Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22455

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,856,083	+		DZA65_RS22445	0.41	+2.6
4,856,083	+		DZA65_RS22445	0.41	-0.4
4,856,083	+		DZA65_RS22445	0.41	-1.5
4,856,083	+		DZA65_RS22445	0.41	+0.1
4,856,083	+		DZA65_RS22445	0.41	+1.9
4,856,083	+		DZA65_RS22445	0.41	-0.3
4,856,084	-		DZA65_RS22445	0.41	-1.3
4,856,084	-		DZA65_RS22445	0.41	+0.3
4,856,084	-		DZA65_RS22445	0.41	-1.7
4,856,084	-		DZA65_RS22445	0.41	-2.1
4,856,084	-		DZA65_RS22445	0.41	-0.3
4,856,138	+		DZA65_RS22445	0.48	+1.8
4,856,138	+		DZA65_RS22445	0.48	-0.6
4,856,138	+		DZA65_RS22445	0.48	-0.9
4,856,139	-		DZA65_RS22445	0.48	-1.3
4,856,139	-		DZA65_RS22445	0.48	+2.1
4,856,139	-		DZA65_RS22445	0.48	+0.4
4,856,182	+		DZA65_RS22445	0.53	-0.5
4,856,205	+		DZA65_RS22445	0.56	+0.9
4,856,205	+		DZA65_RS22445	0.56	-0.3
4,856,205	+		DZA65_RS22445	0.56	-0.4
4,856,205	+		DZA65_RS22445	0.56	-0.4
4,856,206	-		DZA65_RS22445	0.56	+1.1
4,856,206	-		DZA65_RS22445	0.56	+0.4
4,856,236	-		DZA65_RS22445	0.60	-0.7
4,856,331	-		DZA65_RS22445	0.72	+2.6
4,856,361	+		DZA65_RS22445	0.76	-1.6
4,856,362	-		DZA65_RS22445	0.76	+1.1
4,856,404	+		DZA65_RS22445	0.82	+1.1
4,856,405	-		DZA65_RS22445	0.82	+0.5
4,856,405	-		DZA65_RS22445	0.82	+1.6
4,856,433	+		DZA65_RS22445	0.85	-1.0
4,856,434	-		DZA65_RS22445	0.85	+3.6
4,856,434	-		DZA65_RS22445	0.85	-0.4
4,856,454	+		DZA65_RS22445	0.88	-0.9
4,856,454	+		DZA65_RS22445	0.88	-0.1
4,856,454	+		DZA65_RS22445	0.88	-1.3
4,856,454	+		DZA65_RS22445	0.88	-1.3
4,856,454	+		DZA65_RS22445	0.88	-1.7
4,856,454	+		DZA65_RS22445	0.88	+2.3
4,856,455	-		DZA65_RS22445	0.88	+0.8
4,856,455	-		DZA65_RS22445	0.88	+1.7
4,856,455	-		DZA65_RS22445	0.88	+1.2
4,856,455	-		DZA65_RS22445	0.88	-0.5
4,856,455	-		DZA65_RS22445	0.88	-0.9
4,856,455	-		DZA65_RS22445	0.88	+1.4
4,856,472	+				-3.8
4,856,472	+				-1.3
4,856,472	+				-0.5
4,856,472	+				-3.5
4,856,472	+				+0.6
4,856,472	+				-2.1
4,856,472	+				-0.7
4,856,472	+				-1.4
4,856,473	-				+0.0
4,856,473	-				+0.1
4,856,473	-				-1.4
4,856,473	-				+0.4
4,856,473	-				-0.2
4,856,473	-				+0.1
4,856,473	-				-1.3
4,856,473	-				-0.3
4,856,473	-				-1.9
4,856,473	-				-0.7
4,856,475	-				+0.1
4,856,548	+				+2.1
