Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22070

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,769,713	-		DZA65_RS22055	0.79	-1.5
4,769,724	+		DZA65_RS22055	0.80	-0.5
4,769,724	+		DZA65_RS22055	0.80	-1.8
4,769,724	+		DZA65_RS22055	0.80	+0.2
4,769,724	+		DZA65_RS22055	0.80	-1.3
4,769,724	+		DZA65_RS22055	0.80	-0.2
4,769,724	+		DZA65_RS22055	0.80	+1.1
4,769,725	-		DZA65_RS22055	0.81	+1.2
4,769,725	-		DZA65_RS22055	0.81	+0.4
4,769,725	-		DZA65_RS22055	0.81	-0.6
4,769,726	+		DZA65_RS22055	0.81	+0.1
4,769,726	+		DZA65_RS22055	0.81	+1.1
4,769,726	+		DZA65_RS22055	0.81	-1.5
4,769,726	+		DZA65_RS22055	0.81	-0.9
4,769,727	-		DZA65_RS22055	0.81	+0.1
4,769,760	+		DZA65_RS22055	0.84	+0.1
4,769,858	-				-0.6
4,769,894	+				-0.7
4,769,894	+				+0.5
4,769,895	-				-0.7
4,769,895	-				+0.4
4,769,895	-				+0.3
4,769,982	-				-1.9
4,770,003	+				+0.8
4,770,003	+				-0.3
4,770,003	+				-0.7
4,770,003	+				+2.3
4,770,003	+				-0.5
4,770,004	-				+0.1
4,770,004	-				-0.2
4,770,004	-				+0.5
4,770,004	-				+0.1
4,770,004	-				-2.6
4,770,004	-				+1.1
4,770,004	-				+0.4
4,770,004	-				-1.4
4,770,005	+				-0.0
4,770,005	+				-1.8
4,770,005	+				-1.9
4,770,005	+				+1.5
4,770,005	+				-0.4
4,770,005	+				-0.7
4,770,005	+				+0.2
4,770,005	+				-0.2
4,770,005	+				-2.4
4,770,005	+				+0.8
4,770,005	+				+3.4
4,770,006	-				-0.4
4,770,006	-				+0.9
4,770,006	-				-0.5
4,770,006	-				-1.6
4,770,006	-				+2.6
4,770,006	-				+0.5
4,770,006	-				-0.2
4,770,006	-				+1.1
4,770,006	-				-0.8
4,770,006	-				+1.5
4,770,006	-				-1.0
4,770,006	-				+0.2
4,770,054	+		DZA65_RS22060	0.44	+0.1
4,770,055	-		DZA65_RS22060	0.45	-0.2
4,770,055	-		DZA65_RS22060	0.45	-0.2
4,770,055	-		DZA65_RS22060	0.45	-2.1
4,770,069	+		DZA65_RS22060	0.56	-0.3
4,770,069	+		DZA65_RS22060	0.56	-0.5
4,770,084	+				-0.5
4,770,085	-				-1.1
4,770,085	-				+1.6
4,770,085	-				-0.1
4,770,085	-				-0.0
4,770,160	+		DZA65_RS22065	0.27	-0.2
4,770,160	+		DZA65_RS22065	0.27	+0.1
4,770,160	+		DZA65_RS22065	0.27	-0.9
4,770,160	+		DZA65_RS22065	0.27	+0.1
4,770,160	+		DZA65_RS22065	0.27	+0.2
4,770,160	+		DZA65_RS22065	0.27	+0.7
4,770,160	+		DZA65_RS22065	0.27	+0.8
4,770,160	+		DZA65_RS22065	0.27	-0.8
4,770,160	+		DZA65_RS22065	0.27	+1.1
4,770,160	+		DZA65_RS22065	0.27	-0.9
4,770,161	-		DZA65_RS22065	0.28	-0.1
4,770,161	-		DZA65_RS22065	0.28	-0.9
4,770,161	-		DZA65_RS22065	0.28	+0.7
4,770,161	-		DZA65_RS22065	0.28	-0.5
4,770,161	-		DZA65_RS22065	0.28	+0.3
4,770,161	-		DZA65_RS22065	0.28	-2.1
4,770,161	-		DZA65_RS22065	0.28	-0.8
4,770,161	-		DZA65_RS22065	0.28	+2.0
4,770,188	+		DZA65_RS22065	0.37	-1.7
