Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS03525

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
744,046	+		DZA65_RS03520	0.33	+0.3
744,046	+		DZA65_RS03520	0.33	+0.3
744,046	+		DZA65_RS03520	0.33	-0.2
744,046	+		DZA65_RS03520	0.33	-1.0
744,046	+		DZA65_RS03520	0.33	+2.5
744,046	+		DZA65_RS03520	0.33	-1.5
744,046	+		DZA65_RS03520	0.33	+0.5
744,046	+		DZA65_RS03520	0.33	-1.0
744,047	-		DZA65_RS03520	0.33	-1.0
744,047	-		DZA65_RS03520	0.33	+1.9
744,047	-		DZA65_RS03520	0.33	+1.4
744,047	-		DZA65_RS03520	0.33	-0.0
744,060	+		DZA65_RS03520	0.35	-0.1
744,060	+		DZA65_RS03520	0.35	-1.7
744,061	-		DZA65_RS03520	0.35	-0.6
744,096	+		DZA65_RS03520	0.39	+0.8
744,097	-		DZA65_RS03520	0.39	-1.5
744,105	+		DZA65_RS03520	0.40	-0.6
744,105	+		DZA65_RS03520	0.40	+0.9
744,105	+		DZA65_RS03520	0.40	+0.8
744,105	+		DZA65_RS03520	0.40	+0.3
744,105	+		DZA65_RS03520	0.40	-0.1
744,105	+		DZA65_RS03520	0.40	+0.2
744,105	+		DZA65_RS03520	0.40	-0.1
744,105	+		DZA65_RS03520	0.40	+2.5
744,105	+		DZA65_RS03520	0.40	+1.0
744,105	+		DZA65_RS03520	0.40	-2.1
744,105	+		DZA65_RS03520	0.40	+0.5
744,106	-		DZA65_RS03520	0.41	+0.8
744,106	-		DZA65_RS03520	0.41	-0.2
744,106	-				-0.2
744,106	-		DZA65_RS03520	0.41	-2.5
744,106	-		DZA65_RS03520	0.41	+3.1
744,106	-		DZA65_RS03520	0.41	-0.8
744,106	-		DZA65_RS03520	0.41	+1.4
744,106	-		DZA65_RS03520	0.41	-3.2
744,106	-		DZA65_RS03520	0.41	-0.3
744,106	-		DZA65_RS03520	0.41	-1.5
744,120	-		DZA65_RS03520	0.42	+0.2
744,132	-		DZA65_RS03520	0.44	-1.2
744,140	+		DZA65_RS03520	0.45	-2.0
744,140	+		DZA65_RS03520	0.45	-0.3
744,140	+		DZA65_RS03520	0.45	+0.4
744,140	+		DZA65_RS03520	0.45	+0.2
744,140	+		DZA65_RS03520	0.45	-1.8
744,140	+		DZA65_RS03520	0.45	-1.8
744,141	-		DZA65_RS03520	0.45	-0.4
744,141	-		DZA65_RS03520	0.45	-0.4
744,141	-		DZA65_RS03520	0.45	-0.5
744,179	+		DZA65_RS03520	0.50	-3.0
744,179	+		DZA65_RS03520	0.50	-1.2
744,179	+		DZA65_RS03520	0.50	+0.7
744,179	+		DZA65_RS03520	0.50	-0.5
744,179	+		DZA65_RS03520	0.50	+1.4
744,179	+		DZA65_RS03520	0.50	+0.1
744,179	+		DZA65_RS03520	0.50	+2.0
744,179	+		DZA65_RS03520	0.50	+1.3
744,179	+		DZA65_RS03520	0.50	-3.2
744,180	-		DZA65_RS03520	0.50	-1.8
744,180	-		DZA65_RS03520	0.50	+1.2
744,180	-		DZA65_RS03520	0.50	-0.8
744,183	+		DZA65_RS03520	0.51	+4.4
744,183	+		DZA65_RS03520	0.51	+2.8
744,183	+		DZA65_RS03520	0.51	-3.0
744,183	+		DZA65_RS03520	0.51	-0.6
744,184	-		DZA65_RS03520	0.51	+1.6
744,184	-		DZA65_RS03520	0.51	-0.8
744,210	-		DZA65_RS03520	0.54	-0.2
744,218	+		DZA65_RS03520	0.55	-1.3
744,219	-		DZA65_RS03520	0.55	+0.1
744,257	+		DZA65_RS03520	0.60	+2.0
744,257	+		DZA65_RS03520	0.60	-2.3
744,281	+		DZA65_RS03520	0.63	-1.5
744,281	+		DZA65_RS03520	0.63	+1.1