4,856,549	-				+1.4
4,856,557	+				+0.5
4,856,557	+				-0.5
4,856,574	-				+1.8
4,856,574	-				+0.6
4,856,580	+				-0.5
4,856,581	-				-0.4
4,856,744	-		DZA65_RS22450	0.61	-1.1
4,856,744	-		DZA65_RS22450	0.61	-0.8
4,856,744	-		DZA65_RS22450	0.61	+0.6
4,856,820	+		DZA65_RS22450	0.90	+1.2
4,856,820	+		DZA65_RS22450	0.90	-0.7
4,856,820	+		DZA65_RS22450	0.90	-0.5
4,856,820	+		DZA65_RS22450	0.90	-1.7
4,856,820	+		DZA65_RS22450	0.90	-0.3
4,856,820	+		DZA65_RS22450	0.90	+0.4
4,856,820	+				+1.1
4,856,820	+		DZA65_RS22450	0.90	-0.3
4,856,820	+		DZA65_RS22450	0.90	+1.0
4,856,820	+		DZA65_RS22450	0.90	+0.5
4,856,820	+		DZA65_RS22450	0.90	-0.4
4,856,821	-				+0.7
4,856,821	-				+0.2
4,856,821	-				+1.3
4,856,821	-				-0.9
4,856,821	-				+1.6
4,856,821	-				+1.5
4,856,821	-				-1.4
4,856,821	-				+0.8
4,856,821	-				+1.3
4,856,821	-				-1.5
4,856,821	-				+1.7
4,856,963	+		DZA65_RS22455	0.36	-0.1
4,856,963	+		DZA65_RS22455	0.36	-1.5
4,856,963	+		DZA65_RS22455	0.36	-1.7
4,856,963	+		DZA65_RS22455	0.36	+2.1
4,856,964	-		DZA65_RS22455	0.37	-0.5
4,856,964	-		DZA65_RS22455	0.37	+0.4
4,856,964	-		DZA65_RS22455	0.37	-0.1
4,856,964	-		DZA65_RS22455	0.37	+3.1
4,856,964	-		DZA65_RS22455	0.37	-0.1
4,856,964	-		DZA65_RS22455	0.37	-0.3
4,856,964	-		DZA65_RS22455	0.37	-0.7
4,856,964	-		DZA65_RS22455	0.37	-0.2
4,856,964	-		DZA65_RS22455	0.37	+0.5
4,857,068	-		DZA65_RS22455	0.78	+0.2
4,857,122	+				+0.3
4,857,122	+				+0.5
4,857,122	+				+0.1
4,857,123	-				+0.7
4,857,123	-				+0.6
4,857,209	+		DZA65_RS22460	0.17	-1.7
4,857,209	+		DZA65_RS22460	0.17	-0.3
4,857,210	-		DZA65_RS22460	0.17	-0.4
4,857,210	-		DZA65_RS22460	0.17	-0.3
4,857,212	+		DZA65_RS22460	0.17	+0.6
4,857,212	+		DZA65_RS22460	0.17	+0.5
4,857,212	+		DZA65_RS22460	0.17	+0.6
4,857,212	+		DZA65_RS22460	0.17	-0.6
4,857,212	+		DZA65_RS22460	0.17	+0.2
4,857,213	-		DZA65_RS22460	0.17	-0.2
4,857,213	-		DZA65_RS22460	0.17	-0.1
4,857,213	-		DZA65_RS22460	0.17	+0.8
4,857,213	-		DZA65_RS22460	0.17	+0.3
4,857,213	-		DZA65_RS22460	0.17	+0.7
4,857,213	-		DZA65_RS22460	0.17	+0.8
4,857,213	-		DZA65_RS22460	0.17	-0.2
4,857,213	-		DZA65_RS22460	0.17	-1.4
4,857,213	-		DZA65_RS22460	0.17	+0.1
4,857,235	+		DZA65_RS22460	0.21	+0.7
4,857,236	-		DZA65_RS22460	0.21	+0.3
