Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00340

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
81,721	+		DZA65_RS00330	0.85	-1.7
81,721	+		DZA65_RS00330	0.85	-0.5
81,721	+		DZA65_RS00330	0.85	+0.2
81,721	+		DZA65_RS00330	0.85	-0.5
81,721	+		DZA65_RS00330	0.85	-1.6
81,721	+		DZA65_RS00330	0.85	-1.2
81,722	-		DZA65_RS00330	0.85	+1.2
81,722	-		DZA65_RS00330	0.85	-0.5
81,722	-		DZA65_RS00330	0.85	+2.3
81,722	-		DZA65_RS00330	0.85	-0.5
81,722	-		DZA65_RS00330	0.85	-0.5
81,722	-		DZA65_RS00330	0.85	-2.9
81,731	+		DZA65_RS00330	0.85	-2.4
81,731	+		DZA65_RS00330	0.85	-1.3
81,731	+		DZA65_RS00330	0.85	-1.5
81,731	+		DZA65_RS00330	0.85	+1.0
81,731	+		DZA65_RS00330	0.85	-0.1
81,732	-		DZA65_RS00330	0.86	+1.4
81,732	-		DZA65_RS00330	0.86	-0.2
81,786	+				+1.8
81,786	+				-0.5
81,792	+				+1.1
81,793	-				-0.9
81,814	-				-0.9
81,846	+				+0.7
81,846	+				-0.7
81,846	+				+0.1
81,847	-				-3.0
81,894	+				+0.1
81,895	-				-2.6
81,900	-				+0.5
81,900	-				-0.4
81,947	+				-0.0
81,947	+				-1.3
81,948	-				+1.6
81,948	-				+0.4
81,948	-				-1.9
81,948	-				-1.2
81,970	-				+0.7
81,975	+				+1.4
81,976	-				-0.4
81,976	-				-0.9
81,976	-				+0.4
81,978	+				+0.8
81,978	+				+1.2
81,978	+				-0.5
81,978	+				+0.7
81,978	+				+0.8
81,978	+				+1.4
81,978	+				-1.6
81,978	+				-0.5
81,978	+				+2.2
81,978	+				+1.5
81,979	-				+1.5
81,979	-				-1.2
81,979	-				+1.1
81,979	-				+0.9
81,979	-				-0.3
81,979	-				-0.1
81,979	-				+1.1
81,979	-				-0.5
81,979	-				+0.1
81,979	-				-0.9
81,979	-				-1.9
81,979	-				-1.0
81,982	+				+1.6
81,982	+				+0.2
81,982	+				+1.5
81,982	+				+0.9
81,982	+				+0.1
81,982	+				-0.9
81,982	+				-0.5
81,982	+				-1.7
81,982	+				+1.1
81,982	+				-0.9
81,982	+				-0.9
81,982	+				-1.3
81,982	+				-0.5
81,982	+				+1.1
81,982	+				+0.6
81,982	+				+1.1
81,982	+				+2.3
81,982	+				-1.7
81,982	+				-2.4
81,982	+				+1.0
81,982	+				-1.5
81,982	+				-1.2
81,982	+				-0.2
81,982	+				-0.2
81,983	-				+0.5
81,983	-				-0.5
81,983	-				-1.1
81,983	-				+0.5
81,983	-				-1.9
81,983	-				+0.6
81,983	-				+1.3
81,983	-				+0.6
81,983	-				+1.1
81,983	-				+0.1
81,983	-				+1.4
81,983	-				-1.5
81,983	-				+0.3
81,983	-				-1.2
81,983	-				-0.3
81,983	-				-0.3
82,116	+		DZA65_RS00335	0.29	+1.8
82,116	+		DZA65_RS00335	0.29	+1.4
82,116	+		DZA65_RS00335	0.29	+0.8
82,116	+		DZA65_RS00335	0.29	-0.3
82,116	+		DZA65_RS00335	0.29	-1.2
82,116	+		DZA65_RS00335	0.29	-1.2
82,116	+		DZA65_RS00335	0.29	+0.2
82,116	+		DZA65_RS00335	0.29	-0.7
82,116	+		DZA65_RS00335	0.29	-1.5
82,116	+		DZA65_RS00335	0.29	-1.7
82,116	+		DZA65_RS00335	0.29	-3.2