744,282	-		DZA65_RS03520	0.63	+0.7
744,299	-		DZA65_RS03520	0.66	+0.1
744,307	+		DZA65_RS03520	0.67	+2.4
744,307	+		DZA65_RS03520	0.67	+0.7
744,307	+		DZA65_RS03520	0.67	-0.2
744,307	+		DZA65_RS03520	0.67	+0.6
744,308	-		DZA65_RS03520	0.67	+1.5
744,308	-		DZA65_RS03520	0.67	-1.5
744,340	-		DZA65_RS03520	0.71	-0.9
744,348	+		DZA65_RS03520	0.72	-1.5
744,348	+		DZA65_RS03520	0.72	-0.2
744,348	+		DZA65_RS03520	0.72	+0.5
744,348	+		DZA65_RS03520	0.72	+1.0
744,348	+		DZA65_RS03520	0.72	-0.2
744,349	-		DZA65_RS03520	0.72	+0.0
744,349	-		DZA65_RS03520	0.72	-1.2
744,349	-		DZA65_RS03520	0.72	+0.2
744,349	-		DZA65_RS03520	0.72	-1.0
744,349	-		DZA65_RS03520	0.72	-0.2
744,349	-		DZA65_RS03520	0.72	+0.8
744,349	-		DZA65_RS03520	0.72	+1.9
744,354	-		DZA65_RS03520	0.73	-1.2
744,354	-		DZA65_RS03520	0.73	-1.3
744,354	-		DZA65_RS03520	0.73	+0.5
744,370	+		DZA65_RS03520	0.75	+0.1
744,370	+		DZA65_RS03520	0.75	+0.1
744,370	+		DZA65_RS03520	0.75	-0.9
744,371	-		DZA65_RS03520	0.75	-0.0
744,371	-		DZA65_RS03520	0.75	-0.6
744,371	-		DZA65_RS03520	0.75	+0.5
744,371	-		DZA65_RS03520	0.75	-0.6
744,401	+		DZA65_RS03520	0.79	-0.8
744,401	+		DZA65_RS03520	0.79	+1.4
744,401	+		DZA65_RS03520	0.79	+0.4
744,402	-		DZA65_RS03520	0.79	-0.0
744,402	-		DZA65_RS03520	0.79	-0.5
744,402	-		DZA65_RS03520	0.79	+2.0
744,402	-		DZA65_RS03520	0.79	-0.9
744,402	-		DZA65_RS03520	0.79	-0.5
744,402	-		DZA65_RS03520	0.79	+1.4
744,425	+		DZA65_RS03520	0.82	-0.0
744,426	-		DZA65_RS03520	0.82	-0.3
744,426	-		DZA65_RS03520	0.82	-0.2
744,440	+		DZA65_RS03520	0.84	+0.6
744,440	+		DZA65_RS03520	0.84	-0.7
744,440	+		DZA65_RS03520	0.84	-2.0
744,440	+		DZA65_RS03520	0.84	+0.1
744,440	+				+0.8
744,441	-		DZA65_RS03520	0.84	-1.8
744,441	-		DZA65_RS03520	0.84	-0.8
744,441	-		DZA65_RS03520	0.84	-0.2
744,441	-		DZA65_RS03520	0.84	-0.9
744,441	-		DZA65_RS03520	0.84	-0.1
744,462	-		DZA65_RS03520	0.87	+1.2
744,462	-				+0.8
744,462	-		DZA65_RS03520	0.87	+0.2
744,462	-		DZA65_RS03520	0.87	+0.5
744,465	-		DZA65_RS03520	0.87	+0.1
744,465	-		DZA65_RS03520	0.87	-0.1
744,465	-		DZA65_RS03520	0.87	+0.1
744,494	+				-0.2
744,494	+				+1.2
744,494	+				-0.3
744,495	-				-2.3
744,495	-				-0.8
744,495	-				+0.1
744,495	-				-1.5
744,512	+				-2.0
744,513	-				-1.6
744,525	+				+1.6
744,526	-				-0.4
744,526	-				-2.0
744,526	-				-0.6
744,526	-				+0.1
744,573	+				+0.1
744,573	+				-2.5
744,573	+				+1.8
744,573	+				+1.1
744,573	+				-1.3
744,573	+				+1.1
744,573	+				+0.3
744,574	-				+2.1
744,574	-				+0.6
744,574	-				+1.8
744,574	-				+0.9
744,586	+				-0.4
744,586	+				-0.8
744,586	+				+0.3
744,586	+				+2.5
744,587	-				+0.4
744,587	-				-0.8
744,589	+				-0.2
744,589	+				+0.4
744,590	-				+0.1
744,590	-				-2.0
