Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07515

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,560,073	+				-1.5
1,560,074	-				+0.7
1,560,074	-				-0.5
1,560,077	-				+0.5
1,560,096	+		DZA65_RS07505	0.17	-0.5
1,560,108	+		DZA65_RS07505	0.24	-0.4
1,560,109	-		DZA65_RS07505	0.25	-0.7
1,560,109	-		DZA65_RS07505	0.25	+0.5
1,560,118	-		DZA65_RS07505	0.30	+0.2
1,560,128	+		DZA65_RS07505	0.36	-1.6
1,560,128	+		DZA65_RS07505	0.36	+0.6
1,560,128	+		DZA65_RS07505	0.36	+2.3
1,560,129	-		DZA65_RS07505	0.37	+2.4
1,560,129	-		DZA65_RS07505	0.37	+0.4
1,560,129	-		DZA65_RS07505	0.37	+0.5
1,560,151	+		DZA65_RS07505	0.50	-0.3
1,560,152	-		DZA65_RS07505	0.51	+0.0
1,560,177	-		DZA65_RS07505	0.66	-0.0
1,560,244	+				+0.9
1,560,244	+				+1.5
1,560,245	-				+2.5
1,560,275	-				+1.0
1,560,279	+				-1.6
1,560,279	+				+0.7
1,560,280	-				+0.5
1,560,280	-				+1.5
1,560,280	-				-1.6
1,560,296	+				-0.2
1,560,301	-				-2.6
1,560,301	-				+0.9
1,560,319	+		DZA65_RS07510	0.10	+1.5
1,560,322	-		DZA65_RS07510	0.11	+1.1
1,560,322	-		DZA65_RS07510	0.11	-1.0
1,560,322	-		DZA65_RS07510	0.11	+0.3
1,560,388	+		DZA65_RS07510	0.18	+1.0
1,560,388	+		DZA65_RS07510	0.18	-0.4
1,560,388	+		DZA65_RS07510	0.18	-0.1
1,560,389	-		DZA65_RS07510	0.19	+0.4
1,560,389	-		DZA65_RS07510	0.19	+1.1
1,560,453	-		DZA65_RS07510	0.26	+0.2
1,560,495	+		DZA65_RS07510	0.31	-0.3
1,560,496	-		DZA65_RS07510	0.32	-0.1
1,560,501	-		DZA65_RS07510	0.32	+0.3
1,560,504	-		DZA65_RS07510	0.32	+0.1
1,560,519	+		DZA65_RS07510	0.34	-1.3
1,560,524	+		DZA65_RS07510	0.35	+1.0
1,560,525	-		DZA65_RS07510	0.35	-3.0
1,560,659	+		DZA65_RS07510	0.51	+0.0
1,560,669	+		DZA65_RS07510	0.52	-1.2
1,560,672	+		DZA65_RS07510	0.53	-0.8
1,560,672	+		DZA65_RS07510	0.53	-0.8
1,560,673	-		DZA65_RS07510	0.53	-0.8
1,560,719	+		DZA65_RS07510	0.58	-0.8
1,560,720	-				+0.5
1,560,720	-		DZA65_RS07510	0.59	+0.5
1,560,756	+		DZA65_RS07510	0.63	-1.5
1,560,757	-		DZA65_RS07510	0.63	+0.1
1,560,760	-		DZA65_RS07510	0.63	-1.0
1,560,808	-		DZA65_RS07510	0.69	-0.5
1,560,966	+		DZA65_RS07510	0.88	-0.1
1,560,988	+				-0.5
1,560,988	+				-0.1
1,560,988	+				-1.6
1,560,989	-				+0.4
1,560,989	-				-0.5
1,560,989	-				+0.8
1,560,989	-				+1.0
1,561,032	+				+0.5
1,561,032	+				+0.2
1,561,036	+				+0.5
1,561,039	+				+1.4
1,561,039	+				-0.5
