1.0
1,688,567	+		DZA65_RS08075	0.35	-0.3
1,688,598	+		DZA65_RS08075	0.37	+0.3
1,688,598	+		DZA65_RS08075	0.37	+0.6
1,688,598	+		DZA65_RS08075	0.37	+0.3
1,688,598	+				-1.1
1,688,598	+		DZA65_RS08075	0.37	-0.4
1,688,598	+		DZA65_RS08075	0.37	-0.1
1,688,598	+		DZA65_RS08075	0.37	+0.1
1,688,599	-		DZA65_RS08075	0.37	-1.5
1,688,599	-		DZA65_RS08075	0.37	-2.3
1,688,599	-		DZA65_RS08075	0.37	+0.3
1,688,599	-		DZA65_RS08075	0.37	+1.0
1,688,599	-		DZA65_RS08075	0.37	+0.9
1,688,602	+		DZA65_RS08075	0.37	+0.1
1,688,602	+		DZA65_RS08075	0.37	+1.5
1,688,603	-		DZA65_RS08075	0.37	+1.2
1,688,603	-		DZA65_RS08075	0.37	-0.2
1,688,603	-		DZA65_RS08075	0.37	+0.6
1,688,621	+		DZA65_RS08075	0.38	+0.9