82,116	+		DZA65_RS00335	0.29	-0.0
82,116	+		DZA65_RS00335	0.29	+0.5
82,117	-		DZA65_RS00335	0.29	+0.5
82,117	-		DZA65_RS00335	0.29	+0.0
82,117	-		DZA65_RS00335	0.29	-0.2
82,117	-		DZA65_RS00335	0.29	-0.3
82,117	-		DZA65_RS00335	0.29	+0.8
82,117	-		DZA65_RS00335	0.29	-1.5
82,117	-		DZA65_RS00335	0.29	-1.6
82,117	-		DZA65_RS00335	0.29	-0.9
82,117	-		DZA65_RS00335	0.29	+1.1
82,161	+		DZA65_RS00335	0.37	-0.3
82,161	+		DZA65_RS00335	0.37	-0.9
82,162	-		DZA65_RS00335	0.37	-0.7
82,162	-		DZA65_RS00335	0.37	+0.1
82,162	-		DZA65_RS00335	0.37	-0.8
82,162	-		DZA65_RS00335	0.37	-0.5
82,162	-		DZA65_RS00335	0.37	-0.9
82,258	+		DZA65_RS00335	0.53	-1.4
82,259	-		DZA65_RS00335	0.54	+0.1
82,345	+		DZA65_RS00335	0.69	+0.1
82,345	+		DZA65_RS00335	0.69	-1.4
82,345	+		DZA65_RS00335	0.69	-0.6
82,345	+		DZA65_RS00335	0.69	-0.3
82,345	+		DZA65_RS00335	0.69	-1.1
82,345	+		DZA65_RS00335	0.69	-0.1
82,345	+		DZA65_RS00335	0.69	+0.2
82,345	+		DZA65_RS00335	0.69	-0.1
82,345	+		DZA65_RS00335	0.69	-1.2
82,346	-		DZA65_RS00335	0.69	-1.7
82,346	-		DZA65_RS00335	0.69	-0.7
82,346	-		DZA65_RS00335	0.69	-1.2
82,346	-		DZA65_RS00335	0.69	+0.8
82,346	-		DZA65_RS00335	0.69	-0.5
82,346	-		DZA65_RS00335	0.69	+0.1
82,346	-		DZA65_RS00335	0.69	+2.3
82,346	-		DZA65_RS00335	0.69	-0.5
82,346	-		DZA65_RS00335	0.69	-0.1
82,381	+		DZA65_RS00335	0.75	-1.6
82,384	+		DZA65_RS00335	0.75	+0.8
82,384	+		DZA65_RS00335	0.75	+3.0
82,384	+		DZA65_RS00335	0.75	+1.3
82,384	+		DZA65_RS00335	0.75	+0.1
82,384	+		DZA65_RS00335	0.75	-0.9
82,385	-		DZA65_RS00335	0.76	-0.5
82,385	-		DZA65_RS00335	0.76	-1.4
82,389	+		DZA65_RS00335	0.76	-0.9
82,389	+		DZA65_RS00335	0.76	-1.5
82,390	-		DZA65_RS00335	0.76	+0.1
82,390	-		DZA65_RS00335	0.76	+2.1
82,390	-		DZA65_RS00335	0.76	+1.5
82,468	+				+0.9
82,468	+				+0.1
82,469	-				+0.5
82,469	-				+1.4
82,469	-				+0.5
82,528	+				-0.5
82,528	+				-0.2
82,528	+				+0.7
82,528	+				+0.5
82,528	+				-0.7
82,528	+				-0.9
82,528	+				-1.3
82,529	-				-0.7
82,529	-				-2.2
82,529	-				+1.7
82,529	-				+0.5
82,529	-				-0.7
82,529	-				-1.3
82,529	-				-1.0
82,574	+				-2.2
82,574	+				-0.4
82,613	-				-2.4
82,631	+				+0.1
82,661	+				-1.5
82,661	+				-1.5
82,662	-				-0.0
82,671	+				+0.7
82,671	+				+0.3
82,671	+				+0.6
82,671	+				-1.7
82,671	+				+0.8
82,671	+				-0.9
82,671	+				-1.2
82,671	+				-1.2
82,671	+				-2.2
82,672	-				-1.1
82,672	-				-2.4
82,672	-				+0.8
82,672	-				+1.4
82,672	-				-0.1
82,672	-				+1.1
82,672	-				+1.0
82,672	-				+0.3
82,672	-				+0.3
82,672	-				+0.9
82,672	-				-0.2
82,672	-				-2.1
82,672	-				+0.1
82,672	-				-0.6
82,672	-				-1.5
82,672	-				+1.5