4,857,467	+		DZA65_RS22460	0.60	-0.5
4,857,467	+		DZA65_RS22460	0.60	-0.5
4,857,467	+		DZA65_RS22460	0.60	-0.3
4,857,468	-		DZA65_RS22460	0.60	+0.3
4,857,468	-		DZA65_RS22460	0.60	-0.8
4,857,513	+		DZA65_RS22460	0.68	+0.4
4,857,514	-		DZA65_RS22460	0.68	-0.5
4,857,569	-		DZA65_RS22460	0.77	+0.1
4,857,575	-		DZA65_RS22460	0.79	+0.3
4,857,633	+		DZA65_RS22460	0.88	+0.8
4,857,633	+		DZA65_RS22460	0.88	-1.6
4,857,634	-		DZA65_RS22460	0.88	+0.4
4,857,674	-				-0.3
4,857,674	-				-0.2
4,857,674	-				-0.5
4,857,723	+				-0.3
4,857,745	-				+0.2
4,857,745	-				-0.6
4,857,745	-				-0.5
4,857,745	-				+0.5
4,857,760	+				-0.7
4,857,760	+				+0.4
4,857,760	+				+0.7
4,857,760	+				+1.3
4,857,761	-				+0.4
4,857,761	-				-2.6
4,857,761	-				-1.0
4,857,776	+				-1.3
4,857,776	+				+0.6
4,857,776	+				-0.3
4,857,777	-				-0.0
4,857,777	-				-1.5
4,857,777	-				-0.6
4,857,777	-				+1.1
4,857,777	-				+0.1
4,857,792	+				-0.7
4,857,792	+				-1.1
4,857,801	+				+0.5
4,857,801	+				+1.3
4,857,801	+				+0.4
4,857,801	+				+0.1
4,857,801	+				+0.1
4,857,801	+				+0.3
4,857,802	-				-1.7
4,857,802	-				+0.6
4,857,802	-				-1.8
4,857,802	-				+0.1
4,857,818	+				-0.8
4,857,818	+				+1.1
4,857,818	+				-0.2
4,857,818	+				+1.1
4,857,819	-				-0.9
4,857,819	-				+0.6
4,857,819	-				-1.9
4,857,819	-				-0.7
4,857,819	-				+0.4
4,857,819	-				+0.5
4,857,819	-				-1.3
4,857,909	-				+0.5
4,857,909	-				-0.9
4,857,909	-				-0.2
4,857,927	+				-0.1
4,858,002	+		DZA65_RS22465	0.14	+0.8
4,858,002	+		DZA65_RS22465	0.14	-0.8
4,858,002	+		DZA65_RS22465	0.14	-0.9
4,858,002	+		DZA65_RS22465	0.14	-0.1
4,858,002	+		DZA65_RS22465	0.14	+1.2
4,858,002	+		DZA65_RS22465	0.14	-0.0
4,858,002	+		DZA65_RS22465	0.14	+1.3
4,858,002	+		DZA65_RS22465	0.14	+0.0
4,858,003	-		DZA65_RS22465	0.14	-0.3
4,858,003	-		DZA65_RS22465	0.14	+0.3
4,858,003	-		DZA65_RS22465	0.14	-1.4
4,858,003	-		DZA65_RS22465	0.14	+0.1
4,858,003	-		DZA65_RS22465	0.14	-1.3
4,858,003	-		DZA65_RS22465	0.14	+0.3
4,858,003	-		DZA65_RS22465	0.14	-1.4
4,858,003	-		DZA65_RS22465	0.14	+0.4
4,858,003	-		DZA65_RS22465	0.14	-1.0
4,858,003	-		DZA65_RS22465	0.14	-0.7
4,858,003	-		DZA65_RS22465	0.14	+1.5
4,858,003	-		DZA65_RS22465	0.14	+0.5
4,858,060	-		DZA65_RS22465	0.18	-1.2