Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08060

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,681,824	+		DZA65_RS08055	0.43	-1.1
1,681,824	+		DZA65_RS08055	0.43	-0.2
1,681,825	-		DZA65_RS08055	0.43	+0.5
1,682,052	+		DZA65_RS08055	0.57	+0.8
1,682,052	+		DZA65_RS08055	0.57	-0.2
1,682,269	-		DZA65_RS08055	0.69	-0.0
1,682,300	+		DZA65_RS08055	0.71	-0.8
1,682,301	-		DZA65_RS08055	0.71	-3.2
1,682,301	-		DZA65_RS08055	0.71	+2.5
1,682,301	-		DZA65_RS08055	0.71	+0.9
1,682,334	-		DZA65_RS08055	0.73	-0.2
1,682,406	+		DZA65_RS08055	0.77	+0.5
1,682,415	+		DZA65_RS08055	0.77	-1.4
1,682,415	+		DZA65_RS08055	0.77	-2.3
1,682,416	-		DZA65_RS08055	0.77	-1.0
1,682,485	+		DZA65_RS08055	0.81	-0.1
1,682,485	+		DZA65_RS08055	0.81	-0.5
1,682,485	+		DZA65_RS08055	0.81	-0.7
1,682,486	-		DZA65_RS08055	0.81	+0.9
1,682,530	+		DZA65_RS08055	0.84	+0.2
1,682,547	+		DZA65_RS08055	0.85	+0.3
1,682,547	+		DZA65_RS08055	0.85	-0.5
1,682,547	+		DZA65_RS08055	0.85	+0.8
1,682,547	+		DZA65_RS08055	0.85	+1.6
1,682,547	+		DZA65_RS08055	0.85	+1.0
1,682,547	+		DZA65_RS08055	0.85	+1.5
1,682,547	+		DZA65_RS08055	0.85	-0.9
1,682,547	+		DZA65_RS08055	0.85	-0.5
1,682,548	-		DZA65_RS08055	0.85	-0.7
1,682,548	-		DZA65_RS08055	0.85	+0.5
1,682,548	-		DZA65_RS08055	0.85	+0.5
1,682,548	-		DZA65_RS08055	0.85	+0.2
1,682,548	-		DZA65_RS08055	0.85	-1.5
1,682,548	-		DZA65_RS08055	0.85	+0.5
1,682,701	+				-0.1
1,682,701	+				-0.8
1,682,702	-				-0.4
1,682,702	-				+0.5
1,682,781	+				-0.0
1,682,784	+				+0.0
1,682,784	+				-0.4
1,682,785	-				-1.0
1,682,793	-				-3.1
1,682,793	-				-0.3
1,682,906	+				-0.5
1,682,906	+		DZA65_RS08060	0.15	-1.5
1,682,906	+		DZA65_RS08060	0.15	+0.2
1,682,907	-		DZA65_RS08060	0.15	-1.7
1,682,907	-		DZA65_RS08060	0.15	+0.0
1,682,907	-		DZA65_RS08060	0.15	-3.0
1,682,918	+		DZA65_RS08060	0.17	-0.3
1,682,918	+		DZA65_RS08060	0.17	+1.0
1,682,918	+		DZA65_RS08060	0.17	+0.2
1,682,919	-		DZA65_RS08060	0.17	-0.3
1,682,919	-		DZA65_RS08060	0.17	+1.2
1,682,919	-		DZA65_RS08060	0.17	-0.4
1,682,919	-		DZA65_RS08060	0.17	-1.5
1,683,020	+		DZA65_RS08060	0.32	+0.3
1,683,021	-		DZA65_RS08060	0.32	+0.5
1,683,033	+		DZA65_RS08060	0.34	+0.8
1,683,033	+		DZA65_RS08060	0.34	+0.5
1,683,033	+		DZA65_RS08060	0.34	-2.5
1,683,033	+		DZA65_RS08060	0.34	+0.5
1,683,033	+		DZA65_RS08060	0.34	-0.3
1,683,033	+		DZA65_RS08060	0.34	+0.2
1,683,033	+		DZA65_RS08060	0.34	-1.9
1,683,033	+		DZA65_RS08060	0.34	+0.5
1,683,034	-		DZA65_RS08060	0.34	-2.1
1,683,034	-				+1.5
1,683,034	-		DZA65_RS08060	0.34	-0.7
1,683,034	-		DZA65_RS08060	0.34	-2.1
1,683,034	-		DZA65_RS08060	0.34	+0.2
1,683,034	-		DZA65_RS08060	0.34	-0.5
1,683,034	-		DZA65_RS08060	0.34	+1.5
1,683,034	-		DZA65_RS08060	0.34	-0.2
1,683,034	-		DZA65_RS08060	0.34	+2.0
1,683,191	+		DZA65_RS08060	0.58	-2.1
1,683,191	+		DZA65_RS08060	0.58	-0.5
1,683,191	+		DZA65_RS08060	0.58	+0.0
1,683,191	+		DZA65_RS08060	0.58	-0.1
1,683,192	-		DZA65_RS08060	0.58	-1.4
1,683,192	-		DZA65_RS08060	0.58	-0.6
1,683,192	-		DZA65_RS08060	0.58	-0.8
1,683,192	-		DZA65_RS08060	0.58	-0.9
1,683,235	+		DZA65_RS08060	0.65	-1.1
1,683,309	+		DZA65_RS08060	0.76	-0.7
1,683,309	+		DZA65_RS08060	0.76	-0.7
1,683,309	+		DZA65_RS08060	0.76	-0.9
1,683,309	+		DZA65_RS08060	0.76	-1.9