82,673	+				+1.6
82,673	+				-0.1
82,673	+				-0.5
82,673	+				+0.6
82,673	+				-0.3
82,673	+				-2.2
82,673	+				+0.1
82,673	+				+1.1
82,673	+				+1.5
82,673	+				+0.3
82,673	+				-1.7
82,673	+				-1.4
82,673	+				+1.1
82,673	+				-1.1
82,673	+				-0.6
82,674	-				-0.2
82,674	-				+1.6
82,674	-				-0.3
82,674	-				+0.6
82,674	-				+0.2
82,674	-				+0.1
82,674	-				+0.6
82,674	-				-1.7
82,692	+				+1.3
82,692	+				-0.7
82,692	+				+0.6
82,693	-				-0.9
82,693	-				+0.9
82,693	-				+1.7
82,693	-				+0.3
82,693	-				-0.6
82,699	+				-0.6
82,699	+				+1.1
82,699	+				-0.0
82,699	+				-2.4
82,699	+				-0.0
82,700	-				-0.3
82,700	-				-0.6
82,706	+				+1.6
82,706	+				+0.2
82,706	+				-0.9
82,706	+				-0.3
82,706	+				-1.2
82,707	-				-1.4
82,707	-				+1.9
82,707	-				+2.7
82,707	-				-1.3
82,707	-				-1.7
82,720	+				+2.1
82,720	+				-0.2
82,720	+				-0.3
82,720	+				+0.5
82,721	-				-0.9
82,721	-				-2.3
82,721	-				-0.0
82,721	-				+0.5
82,721	-				+0.9
82,727	+				+0.5
82,727	+				+0.1
82,727	+				-0.2
82,727	+				-2.0
82,727	+				+1.1
82,727	+				-0.5
82,727	+				-1.1
82,727	+				+1.4
82,727	+				+0.2
82,727	+				-1.0
82,727	+				+0.4
82,728	-				-0.2
82,728	-				+0.1
82,728	-				+1.4
82,728	-				+0.9
82,728	-				+1.1
82,728	-				-0.1
82,728	-				-2.5
82,728	-				+0.4
82,729	+				-0.9
82,729	+				-1.2
82,729	+				+0.6
82,729	+				+1.0
82,729	+				+0.0
82,729	+				+0.1
82,729	+				-1.9
82,729	+				-0.6
82,729	+				-1.5
82,729	+				-0.9
82,729	+				-1.9
82,729	+				-0.6
82,729	+				+0.1
82,729	+				-0.1
82,730	-				+2.5
82,730	-				-0.6
82,730	-				-1.4
82,730	-				+2.5
82,730	-				+0.9
82,730	-				-2.4
82,730	-				+0.5
82,730	-				+0.1
82,730	-				-1.4
82,730	-				-1.1
82,730	-				+0.2
82,988	+				+0.0
83,034	+				+1.1
83,035	-				+0.3
83,039	+				+0.4
83,053	+				-0.2
83,053	+				+0.7
83,053	+				+0.3
83,054	-				+0.3
83,092	+				-1.2
83,092	+				+0.4
83,093	-				-2.1
83,093	-				+1.1
83,096	+				-0.0
83,096	+				+1.1
83,096	+				-0.4
83,096	+				+0.5
83,096	+				+0.1
83,097	-				-1.3
83,097	-				-0.2
83,097	-				-1.5
83,210	+		DZA65_RS00345	0.13	-1.2
83,210	+		DZA65_RS00345	0.13	+0.1
83,210	+		DZA65_RS00345	0.13	+0.4
83,210	+		DZA65_RS00345	0.13	+0.7
83,210	+		DZA65_RS00345	0.13	+1.8
83,211	-		DZA65_RS00345	0.13	-0.2
83,211	-		DZA65_RS00345	0.13	+2.1
83,211	-		DZA65_RS00345	0.13	-0.5
83,211	-		DZA65_RS00345	0.13	+0.3
83,211	-		DZA65_RS00345	0.13	-1.2
83,211	-		DZA65_RS00345	0.13	+0.4
83,211	-		DZA65_RS00345	0.13	-0.3
83,211	-		DZA65_RS00345	0.13	-0.5
83,226	-		DZA65_RS00345	0.14	+0.9
83,292	-		DZA65_RS00345	0.22	+2.1
83,328	+		DZA65_RS00345	0.26	-0.5
