Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07850

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,636,125	+		DZA65_RS07845	0.35	+1.5
1,636,125	+		DZA65_RS07845	0.35	+0.7
1,636,125	+		DZA65_RS07845	0.35	+0.2
1,636,125	+		DZA65_RS07845	0.35	+0.1
1,636,125	+		DZA65_RS07845	0.35	-0.9
1,636,125	+		DZA65_RS07845	0.35	+0.5
1,636,125	+		DZA65_RS07845	0.35	+1.1
1,636,125	+		DZA65_RS07845	0.35	-0.2
1,636,125	+		DZA65_RS07845	0.35	+1.5
1,636,126	-		DZA65_RS07845	0.36	-0.6
1,636,126	-		DZA65_RS07845	0.36	+0.8
1,636,126	-		DZA65_RS07845	0.36	-2.1
1,636,126	-		DZA65_RS07845	0.36	+0.1
1,636,126	-		DZA65_RS07845	0.36	+0.5
1,636,126	-		DZA65_RS07845	0.36	-0.5
1,636,126	-		DZA65_RS07845	0.36	+0.3
1,636,126	-		DZA65_RS07845	0.36	+0.5
1,636,126	-		DZA65_RS07845	0.36	-2.1
1,636,126	-		DZA65_RS07845	0.36	+1.4
1,636,149	+		DZA65_RS07845	0.37	-0.3
1,636,149	+		DZA65_RS07845	0.37	+1.0
1,636,150	-		DZA65_RS07845	0.37	-0.2
1,636,150	-		DZA65_RS07845	0.37	+0.5
1,636,168	+		DZA65_RS07845	0.38	+0.2
1,636,168	+		DZA65_RS07845	0.38	+0.5
1,636,168	+		DZA65_RS07845	0.38	-1.2
1,636,169	-		DZA65_RS07845	0.39	-1.3
1,636,185	+		DZA65_RS07845	0.40	+0.7
1,636,186	-		DZA65_RS07845	0.40	-1.1
1,636,186	-		DZA65_RS07845	0.40	-3.1
1,636,186	-		DZA65_RS07845	0.40	-1.5
1,636,186	-		DZA65_RS07845	0.40	+0.1
1,636,186	-				+2.1
1,636,186	-		DZA65_RS07845	0.40	+0.9
1,636,200	+		DZA65_RS07845	0.41	-0.1
1,636,201	-		DZA65_RS07845	0.41	-1.5
1,636,210	+		DZA65_RS07845	0.41	-1.1
1,636,210	+		DZA65_RS07845	0.41	+0.4
1,636,211	-		DZA65_RS07845	0.41	-1.8
1,636,288	+		DZA65_RS07845	0.47	-0.5
1,636,289	-		DZA65_RS07845	0.47	-0.2
1,636,289	-		DZA65_RS07845	0.47	-1.4
1,636,291	-		DZA65_RS07845	0.47	-1.3
1,636,515	+		DZA65_RS07845	0.63	+0.5
1,636,515	+		DZA65_RS07845	0.63	-0.2
1,636,515	+		DZA65_RS07845	0.63	-0.3
1,636,516	-		DZA65_RS07845	0.63	+1.0
1,636,587	+		DZA65_RS07845	0.68	-0.5
1,636,587	+		DZA65_RS07845	0.68	+0.3
1,636,588	-		DZA65_RS07845	0.68	-1.9
1,636,590	+		DZA65_RS07845	0.68	+0.1
1,636,707	+		DZA65_RS07845	0.76	-0.7
1,636,708	-		DZA65_RS07845	0.76	-0.9
1,636,710	+		DZA65_RS07845	0.76	-0.4
1,636,710	+		DZA65_RS07845	0.76	+0.2
1,636,770	+		DZA65_RS07845	0.80	-1.3
1,636,771	-		DZA65_RS07845	0.80	-1.0
1,636,811	+		DZA65_RS07845	0.83	-0.4
1,636,811	+		DZA65_RS07845	0.83	+3.3
1,636,812	-		DZA65_RS07845	0.83	-0.1
1,636,812	-		DZA65_RS07845	0.83	+1.0
1,636,812	-		DZA65_RS07845	0.83	-0.7
1,636,955	+				-3.0
1,636,964	+				-1.8
1,636,964	+				+1.4
1,636,965	-				+0.4
1,637,045	-				+1.3
1,637,045	-				+0.5
1,637,071	+				-3.0
1,637,071	+				-0.2
1,637,071	+				-1.8
1,637,071	+				+0.8
1,637,071	+				+1.7
1,637,071	+				-1.8
1,637,071	+				-0.5
1,637,072	-				+1.3
1,637,072	-				+0.2
1,637,072	-				+0.5
1,637,072	-				+0.1
1,637,072	-				-0.1
1,637,072	-				-0.7
1,637,072	-				-0.6
1,637,072	-				-2.7
1,637,072	-				+0.5
1,637,073	+				-2.1