4,770,188	+		DZA65_RS22065	0.37	+0.8
4,770,189	-		DZA65_RS22065	0.38	-0.5
4,770,189	-		DZA65_RS22065	0.38	+0.1
4,770,189	-		DZA65_RS22065	0.38	+0.5
4,770,189	-		DZA65_RS22065	0.38	+0.4
4,770,189	-		DZA65_RS22065	0.38	+1.5
4,770,189	-		DZA65_RS22065	0.38	+0.2
4,770,212	+		DZA65_RS22065	0.46	+0.6
4,770,212	+		DZA65_RS22065	0.46	-0.8
4,770,212	+		DZA65_RS22065	0.46	+0.1
4,770,212	+		DZA65_RS22065	0.46	-0.4
4,770,213	-		DZA65_RS22065	0.46	+1.7
4,770,213	-		DZA65_RS22065	0.46	+1.4
4,770,222	+		DZA65_RS22065	0.49	+0.1
4,770,222	+		DZA65_RS22065	0.49	+0.6
4,770,222	+		DZA65_RS22065	0.49	+0.7
4,770,223	-		DZA65_RS22065	0.50	+2.0
4,770,223	-		DZA65_RS22065	0.50	+0.9
4,770,223	-		DZA65_RS22065	0.50	+0.5
4,770,266	-		DZA65_RS22065	0.65	-1.5
4,770,315	-		DZA65_RS22065	0.82	-1.9
4,770,357	-				+0.7
4,770,357	-				+0.4
4,770,357	-				-0.7
4,770,424	-				-0.7
4,770,435	-				+0.5
4,770,435	-				-0.4
4,770,456	-				-0.5
4,770,468	+				-0.1
4,770,468	+				+0.3
4,770,487	+				-0.7
4,770,488	-				+0.5
4,770,494	-				+1.5
4,770,500	-				-1.4
4,770,523	+				-0.0
4,770,524	-				+0.5
4,770,524	-				+0.4
4,770,576	+				+1.1
4,770,576	+				+0.4
4,770,576	+				-0.3
4,770,577	-				+0.2
4,770,577	-				+0.1
4,770,618	+				-1.0
4,770,618	+				+0.1
4,770,618	+				+0.5
4,770,618	+				+0.1
4,770,618	+				+2.1
4,770,618	+				+1.2
4,770,618	+				-0.3
4,770,619	-				+1.1
4,770,619	-				-0.7
4,770,619	-				-0.2
4,770,619	-				-0.1
4,770,619	-				-2.1
4,770,619	-				-0.7
4,770,619	-				+1.7
4,770,619	-				+2.5
4,770,626	+				+1.3
4,770,626	+				+0.9
4,770,626	+				-0.3
4,770,626	+				+0.1
4,770,626	+				+0.2
4,770,626	+				-0.5
4,770,626	+				-1.3
4,770,626	+				-1.5
4,770,626	+				-2.1
4,770,627	-				+0.1
4,770,717	+				+1.1
4,770,717	+				-0.1
4,770,717	+				+0.1
4,770,717	+				+0.2
4,770,717	+				+1.9
4,770,717	+				-0.5
4,770,717	+				+1.1
4,770,717	+				-0.5
4,770,717	+				+0.4
4,770,717	+				+2.1
4,770,717	+				+0.1
4,770,717	+				+1.1
4,770,717	+				-0.7
4,770,718	-				-0.2
4,770,718	-				-0.9
4,770,718	-				-0.0
4,770,718	-				+0.7
4,770,718	-				+0.6
4,770,718	-				+1.5
4,770,718	-				+0.5
4,770,718	-				+0.2
4,770,718	-				-0.9
4,770,718	-				+3.0
4,770,718	-				-0.6
4,770,718	-				-0.3
4,770,718	-				-2.6
4,770,719	+				-0.4
4,770,719	+				-3.0
4,770,719	+				+0.3
4,770,719	+				-1.0
4,770,719	+				-2.6
4,770,719	+				-0.4
4,770,719	+				-0.3
4,770,719	+				-0.9
4,770,719	+				-0.2
4,770,719	+				+1.5
4,770,720	-				-0.4
4,770,720	-				+1.1
4,770,720	-				+0.3
4,770,720	-				+1.6
4,770,720	-				-1.8
4,770,720	-				-0.7
4,770,720	-				-0.5