83,328	+		DZA65_RS00345	0.26	+3.9
83,328	+		DZA65_RS00345	0.26	-2.4
83,328	+		DZA65_RS00345	0.26	+1.3
83,328	+		DZA65_RS00345	0.26	-1.4
83,328	+		DZA65_RS00345	0.26	-0.3
83,328	+		DZA65_RS00345	0.26	+2.9
83,329	-		DZA65_RS00345	0.26	+0.1
83,329	-		DZA65_RS00345	0.26	+0.4
83,329	-		DZA65_RS00345	0.26	+1.2
83,329	-		DZA65_RS00345	0.26	+0.2
83,329	-		DZA65_RS00345	0.26	+0.1
83,329	-		DZA65_RS00345	0.26	-1.9
83,426	+		DZA65_RS00345	0.37	+1.3
83,427	-		DZA65_RS00345	0.37	+0.6
83,465	+		DZA65_RS00345	0.41	-1.2
83,465	+		DZA65_RS00345	0.41	-1.2
83,465	+		DZA65_RS00345	0.41	-0.8
83,466	-		DZA65_RS00345	0.41	+2.4
83,552	+		DZA65_RS00345	0.51	+0.9
83,552	+		DZA65_RS00345	0.51	+1.0
83,610	+		DZA65_RS00345	0.57	+0.5
83,610	+		DZA65_RS00345	0.57	-0.9
83,774	+		DZA65_RS00345	0.76	-0.6
83,774	+		DZA65_RS00345	0.76	+1.4
83,775	-		DZA65_RS00345	0.76	+0.8
83,775	-		DZA65_RS00345	0.76	+0.6
83,916	+				+0.5
83,916	+				-2.4
83,916	+				+1.4
83,916	+				+1.8
83,917	-				+1.6
83,942	-				-0.9
83,952	+				-0.0
83,952	+				+0.3
83,952	+				-0.1
83,952	+				-2.5
83,952	+				+0.1
83,952	+				+1.1
83,952	+				-3.4
83,952	+				-0.6
83,952	+				+1.3
83,952	+				+0.8
83,952	+				-0.2
83,952	+				-2.1
83,952	+				-1.5
83,952	+				+0.3
83,952	+				-1.0
83,952	+				-1.1
83,952	+				+0.2
83,952	+				-1.2
83,952	+				+0.4
83,952	+				-0.0
83,952	+				+2.5
83,952	+				+0.1
83,952	+				+1.1
83,952	+				-0.6
83,952	+				-1.7
83,952	+				+0.0
83,952	+				+0.2
83,952	+				+1.4
83,952	+				-2.1
83,952	+				+1.8
83,952	+				-0.1
83,953	-				+1.2
83,953	-				+1.0
83,953	-				-0.9
83,953	-				-1.7
83,953	-				+1.1
83,953	-				+2.3
83,953	-				-1.0
83,953	-				-1.2
83,953	-				-1.7
83,953	-				+0.1
83,953	-				+1.3
83,953	-				+0.9
83,953	-				+0.7
83,953	-				-1.9
83,953	-				+0.7
83,953	-				-1.5
83,953	-				-0.8
83,953	-				+0.8
83,953	-				+1.1
83,953	-				+0.1
83,953	-				-1.2
83,953	-				-1.0
83,953	-				-1.5
83,953	-				+1.1
83,953	-				+0.6
83,953	-				-0.9
83,953	-				-0.9
83,953	-				+2.1
83,953	-				+0.7
83,953	-				+0.7
83,953	-				-0.1
83,954	+				-2.1
83,954	+				-0.2
83,954	+				+0.1
83,954	+				-0.9
83,954	+				-0.5
83,954	+				+0.4
83,954	+				-3.1
83,954	+				-0.6
83,954	+				-0.1
83,954	+				+0.9
83,954	+				-0.3
83,954	+				+0.2
83,954	+				+0.6
83,954	+				+1.7
83,954	+				-1.7
83,954	+				-1.7
83,955	-				+0.5
83,955	-				+0.7
83,955	-				-1.7
83,955	-				+0.3
83,955	-				+0.4
83,955	-				-0.2
83,955	-				+0.1
83,955	-				-0.1
83,955	-				+0.6
83,955	-				+0.1
83,955	-				+0.4
83,955	-				-0.5
83,955	-				+0.3
83,955	-				+0.1
83,988	+				+0.1
83,988	+				-1.5