1,637,074	-				-0.0
1,637,285	+		DZA65_RS07850	0.23	+0.5
1,637,285	+		DZA65_RS07850	0.23	+0.4
1,637,285	+		DZA65_RS07850	0.23	+0.1
1,637,286	-		DZA65_RS07850	0.23	+0.2
1,637,286	-		DZA65_RS07850	0.23	-0.2
1,637,286	-		DZA65_RS07850	0.23	+0.5
1,637,362	+		DZA65_RS07850	0.31	-1.5
1,637,363	-		DZA65_RS07850	0.31	+0.2
1,637,692	+		DZA65_RS07850	0.66	+1.4
1,637,692	+		DZA65_RS07850	0.66	+2.8
1,637,692	+		DZA65_RS07850	0.66	+0.0
1,637,692	+		DZA65_RS07850	0.66	+1.0
1,637,693	-		DZA65_RS07850	0.66	-0.0
1,637,869	+		DZA65_RS07850	0.84	+0.3
1,637,938	-				-1.1
1,638,010	+				-1.0
1,638,010	+				-2.1
1,638,010	+				+0.8
1,638,010	+				+0.0
1,638,010	+				+0.5
1,638,011	-				-1.1
1,638,011	-				+0.5
1,638,011	-				-0.5
1,638,011	-				+2.0
1,638,011	-				+0.5
1,638,032	-				+0.8
1,638,042	-				-0.3
1,638,042	-				-1.0
1,638,076	+				+2.1
1,638,076	+				-1.3
1,638,076	+				-1.1
1,638,076	+				-0.8
1,638,076	+				+1.1
1,638,076	+				+2.3
1,638,076	+				-1.4
1,638,076	+				+1.0
1,638,076	+				+0.7
1,638,076	+				-1.2
1,638,077	-				+1.5
1,638,077	-				-2.5
1,638,077	-				-1.0
1,638,077	-				+1.0
1,638,085	+				+0.7
1,638,085	+				-0.1
1,638,085	+				-2.0
1,638,085	+				+0.5
1,638,085	+				-0.1
1,638,085	+				-0.2
1,638,086	-				+0.5
1,638,086	-				+0.1
1,638,086	-				+0.6
1,638,086	-				-0.9
1,638,086	-				-0.3
1,638,178	-				-0.3
1,638,259	-		DZA65_RS07855	0.11	-2.1
1,638,265	+		DZA65_RS07855	0.12	-0.5
1,638,265	+		DZA65_RS07855	0.12	-1.3
1,638,266	-		DZA65_RS07855	0.12	-0.8
1,638,334	+		DZA65_RS07855	0.15	+0.1
1,638,403	+		DZA65_RS07855	0.18	-0.7
1,638,403	+		DZA65_RS07855	0.18	-0.3
1,638,403	+		DZA65_RS07855	0.18	+0.5
1,638,404	-		DZA65_RS07855	0.18	+1.7
1,638,527	+		DZA65_RS07855	0.24	+0.0
1,638,616	-		DZA65_RS07855	0.29	+0.8
1,638,616	-		DZA65_RS07855	0.29	-0.8
1,638,820	+		DZA65_RS07855	0.39	-1.3
1,638,820	+		DZA65_RS07855	0.39	+1.2
1,638,821	-		DZA65_RS07855	0.39	-1.8
1,638,824	+		DZA65_RS07855	0.39	-1.2
1,638,825	-		DZA65_RS07855	0.39	+0.6
1,638,825	-		DZA65_RS07855	0.39	-1.7
1,638,825	-		DZA65_RS07855	0.39	+0.2
1,638,825	-		DZA65_RS07855	0.39	+0.5
1,638,961	+		DZA65_RS07855	0.46	+0.7
1,638,961	+		DZA65_RS07855	0.46	+1.1
1,638,961	+		DZA65_RS07855	0.46	-1.8
1,638,965	+		DZA65_RS07855	0.46	+0.3
1,638,965	+		DZA65_RS07855	0.46	+0.8
1,638,965	+		DZA65_RS07855	0.46	+1.7
1,638,965	+		DZA65_RS07855	0.46	+1.2
1,638,965	+		DZA65_RS07855	0.46	-0.6
1,638,965	+		DZA65_RS07855	0.46	-0.4
1,638,965	+		DZA65_RS07855	0.46	+0.3
1,638,965	+		DZA65_RS07855	0.46	-0.4
1,638,966	-		DZA65_RS07855	0.46	-1.6
1,638,966	-		DZA65_RS07855	0.46	-1.8
1,638,966	-		DZA65_RS07855	0.46	+0.5
1,638,966	-		DZA65_RS07855	0.46	+0.6
1,638,966	-		DZA65_RS07855	0.46	-0.9
1,638,966	-		DZA65_RS07855	0.46	+0.0
1,638,966	-		DZA65_RS07855	0.46	+0.3
1,638,966	-		DZA65_RS07855	0.46	-0.3
1,638,966	-		DZA65_RS07855	0.46	+0.3
1,638,966	-		DZA65_RS07855	0.46	+0.1