4,770,720	-				-0.4
4,770,721	+				+1.2
4,770,721	+				-2.0
4,770,721	+				-0.0
4,770,721	+				+0.9
4,770,721	+				+0.1
4,770,721	+				-0.7
4,770,721	+				-0.7
4,770,721	+				-0.2
4,770,721	+				-3.1
4,770,721	+				+0.1
4,770,721	+				-0.1
4,770,721	+				+0.5
4,770,721	+				-1.3
4,770,721	+				+0.3
4,770,721	+				-1.3
4,770,721	+				-0.3
4,770,722	-				-0.6
4,770,722	-				+0.6
4,770,722	-				-0.7
4,770,722	-				+1.1
4,770,722	-				+0.1
4,770,722	-				-1.3
4,770,722	-				-0.1
4,770,830	+		DZA65_RS22070	0.18	-2.2
4,770,931	+		DZA65_RS22070	0.28	+1.1
4,770,932	-		DZA65_RS22070	0.28	-0.9
4,770,932	-		DZA65_RS22070	0.28	-0.5
4,771,072	+		DZA65_RS22070	0.42	-0.4
4,771,073	-		DZA65_RS22070	0.42	-0.8
4,771,227	+		DZA65_RS22070	0.57	-0.4
4,771,227	+		DZA65_RS22070	0.57	-0.9
4,771,228	-		DZA65_RS22070	0.58	+0.8
4,771,236	+		DZA65_RS22070	0.58	-0.2
4,771,237	-		DZA65_RS22070	0.58	+0.1
4,771,300	+		DZA65_RS22070	0.65	+1.2
4,771,300	+		DZA65_RS22070	0.65	+1.5
4,771,300	+		DZA65_RS22070	0.65	-0.9
4,771,300	+		DZA65_RS22070	0.65	+0.1
4,771,300	+		DZA65_RS22070	0.65	-1.0
4,771,300	+		DZA65_RS22070	0.65	-2.2
4,771,301	-		DZA65_RS22070	0.65	+0.1
4,771,301	-		DZA65_RS22070	0.65	+0.1
4,771,301	-		DZA65_RS22070	0.65	-0.3
4,771,301	-		DZA65_RS22070	0.65	-0.5
4,771,301	-		DZA65_RS22070	0.65	+1.9
4,771,301	-		DZA65_RS22070	0.65	+0.3
4,771,301	-		DZA65_RS22070	0.65	-0.1
4,771,301	-		DZA65_RS22070	0.65	-2.5
4,771,301	-		DZA65_RS22070	0.65	-0.9
4,771,301	-		DZA65_RS22070	0.65	-1.1
4,771,430	+		DZA65_RS22070	0.78	-0.9
4,771,431	-		DZA65_RS22070	0.78	-1.6
4,771,431	-		DZA65_RS22070	0.78	-1.9
4,771,431	-		DZA65_RS22070	0.78	-0.7
4,771,587	+				-1.9
4,771,587	+				+1.3
4,771,587	+				+1.1
4,771,587	+				-0.8
4,771,588	-				+1.8
4,771,588	-				-1.3
4,771,588	-				+0.1
4,771,588	-				+0.1
4,771,588	-				-0.9
4,771,588	-				-1.8
4,771,588	-				+0.2
4,771,591	+				-0.4
4,771,591	+				-0.5
4,771,591	+				+1.4
4,771,591	+				-1.4
4,771,591	+				+1.1
4,771,591	+				-1.3
4,771,591	+				-0.9
4,771,591	+				-1.2
4,771,592	-				+0.5
4,771,592	-				-0.1
4,771,592	-				-0.3
4,771,592	-				-1.7
4,771,592	-				-0.9
4,771,592	-				-1.7
4,771,592	-				-0.4
4,771,638	+				-1.1
4,771,638	+				+1.3
4,771,638	+				+0.5
4,771,638	+				-1.5
4,771,638	+				+1.1
4,771,639	-				+0.6
4,771,639	-				+0.3
4,771,639	-				+0.5
4,771,639	-				+1.1
4,771,639	-				+1.1
4,771,696	-				-1.5
4,771,696	-				-1.5
4,771,696	-				+1.1
4,771,703	+				-1.1
4,771,704	-				+0.8
4,771,801	+				+1.1
4,771,874	+				+2.6
4,771,876	+				+0.4
4,771,876	+				-1.3
4,771,876	+				-0.5
4,771,876	+				-2.4
