Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21835

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,716,582	+		DZA65_RS21825	0.42	-0.5
4,716,582	+				+1.1
4,716,582	+		DZA65_RS21825	0.42	+1.1
4,716,582	+		DZA65_RS21825	0.42	-1.1
4,716,582	+		DZA65_RS21825	0.42	-1.3
4,716,582	+		DZA65_RS21825	0.42	+0.1
4,716,582	+		DZA65_RS21825	0.42	-1.1
4,716,582	+				-0.9
4,716,582	+		DZA65_RS21825	0.42	-2.4
4,716,582	+		DZA65_RS21825	0.42	-2.5
4,716,583	-		DZA65_RS21825	0.42	-2.1
4,716,583	-		DZA65_RS21825	0.42	-1.7
4,716,583	-		DZA65_RS21825	0.42	-1.9
4,716,583	-		DZA65_RS21825	0.42	-1.9
4,716,583	-		DZA65_RS21825	0.42	+0.7
4,716,583	-		DZA65_RS21825	0.42	-1.3
4,716,583	-		DZA65_RS21825	0.42	+0.1
4,716,583	-		DZA65_RS21825	0.42	+0.8
4,716,583	-		DZA65_RS21825	0.42	-1.9
4,716,583	-		DZA65_RS21825	0.42	-1.3
4,716,588	+		DZA65_RS21825	0.42	-0.7
4,716,589	-		DZA65_RS21825	0.43	-1.1
4,716,589	-		DZA65_RS21825	0.43	-0.9
4,716,589	-		DZA65_RS21825	0.43	+1.1
4,716,589	-		DZA65_RS21825	0.43	-2.5
4,716,589	-		DZA65_RS21825	0.43	-2.1
4,716,589	-		DZA65_RS21825	0.43	+0.1
4,716,589	-		DZA65_RS21825	0.43	-2.5
4,716,589	-		DZA65_RS21825	0.43	-1.7
4,716,589	-		DZA65_RS21825	0.43	-1.5
4,716,589	-		DZA65_RS21825	0.43	-1.3
4,716,589	-		DZA65_RS21825	0.43	-0.3
4,716,602	+		DZA65_RS21825	0.44	-0.7
4,716,602	+		DZA65_RS21825	0.44	-1.1
4,716,602	+		DZA65_RS21825	0.44	-1.5
4,716,626	+		DZA65_RS21825	0.47	-1.9
4,716,626	+		DZA65_RS21825	0.47	-0.5
4,716,627	-		DZA65_RS21825	0.47	-0.1
4,716,627	-		DZA65_RS21825	0.47	-0.5
4,716,627	-		DZA65_RS21825	0.47	-2.1
4,716,699	+		DZA65_RS21825	0.54	+0.2
4,716,744	+		DZA65_RS21825	0.59	-3.1
4,716,744	+		DZA65_RS21825	0.59	-1.7
4,716,745	-		DZA65_RS21825	0.59	-0.8
4,716,745	-		DZA65_RS21825	0.59	-1.3
4,716,745	-		DZA65_RS21825	0.59	-0.5
4,716,745	-		DZA65_RS21825	0.59	-0.9
4,716,752	+		DZA65_RS21825	0.60	+0.5
4,716,753	-		DZA65_RS21825	0.60	-0.9
4,716,753	-		DZA65_RS21825	0.60	-1.2
4,716,848	+		DZA65_RS21825	0.70	-2.2
4,716,941	+		DZA65_RS21825	0.80	-2.1
4,716,941	+		DZA65_RS21825	0.80	-2.9
4,716,941	+		DZA65_RS21825	0.80	+0.3
4,716,942	-		DZA65_RS21825	0.80	+0.3
4,716,942	-		DZA65_RS21825	0.80	+1.1
4,716,942	-		DZA65_RS21825	0.80	-0.8
4,716,942	-		DZA65_RS21825	0.80	-2.9
4,716,968	+				-0.5
4,717,002	+		DZA65_RS21825	0.87	-1.3
4,717,012	+		DZA65_RS21825	0.88	-1.4
4,717,132	+				+0.4
4,717,134	+				+0.8
4,717,134	+				-1.5
4,717,134	+				-0.5
4,717,167	-				-1.3
4,717,207	+				+1.3
4,717,208	-				+3.5