744,590	-				-0.4
744,590	-				-2.0
744,590	-				-0.3
744,590	-				-0.6
744,590	-				+0.2
744,593	+				-0.6
744,593	+				-2.2
744,594	-				+0.7
744,594	-				+1.8
744,594	-				-0.4
744,594	-				-2.2
744,594	-				+0.8
744,606	+				-0.6
744,607	-				+0.3
744,607	-				+0.8
744,607	-				+0.2
744,607	-				-1.5
744,607	-				-1.6
744,614	+				-0.1
744,615	-				+0.5
744,615	-				+2.6
744,615	-				-0.5
744,632	+				-2.3
744,632	+				+0.4
744,739	+				+1.8
744,739	+				+0.7
744,739	+				+1.6
744,739	+				+1.7
744,739	+				-1.8
744,740	-				-0.3
744,740	-				-0.8
744,740	-				-0.8
744,753	+				-0.1
744,754	-				+0.2
744,755	+				+0.2
744,756	-				-0.2
744,756	-				-2.6
744,756	-				-0.2
744,756	-				+2.1
744,782	+				-0.1
744,782	+				+1.2
744,794	+				-0.0
744,804	+				+0.2
744,804	+				-1.0
744,804	+				+0.1
744,805	-				-0.9
744,805	-				+0.5
744,805	-				-0.5
744,805	-				+1.1
744,834	+				+0.0
744,834	+				-0.4
744,834	+				+0.6
744,834	+				-0.6
744,834	+				-1.6
744,834	+				-1.0
744,834	+				-2.5
744,834	+				+0.2
744,834	+				+0.0
744,834	+				-0.9
744,834	+				-1.6
744,834	+				+0.8
744,834	+				-0.5
744,834	+				-0.8
744,834	+				+0.8
744,835	-				+1.1
744,835	-				+0.8
744,835	-				-2.8
744,835	-				+0.9
744,835	-				+1.1
744,835	-				-1.3
744,835	-				-1.2
744,835	-				-1.3
744,835	-				+0.8
744,835	-				-0.2
744,835	-				+1.0
744,835	-				+1.4
744,836	+				+1.1
744,836	+				-0.8
744,836	+				-1.2
744,836	+				+1.1
744,836	+				+1.6
744,836	+				-1.9
744,836	+				-0.1
744,836	+				-1.3
744,836	+				-0.1
744,837	-				-0.8
744,837	-				+0.5
744,837	-				-1.6
744,837	-				+2.4
744,837	-				-0.4
744,837	-				+0.5
744,837	-				-1.3
744,859	+				+0.3
744,859	+				-0.5
744,860	-				+1.2
744,860	-				-1.2
744,860	-				-2.0
744,860	-				+1.7
744,860	-				+0.1
744,879	+				+1.4
744,879	+				+0.1
744,879	+				+0.8
744,879	+				-0.3
744,879	+				+0.7
744,879	+				-0.4
744,880	-				-1.2
744,880	-				+0.0
744,880	-				-1.5
744,880	-				+0.5
744,880	-				-0.1
744,880	-				-0.6
744,883	+				-0.6
744,883	+				-1.5
744,884	-				+0.5
744,884	-				-1.5
744,888	-				-1.5
744,888	-				+1.1
744,922	+				+0.7
744,922	+				+0.6
744,922	+				-2.5
744,925	+				-0.8
744,925	+				-1.2
744,926	-				-2.2
744,926	-				+0.6
744,926	-				+0.6
744,929	+				-0.8
744,929	+				+0.6
744,929	+				+0.5
744,930	-				-2.0
744,930	-				-0.2
744,971	+				+0.0
744,971	+				+0.2
744,972	-				-2.1
745,007	+		DZA65_RS03525	0.39	-0.3
745,008	-		DZA65_RS03525	0.40	-0.8
745,008	-		DZA65_RS03525	0.40	-0.2
745,056	+				-1.9
745,058	+				+0.0
745,058	+				-1.3
745,058	+				+0.7
745,058	+				+2.0
745,059	-				+2.1
745,059	-				-0.3
745,059	-				-0.1
745,059	-				-1.0
745,073	+				-0.2