4,771,876	+				-1.3
4,771,876	+				-1.2
4,771,876	+				-1.9
4,771,876	+				-0.7
4,771,876	+				-0.3
4,771,877	-				-0.6
4,771,877	-				-0.1
4,771,877	-				+0.1
4,771,877	-				-0.5
4,771,877	-				+0.4
4,771,877	-				+3.1
4,771,877	-				+2.3
4,771,877	-				-1.4
4,771,922	+				-0.3
4,772,032	+		DZA65_RS22075	0.16	-1.0
4,772,032	+		DZA65_RS22075	0.16	-0.0
4,772,032	+		DZA65_RS22075	0.16	-1.1
4,772,032	+		DZA65_RS22075	0.16	-2.2
4,772,033	-		DZA65_RS22075	0.16	-0.8
4,772,033	-		DZA65_RS22075	0.16	+2.1
4,772,033	-		DZA65_RS22075	0.16	+0.2
4,772,150	+		DZA65_RS22075	0.24	+0.1
4,772,151	-		DZA65_RS22075	0.25	-1.3
4,772,152	+		DZA65_RS22075	0.25	+1.7
4,772,152	+		DZA65_RS22075	0.25	-0.5
4,772,152	+		DZA65_RS22075	0.25	+0.1
4,772,152	+		DZA65_RS22075	0.25	+1.2
4,772,152	+		DZA65_RS22075	0.25	+1.7
4,772,152	+		DZA65_RS22075	0.25	-0.2
4,772,152	+		DZA65_RS22075	0.25	-0.3
4,772,152	+		DZA65_RS22075	0.25	-1.6
4,772,152	+		DZA65_RS22075	0.25	+0.8
4,772,152	+		DZA65_RS22075	0.25	+0.1
4,772,152	+		DZA65_RS22075	0.25	+0.1
4,772,152	+		DZA65_RS22075	0.25	+0.1
4,772,152	+		DZA65_RS22075	0.25	+0.2
4,772,153	-		DZA65_RS22075	0.25	+0.1
4,772,153	-		DZA65_RS22075	0.25	-1.1
4,772,153	-		DZA65_RS22075	0.25	-1.4
4,772,153	-		DZA65_RS22075	0.25	-0.2
4,772,153	-		DZA65_RS22075	0.25	+3.8
4,772,153	-		DZA65_RS22075	0.25	+0.9
4,772,153	-		DZA65_RS22075	0.25	+0.1
4,772,153	-		DZA65_RS22075	0.25	-0.9
4,772,153	-		DZA65_RS22075	0.25	-0.2
4,772,233	+		DZA65_RS22075	0.30	-1.3
4,772,233	+		DZA65_RS22075	0.30	-1.7
4,772,233	+		DZA65_RS22075	0.30	-0.3
4,772,234	-		DZA65_RS22075	0.30	+0.1
4,772,260	+		DZA65_RS22075	0.32	-1.4
4,772,260	+		DZA65_RS22075	0.32	+1.4
4,772,261	-		DZA65_RS22075	0.32	+1.3
4,772,261	-		DZA65_RS22075	0.32	-2.1
4,772,261	-		DZA65_RS22075	0.32	+0.7
4,772,333	+		DZA65_RS22075	0.37	-2.7
4,772,333	+		DZA65_RS22075	0.37	+2.4
4,772,333	+		DZA65_RS22075	0.37	+0.2
4,772,333	+		DZA65_RS22075	0.37	+0.7
4,772,333	+		DZA65_RS22075	0.37	-0.7
4,772,333	+		DZA65_RS22075	0.37	-1.1
4,772,333	+		DZA65_RS22075	0.37	-0.5
4,772,333	+		DZA65_RS22075	0.37	+0.1
4,772,333	+		DZA65_RS22075	0.37	+0.5
4,772,333	+		DZA65_RS22075	0.37	-0.1
4,772,334	-		DZA65_RS22075	0.37	+0.2
4,772,334	-		DZA65_RS22075	0.37	-0.4
4,772,334	-		DZA65_RS22075	0.37	-0.2
4,772,334	-		DZA65_RS22075	0.37	+0.6
4,772,334	-		DZA65_RS22075	0.37	-0.2
4,772,334	-		DZA65_RS22075	0.37	-1.5
4,772,334	-		DZA65_RS22075	0.37	+0.3
4,772,437	+		DZA65_RS22075	0.45	+1.7
4,772,438	-		DZA65_RS22075	0.45	-1.3
4,772,438	-		DZA65_RS22075	0.45	+2.3
4,772,438	-		DZA65_RS22075	0.45	-0.4
4,772,438	-		DZA65_RS22075	0.45	-0.5