1,561,040	-				-2.5
1,561,075	+				+1.0
1,561,075	+				+0.4
1,561,136	-				+0.0
1,561,136	-				+1.8
1,561,137	+				+0.5
1,561,142	+				+0.0
1,561,193	+		DZA65_RS07515	0.11	-0.7
1,561,193	+		DZA65_RS07515	0.11	+0.0
1,561,193	+		DZA65_RS07515	0.11	-2.2
1,561,194	-		DZA65_RS07515	0.11	+0.1
1,561,194	-		DZA65_RS07515	0.11	-1.0
1,561,197	+		DZA65_RS07515	0.12	+0.5
1,561,197	+		DZA65_RS07515	0.12	+1.1
1,561,197	+		DZA65_RS07515	0.12	-2.3
1,561,197	+		DZA65_RS07515	0.12	-0.6
1,561,198	-		DZA65_RS07515	0.12	+0.7
1,561,198	-		DZA65_RS07515	0.12	-1.0
1,561,229	-		DZA65_RS07515	0.14	+0.4
1,561,287	-		DZA65_RS07515	0.19	-1.8
1,561,294	-		DZA65_RS07515	0.20	-0.9
1,561,300	+				-1.0
1,561,300	+		DZA65_RS07515	0.20	-0.2
1,561,301	-		DZA65_RS07515	0.20	-0.4
1,561,343	+		DZA65_RS07515	0.24	-0.7
1,561,345	+		DZA65_RS07515	0.24	+1.3
1,561,345	+		DZA65_RS07515	0.24	-1.3
1,561,345	+		DZA65_RS07515	0.24	-1.5
1,561,346	-		DZA65_RS07515	0.24	-1.8
1,561,346	-		DZA65_RS07515	0.24	-0.3
1,561,346	-		DZA65_RS07515	0.24	+0.9
1,561,414	+		DZA65_RS07515	0.30	+0.1
1,561,414	+		DZA65_RS07515	0.30	-0.4
1,561,414	+		DZA65_RS07515	0.30	+0.0
1,561,414	+		DZA65_RS07515	0.30	-1.0
1,561,414	+		DZA65_RS07515	0.30	+0.3
1,561,415	-		DZA65_RS07515	0.30	-1.5
1,561,415	-		DZA65_RS07515	0.30	-1.0
1,561,430	+		DZA65_RS07515	0.31	+0.5
1,561,431	-		DZA65_RS07515	0.31	+0.1
1,561,431	-		DZA65_RS07515	0.31	-1.8
1,561,526	+		DZA65_RS07515	0.39	-1.5
1,561,526	+		DZA65_RS07515	0.39	-2.3
1,561,587	+		DZA65_RS07515	0.44	-0.2
1,561,598	-		DZA65_RS07515	0.45	+0.1
1,561,629	+		DZA65_RS07515	0.48	-0.2
1,561,629	+		DZA65_RS07515	0.48	+1.1
1,561,629	+		DZA65_RS07515	0.48	-0.8
1,561,629	+		DZA65_RS07515	0.48	-1.2
1,561,630	-		DZA65_RS07515	0.48	-0.9
1,561,630	-		DZA65_RS07515	0.48	+0.5
1,561,636	+		DZA65_RS07515	0.48	-1.2
1,561,636	+		DZA65_RS07515	0.48	-0.7
1,561,636	+				+1.3
1,561,689	+		DZA65_RS07515	0.53	+1.6
1,561,689	+		DZA65_RS07515	0.53	+0.3
1,561,690	-		DZA65_RS07515	0.53	+0.6
1,561,690	-		DZA65_RS07515	0.53	-1.3
1,561,690	-		DZA65_RS07515	0.53	-1.3
1,561,690	-		DZA65_RS07515	0.53	-0.1
1,561,690	-		DZA65_RS07515	0.53	-0.5
1,561,690	-		DZA65_RS07515	0.53	-1.5
1,561,712	-		DZA65_RS07515	0.55	+2.0
1,561,712	-		DZA65_RS07515	0.55	-0.5
1,561,712	-		DZA65_RS07515	0.55	+1.3
1,561,712	-		DZA65_RS07515	0.55	+1.1