745,073	+				-0.3
745,073	+				+0.0
745,073	+				-1.0
745,073	+				-0.4
745,074	-				-1.5
745,074	-				+0.6
745,074	-				+3.5
745,079	+				+1.0
745,079	+				-1.3
745,080	-				+2.0
745,080	-				-2.2
745,080	-				-0.3
745,083	+				-0.4
745,083	+				-2.0
745,114	+				-1.6
745,114	+				-2.5
745,114	+				+0.2
745,114	+				-3.0
745,114	+				-0.2
745,114	+				+0.4
745,114	+				-0.6
745,115	-				-0.3
745,115	-				-0.4
745,115	-				+2.1
745,115	-				-0.3
745,115	-				+0.3
745,115	-				-0.3
745,115	-				-2.5
745,115	-				+0.1
745,115	-				+1.2
745,115	-				+0.4
745,115	-				-1.8
745,118	+				+1.7
745,118	+				+1.0
745,118	+				+0.3
745,118	+				-0.8
745,119	-				-2.4
745,119	-				+1.3
745,119	-				-0.3
745,131	+				+1.1
745,132	-				+0.7
745,132	-				-0.4
745,132	-				-2.6
745,133	+				-0.5
745,133	+				+1.6
745,134	-				+0.8
745,134	-				+0.4
745,134	-				-0.4
745,141	-				-0.8
745,148	+				+0.5
745,148	+				+1.5
745,148	+				-1.5
745,148	+				-1.2
745,148	+				-0.2
745,148	+				+0.1
745,148	+				-1.5
745,148	+				-0.1
745,149	-				-3.2
745,177	-				-2.0
745,177	-				+2.1
745,195	+				+1.0
745,195	+				+1.7
745,196	-				-1.2
745,196	-				+1.4
745,198	+				+0.4
745,198	+				-1.2
745,216	+				+1.3
745,217	-				-2.8
745,224	-				+0.6
745,247	-				-0.2
745,265	+				-1.2
745,265	+				-3.1
745,364	-		DZA65_RS03530	0.17	+1.4
745,374	+		DZA65_RS03530	0.18	-2.3
745,374	+		DZA65_RS03530	0.18	-2.5
745,375	-		DZA65_RS03530	0.19	+0.4
745,375	-		DZA65_RS03530	0.19	-1.0
745,375	-		DZA65_RS03530	0.19	-0.4
745,375	-		DZA65_RS03530	0.19	-0.2
745,375	-		DZA65_RS03530	0.19	+1.6
745,417	+		DZA65_RS03530	0.25	+1.5
745,417	+		DZA65_RS03530	0.25	-1.2
745,417	+		DZA65_RS03530	0.25	+0.8
745,418	-		DZA65_RS03530	0.25	+0.2
745,418	-		DZA65_RS03530	0.25	+1.8
745,418	-		DZA65_RS03530	0.25	+0.2
745,453	+		DZA65_RS03530	0.31	+1.8
745,453	+		DZA65_RS03530	0.31	-1.0
745,454	-		DZA65_RS03530	0.31	+0.1
745,454	-		DZA65_RS03530	0.31	-0.8
745,454	-		DZA65_RS03530	0.31	-1.0
745,454	-		DZA65_RS03530	0.31	+1.0
745,513	+		DZA65_RS03530	0.40	+0.8
745,513	+		DZA65_RS03530	0.40	-2.9
745,513	+		DZA65_RS03530	0.40	-0.2
745,513	+		DZA65_RS03530	0.40	-0.6
745,561	+		DZA65_RS03530	0.48	+1.4
745,561	+		DZA65_RS03530	0.48	-0.3
745,561	+		DZA65_RS03530	0.48	-0.2
745,561	+		DZA65_RS03530	0.48	-1.9
745,562	-		DZA65_RS03530	0.48	-0.8
745,562	-		DZA65_RS03530	0.48	+0.4
745,589	+		DZA65_RS03530	0.52	-0.6
745,589	+		DZA65_RS03530	0.52	+0.3
745,589	+		DZA65_RS03530	0.52	-0.8
745,589	+		DZA65_RS03530	0.52	+0.1
745,589	+		DZA65_RS03530	0.52	+0.4
745,590	-		DZA65_RS03530	0.52	+0.8
745,590	-		DZA65_RS03530	0.52	+0.5
745,604	+		DZA65_RS03530	0.55	-1.0
745,604	+		DZA65_RS03530	0.55	-1.3
745,605	-		DZA65_RS03530	0.55	-0.3