1,683,309	+		DZA65_RS08060	0.76	+1.5
1,683,309	+		DZA65_RS08060	0.76	-1.1
1,683,309	+		DZA65_RS08060	0.76	-1.5
1,683,309	+		DZA65_RS08060	0.76	-2.9
1,683,309	+		DZA65_RS08060	0.76	-0.2
1,683,310	-		DZA65_RS08060	0.76	-0.4
1,683,310	-		DZA65_RS08060	0.76	+0.7
1,683,310	-		DZA65_RS08060	0.76	+0.8
1,683,348	+		DZA65_RS08060	0.82	-1.5
1,683,348	+		DZA65_RS08060	0.82	-0.3
1,683,360	+		DZA65_RS08060	0.84	-0.4
1,683,392	+		DZA65_RS08060	0.88	+1.1
1,683,392	+		DZA65_RS08060	0.88	+1.7
1,683,392	+		DZA65_RS08060	0.88	-2.3
1,683,392	+		DZA65_RS08060	0.88	+2.0
1,683,392	+		DZA65_RS08060	0.88	+0.5
1,683,392	+		DZA65_RS08060	0.88	-0.3
1,683,392	+		DZA65_RS08060	0.88	-0.5
1,683,392	+		DZA65_RS08060	0.88	-1.9
1,683,392	+		DZA65_RS08060	0.88	+0.8
1,683,393	-		DZA65_RS08060	0.89	+1.1
1,683,393	-		DZA65_RS08060	0.89	+0.5
1,683,393	-		DZA65_RS08060	0.89	+0.0
1,683,393	-		DZA65_RS08060	0.89	+0.5
1,683,393	-		DZA65_RS08060	0.89	-1.1
1,683,393	-		DZA65_RS08060	0.89	-0.5
1,683,393	-		DZA65_RS08060	0.89	-0.6
1,683,393	-		DZA65_RS08060	0.89	+0.9
1,683,427	-				-0.4
1,683,525	+				+1.7
1,683,544	+				+0.2
1,683,545	-				+0.5
1,683,559	-				+1.0
1,683,559	-				+1.0
1,683,585	+				+1.0
1,683,638	+				+2.0
1,683,638	+				+1.0
1,683,638	+				-0.8
1,683,638	+				+0.7
1,683,640	+				+2.2
1,683,640	+				+0.5
1,683,641	-				-2.5
1,683,641	-				-0.1
1,683,857	+		DZA65_RS08065	0.17	-0.3
1,683,881	+		DZA65_RS08065	0.18	-0.0
1,683,881	+		DZA65_RS08065	0.18	-0.1
1,683,882	-		DZA65_RS08065	0.18	+0.5
1,683,887	+		DZA65_RS08065	0.18	-1.7
1,683,888	-		DZA65_RS08065	0.18	+1.6
1,683,888	-		DZA65_RS08065	0.18	-0.8
1,683,901	+		DZA65_RS08065	0.19	-0.4
1,683,901	+		DZA65_RS08065	0.19	-0.2
1,683,901	+		DZA65_RS08065	0.19	+0.5
1,683,901	+		DZA65_RS08065	0.19	-0.1
1,683,901	+		DZA65_RS08065	0.19	-0.6
1,683,902	-				-0.5
1,683,902	-		DZA65_RS08065	0.19	+3.3
1,683,902	-		DZA65_RS08065	0.19	-0.5
1,683,965	+		DZA65_RS08065	0.21	-1.1
1,683,965	+		DZA65_RS08065	0.21	-1.7
1,683,965	+		DZA65_RS08065	0.21	-1.6
1,683,965	+		DZA65_RS08065	0.21	-0.4
1,683,965	+		DZA65_RS08065	0.21	+0.9
1,683,965	+		DZA65_RS08065	0.21	+0.1
1,683,984	+		DZA65_RS08065	0.22	+0.8
1,683,984	+		DZA65_RS08065	0.22	-0.2
1,683,984	+		DZA65_RS08065	0.22	+1.2
1,683,984	+		DZA65_RS08065	0.22	-0.5
1,683,984	+		DZA65_RS08065	0.22	-0.3
1,683,984	+		DZA65_RS08065	0.22	-1.5
1,683,984	+		DZA65_RS08065	0.22	-0.9
1,683,984	+		DZA65_RS08065	0.22	+0.3
1,683,985	-		DZA65_RS08065	0.22	+0.9
1,683,985	-		DZA65_RS08065	0.22	-0.2
1,683,985	-		DZA65_RS08065	0.22	-0.3
1,683,985	-		DZA65_RS08065	0.22	+1.9
1,683,985	-		DZA65_RS08065	0.22	-1.3
1,683,985	-		DZA65_RS08065	0.22	-1.8
1,684,016	+		DZA65_RS08065	0.24	-1.3
1,684,044	+		DZA65_RS08065	0.25	-0.1
1,684,224	-		DZA65_RS08065	0.33	-2.2
1,684,224	-		DZA65_RS08065	0.33	+0.9
1,684,224	-		DZA65_RS08065	0.33	-0.5
1,684,300	+		DZA65_RS08065	0.36	-1.3
1,684,301	-		DZA65_RS08065	0.36	-1.4
1,684,464	+				+0.9
1,684,464	+		DZA65_RS08065	0.44	+1.0
1,684,464	+		DZA65_RS08065	0.44	+1.5
1,684,465	-		DZA65_RS08065	0.44	-0.3
1,684,465	-		DZA65_RS08065	0.44	+0.0
1,684,465	-		DZA65_RS08065	0.44	+1.2
1,684,465	-		DZA65_RS08065	0.44	+0.5
1,684,465	-		DZA65_RS08065	0.44	+0.2
1,684,465	-		DZA65_RS08065	0.44	-0.8