1,561,726	+		DZA65_RS07515	0.56	-1.0
1,561,726	+		DZA65_RS07515	0.56	+0.5
1,561,726	+		DZA65_RS07515	0.56	-1.0
1,561,727	-		DZA65_RS07515	0.56	+0.5
1,561,727	-		DZA65_RS07515	0.56	-0.9
1,561,773	+		DZA65_RS07515	0.60	-0.2
1,561,773	+		DZA65_RS07515	0.60	-0.5
1,561,775	+		DZA65_RS07515	0.60	+1.1
1,561,775	+		DZA65_RS07515	0.60	+1.1
1,561,775	+		DZA65_RS07515	0.60	+0.3
1,561,776	-		DZA65_RS07515	0.60	-0.4
1,561,776	-		DZA65_RS07515	0.60	+1.2
1,561,787	-		DZA65_RS07515	0.61	+0.1
1,561,787	-		DZA65_RS07515	0.61	-2.6
1,561,854	+		DZA65_RS07515	0.66	+0.2
1,561,854	+		DZA65_RS07515	0.66	-0.2
1,561,855	-		DZA65_RS07515	0.66	-0.4
1,561,868	+		DZA65_RS07515	0.68	+1.3
1,561,869	-		DZA65_RS07515	0.68	-1.8
1,561,869	-		DZA65_RS07515	0.68	+0.8
1,561,890	+		DZA65_RS07515	0.69	-0.8
1,561,890	+		DZA65_RS07515	0.69	-0.0
1,561,890	+		DZA65_RS07515	0.69	-1.8
1,561,891	-		DZA65_RS07515	0.70	+0.1
1,561,891	-		DZA65_RS07515	0.70	+0.5
1,561,891	-		DZA65_RS07515	0.70	-0.3
1,561,892	+		DZA65_RS07515	0.70	-0.3
1,561,893	-		DZA65_RS07515	0.70	-1.2
1,561,893	-		DZA65_RS07515	0.70	-0.8
1,561,910	+		DZA65_RS07515	0.71	-2.0
1,561,931	-		DZA65_RS07515	0.73	-0.5
1,561,945	+		DZA65_RS07515	0.74	+1.5
1,561,950	+		DZA65_RS07515	0.74	-0.7
1,561,950	+		DZA65_RS07515	0.74	+0.3
1,561,951	-		DZA65_RS07515	0.75	+0.2
1,561,951	-		DZA65_RS07515	0.75	+0.5
1,562,016	+		DZA65_RS07515	0.80	-0.3
1,562,016	+		DZA65_RS07515	0.80	+1.0
1,562,016	+		DZA65_RS07515	0.80	+0.7
1,562,016	+		DZA65_RS07515	0.80	-2.5
1,562,016	+		DZA65_RS07515	0.80	-1.5
1,562,016	+		DZA65_RS07515	0.80	-1.0
1,562,016	+		DZA65_RS07515	0.80	-0.3
1,562,016	+		DZA65_RS07515	0.80	+0.5
1,562,017	-		DZA65_RS07515	0.80	-2.2
1,562,017	-		DZA65_RS07515	0.80	-1.0
1,562,017	-		DZA65_RS07515	0.80	-2.3
1,562,017	-		DZA65_RS07515	0.80	-1.5
1,562,017	-		DZA65_RS07515	0.80	-0.9
1,562,017	-				-1.5
1,562,017	-		DZA65_RS07515	0.80	-0.2
1,562,017	-		DZA65_RS07515	0.80	-0.6
1,562,017	-		DZA65_RS07515	0.80	-0.7
1,562,017	-		DZA65_RS07515	0.80	+0.5
1,562,017	-		DZA65_RS07515	0.80	+0.3
1,562,017	-		DZA65_RS07515	0.80	-0.9
1,562,036	+		DZA65_RS07515	0.82	+1.1
1,562,036	+		DZA65_RS07515	0.82	+0.2
1,562,036	+		DZA65_RS07515	0.82	-1.3
1,562,212	+				+0.5
1,562,212	+				-1.5
1,562,225	-				+0.1
1,562,256	+				+1.4
1,562,256	+				+0.4
1,562,257	-				+0.5