745,629	-		DZA65_RS03530	0.58	-2.0
745,629	-		DZA65_RS03530	0.58	+0.0
745,674	+		DZA65_RS03530	0.66	+1.8
745,675	-		DZA65_RS03530	0.66	-1.2
745,675	-		DZA65_RS03530	0.66	-0.2
745,675	-		DZA65_RS03530	0.66	-0.6
745,675	-		DZA65_RS03530	0.66	-2.2
745,675	-		DZA65_RS03530	0.66	-0.0
745,685	+		DZA65_RS03530	0.67	-0.5
745,685	+		DZA65_RS03530	0.67	+0.2
745,685	+		DZA65_RS03530	0.67	+0.8
745,685	+		DZA65_RS03530	0.67	+0.2
745,685	+		DZA65_RS03530	0.67	+0.5
745,686	-		DZA65_RS03530	0.67	-1.2
745,686	-		DZA65_RS03530	0.67	-2.3
745,686	-		DZA65_RS03530	0.67	-0.1
745,686	-		DZA65_RS03530	0.67	-0.4
745,734	+		DZA65_RS03530	0.75	+0.2
745,734	+		DZA65_RS03530	0.75	-0.9
745,734	+		DZA65_RS03530	0.75	+1.4
745,734	+		DZA65_RS03530	0.75	-0.8
745,735	-		DZA65_RS03530	0.75	+1.5
745,735	-		DZA65_RS03530	0.75	-0.3
745,735	-		DZA65_RS03530	0.75	-1.5
745,735	-		DZA65_RS03530	0.75	-0.8
745,735	-		DZA65_RS03530	0.75	-2.6
745,748	+		DZA65_RS03530	0.77	-2.3
745,749	-		DZA65_RS03530	0.77	-1.3
745,814	+		DZA65_RS03530	0.88	-0.8
745,815	-		DZA65_RS03530	0.88	-0.5
745,815	-		DZA65_RS03530	0.88	+0.3
745,845	+				+1.4
745,845	+				-0.7
745,845	+				-1.2
745,845	+				-0.2
745,845	+				+2.1
745,845	+				+0.4
745,845	+				+1.1
745,845	+				+0.5
745,845	+				-0.8
745,845	+				+1.2
745,845	+				+1.4
745,846	-				-0.4
745,846	-				-1.4
745,846	-				+0.8
745,846	-				-0.8
745,849	-				+1.0
745,880	+				-1.3
745,880	+				-0.2
745,886	+				+0.7
745,886	+				+0.1
745,890	+				+0.5
745,890	+				-0.9
745,890	+				-2.0
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745,890	+				-0.3
745,890	+				-0.0
745,890	+				-0.9
745,890	+				-1.5
745,891	-				-2.3
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745,891	-				+0.8
745,891	-				-1.2
745,891	-				+0.8
745,904	-				+0.7
745,904	-				+0.1
745,904	-				+0.7
745,950	+				+0.4
745,960	+				-1.0
745,960	+				+0.6
745,960	+				-1.3
745,961	-				+0.8
745,961	-				-0.4
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745,964	+				+1.3
745,964	+				+0.7
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745,964	+				+1.6
745,964	+				-0.4
745,964	+				-0.8
745,965	-				+0.7
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745,965	-				-0.7
745,965	-				-0.2
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745,969	+				+1.7
745,969	+				-0.2
745,969	+				-1.8
745,970	-				+0.4
746,003	-				-0.2
746,003	-				-0.8
746,009	+				+1.1
746,009	+				-1.2
746,010	-				-0.2
746,010	-				+0.1
746,010	-				-1.0
746,018	+				-1.5
746,018	+				-2.8
746,024	+				-0.8
746,027	+				+0.3
746,039	-				+0.5
746,039	-				+0.8
746,039	-				-0.1
746,039	-				-0.6
746,039	-				+0.6
746,039	-				+0.7
746,059	+				-0.8
746,060	-				-0.2