4,717,226	+				-2.3
4,717,226	+				-1.3
4,717,269	-				-0.4
4,717,269	-				+1.1
4,717,284	-				-1.4
4,717,355	+		DZA65_RS21830	0.34	+0.1
4,717,356	-		DZA65_RS21830	0.35	+0.7
4,717,356	-		DZA65_RS21830	0.35	+0.5
4,717,381	+		DZA65_RS21830	0.44	-0.5
4,717,382	-		DZA65_RS21830	0.45	-1.4
4,717,382	-		DZA65_RS21830	0.45	-0.2
4,717,442	+		DZA65_RS21830	0.67	-0.3
4,717,443	-		DZA65_RS21830	0.67	-1.5
4,717,447	+		DZA65_RS21830	0.69	+0.2
4,717,447	+		DZA65_RS21830	0.69	+1.6
4,717,448	-		DZA65_RS21830	0.69	+0.5
4,717,465	+		DZA65_RS21830	0.76	+0.2
4,717,465	+		DZA65_RS21830	0.76	+0.5
4,717,476	+		DZA65_RS21830	0.80	+0.3
4,717,476	+		DZA65_RS21830	0.80	-0.2
4,717,476	+		DZA65_RS21830	0.80	+0.1
4,717,476	+		DZA65_RS21830	0.80	+1.8
4,717,476	+		DZA65_RS21830	0.80	-0.5
4,717,476	+		DZA65_RS21830	0.80	-0.5
4,717,476	+		DZA65_RS21830	0.80	+0.3
4,717,477	-		DZA65_RS21830	0.80	-0.9
4,717,477	-		DZA65_RS21830	0.80	+0.8
4,717,477	-		DZA65_RS21830	0.80	+0.2
4,717,477	-		DZA65_RS21830	0.80	-0.6
4,717,477	-		DZA65_RS21830	0.80	+0.6
4,717,477	-		DZA65_RS21830	0.80	-1.3
4,717,511	+				-0.1
4,717,511	+				+0.3
4,717,514	+				-0.5
4,717,514	+				-0.1
4,717,514	+				+0.7
4,717,546	-				-1.1
4,717,557	-				+0.6
4,717,704	-		DZA65_RS21835	0.15	+0.4
4,717,726	-		DZA65_RS21835	0.17	-1.7
4,717,726	-		DZA65_RS21835	0.17	-1.3
4,717,726	-		DZA65_RS21835	0.17	-0.7
4,717,784	-		DZA65_RS21835	0.23	+0.3
4,718,046	+		DZA65_RS21835	0.48	-0.5
4,718,047	-		DZA65_RS21835	0.48	-1.5
4,718,047	-		DZA65_RS21835	0.48	-0.2
4,718,069	+		DZA65_RS21835	0.50	+0.1
4,718,070	-		DZA65_RS21835	0.50	-1.9
4,718,145	+		DZA65_RS21835	0.58	-0.1
4,718,160	-		DZA65_RS21835	0.59	+0.4
4,718,177	+		DZA65_RS21835	0.61	-1.2
4,718,191	+		DZA65_RS21835	0.62	-1.3
4,718,202	-		DZA65_RS21835	0.63	-1.1
4,718,226	+		DZA65_RS21835	0.66	-0.5
4,718,226	+		DZA65_RS21835	0.66	+0.2
4,718,226	+		DZA65_RS21835	0.66	+2.7
4,718,227	-		DZA65_RS21835	0.66	+1.4
4,718,242	+		DZA65_RS21835	0.67	-0.7
4,718,243	-		DZA65_RS21835	0.67	+0.7
4,718,243	-		DZA65_RS21835	0.67	-1.3
4,718,243	-		DZA65_RS21835	0.67	+0.7
4,718,243	-		DZA65_RS21835	0.67	+0.1
4,718,261	+		DZA65_RS21835	0.69	+0.5
4,718,274	+		DZA65_RS21835	0.70	+1.3
4,718,274	+		DZA65_RS21835	0.70	+0.6
4,718,274	+		DZA65_RS21835	0.70	-0.7
4,718,274	+		DZA65_RS21835	0.70	-1.1
4,718,274	+		DZA65_RS21835	0.70	+1.3
4,718,275	-		DZA65_RS21835	0.70	+1.7
4,718,275	-		DZA65_RS21835	0.70	-1.3
4,718,309	+		DZA65_RS21835	0.74	-0.6
4,718,310	-		DZA65_RS21835	0.74	+0.1