1,562,257	-				-0.0
1,562,257	-				-1.0
1,562,391	-		DZA65_RS07520	0.19	+0.7
1,562,391	-		DZA65_RS07520	0.19	+0.5
1,562,411	+		DZA65_RS07520	0.22	+3.5
1,562,411	+		DZA65_RS07520	0.22	-0.5
1,562,411	+		DZA65_RS07520	0.22	+1.8
1,562,412	-		DZA65_RS07520	0.22	-2.6
1,562,412	-		DZA65_RS07520	0.22	+3.7
1,562,412	-		DZA65_RS07520	0.22	+1.7
1,562,412	-		DZA65_RS07520	0.22	+0.2
1,562,412	-		DZA65_RS07520	0.22	-0.5
1,562,434	-		DZA65_RS07520	0.26	-0.2
1,562,434	-		DZA65_RS07520	0.26	-2.5
1,562,440	-		DZA65_RS07520	0.27	+0.1
1,562,459	-		DZA65_RS07520	0.29	-1.0
1,562,512	+		DZA65_RS07520	0.37	-0.1
1,562,512	+		DZA65_RS07520	0.37	-0.0
1,562,512	+		DZA65_RS07520	0.37	+0.3
1,562,513	-		DZA65_RS07520	0.37	-0.4
1,562,513	-		DZA65_RS07520	0.37	-0.8
1,562,513	-		DZA65_RS07520	0.37	+0.8
1,562,513	-		DZA65_RS07520	0.37	+1.5
1,562,513	-		DZA65_RS07520	0.37	-0.8
1,562,515	+		DZA65_RS07520	0.37	+1.0
1,562,515	+		DZA65_RS07520	0.37	+1.5
1,562,515	+		DZA65_RS07520	0.37	-0.6
1,562,516	-		DZA65_RS07520	0.38	+0.1
1,562,516	-		DZA65_RS07520	0.38	+1.0
1,562,527	-		DZA65_RS07520	0.39	-1.2
1,562,610	+		DZA65_RS07520	0.51	+1.0
1,562,611	-		DZA65_RS07520	0.51	-0.5
1,562,663	-		DZA65_RS07520	0.59	-2.0
1,562,672	+		DZA65_RS07520	0.60	-0.2
1,562,672	+		DZA65_RS07520	0.60	+0.1
1,562,672	+		DZA65_RS07520	0.60	-0.1
1,562,673	-		DZA65_RS07520	0.60	+1.1
1,562,686	-		DZA65_RS07520	0.62	+0.5
1,562,719	+		DZA65_RS07520	0.67	-0.8
1,562,720	-		DZA65_RS07520	0.67	-1.3
1,562,720	-		DZA65_RS07520	0.67	+0.8
1,562,720	-		DZA65_RS07520	0.67	-1.2
1,562,721	+		DZA65_RS07520	0.67	-0.0
1,562,722	-		DZA65_RS07520	0.67	-0.3
1,562,746	-		DZA65_RS07520	0.71	-1.0
1,562,746	-		DZA65_RS07520	0.71	-0.0
1,562,756	+		DZA65_RS07520	0.72	-0.5
1,562,757	-		DZA65_RS07520	0.72	-1.5
1,562,786	-		DZA65_RS07520	0.77	+0.8
1,562,786	-		DZA65_RS07520	0.77	+0.1
1,562,786	-		DZA65_RS07520	0.77	+0.8
1,562,786	-		DZA65_RS07520	0.77	-0.3
1,562,786	-		DZA65_RS07520	0.77	-0.0
1,562,845	-		DZA65_RS07520	0.85	+0.2
1,562,860	-		DZA65_RS07520	0.87	+0.8
1,562,878	-				-1.8
1,562,929	-				+0.1
1,562,937	+				-0.2
1,562,938	-				-2.9
1,562,945	-				+0.0
1,562,994	-				+0.5
1,562,994	-				+0.3
1,563,009	-				+1.5
1,563,065	-				-0.6
1,563,120	+		DZA65_RS07525	0.10	+0.4
1,563,120	+		DZA65_RS07525	0.10	-1.8
1,563,145	+		DZA65_RS07525	0.13	-2.0