4,718,319	-		DZA65_RS21835	0.74	-0.7
4,718,319	-		DZA65_RS21835	0.74	-1.0
4,718,366	-		DZA65_RS21835	0.79	+0.3
4,718,411	+		DZA65_RS21835	0.83	+1.4
4,718,428	+		DZA65_RS21835	0.85	-2.3
4,718,563	+				+0.7
4,718,563	+				-0.3
4,718,563	+				+0.3
4,718,568	-				-1.5
4,718,580	+				-0.4
4,718,580	+				-0.5
4,718,581	-				-0.2
4,718,644	+				-1.1
4,718,644	+				+0.2
4,718,645	-				+1.1
4,718,645	-				+2.9
4,718,660	+		DZA65_RS21840	0.15	-0.3
4,718,660	+		DZA65_RS21840	0.15	-0.3
4,718,661	-		DZA65_RS21840	0.15	+0.0
4,718,690	-		DZA65_RS21840	0.39	-0.5
4,718,725	-		DZA65_RS21840	0.67	+0.7
4,718,725	-		DZA65_RS21840	0.67	+1.2
4,718,732	+		DZA65_RS21840	0.73	+1.2
4,718,732	+		DZA65_RS21840	0.73	+0.2
4,718,732	+		DZA65_RS21840	0.73	+0.1
4,718,732	+		DZA65_RS21840	0.73	-0.5
4,718,732	+		DZA65_RS21840	0.73	+1.5
4,718,732	+		DZA65_RS21840	0.73	-0.9
4,718,732	+		DZA65_RS21840	0.73	-0.9
4,718,733	-		DZA65_RS21840	0.73	+1.5
4,718,733	-		DZA65_RS21840	0.73	+0.4
4,718,733	-		DZA65_RS21840	0.73	-0.0
4,718,733	-		DZA65_RS21840	0.73	+1.1
4,718,733	-		DZA65_RS21840	0.73	+0.2
4,718,733	-		DZA65_RS21840	0.73	+0.2
4,718,738	+		DZA65_RS21840	0.77	-0.5
4,718,738	+		DZA65_RS21840	0.77	-0.3
4,718,738	+		DZA65_RS21840	0.77	-0.7
4,718,739	-		DZA65_RS21840	0.78	+0.5
4,718,739	-		DZA65_RS21840	0.78	-0.1
4,718,759	-				+0.1
4,718,781	-				+0.3
4,718,781	-				+0.8
4,718,793	+				+0.3
4,718,793	+				-0.9
4,718,793	+				-1.5
4,718,793	+				-0.3
4,718,794	-				+0.5
4,718,794	-				+0.1
4,718,794	-				+0.1
4,718,794	-				-0.4
4,718,794	-				-0.3
4,718,794	-				+0.7
4,718,794	-				-1.1
4,718,794	-				-0.6
4,718,794	-				+0.1
4,718,798	+				-0.7
4,718,798	+				+0.1
4,718,798	+				+1.5
4,718,798	+				-1.7
4,718,798	+				-0.5
4,718,798	+				+1.4
4,718,798	+				-0.5
4,718,798	+				-1.3
4,718,798	+				+1.1
4,718,798	+				-1.3
4,718,798	+				+0.7
4,718,798	+				-0.3
4,718,798	+				+2.1
4,718,798	+				+0.9
4,718,799	-				-0.7
4,718,799	-				-0.4
4,718,799	-				+0.3
4,718,799	-				-0.5
4,718,799	-				+0.4
4,718,799	-				-1.5
4,718,799	-				-0.8
4,718,799	-				-0.2
4,718,799	-				-1.7
4,718,802	+				-0.6
4,718,802	+				+0.2
4,718,802	+				-0.4
4,718,802	+				+0.2
4,718,802	+				-2.3
4,718,802	+				-1.3
4,718,802	+				+0.4
4,718,802	+				+1.1
4,718,802	+				-0.8
4,718,802	+				+1.0
4,718,802	+				+1.3
4,718,802	+				-1.4
4,718,802	+				+0.1
4,718,803	-				-0.7
4,718,803	-				-1.7
4,718,803	-				+0.2
4,718,803	-				-0.9
4,718,803	-				-0.7
4,718,803	-				+2.0
4,718,803	-				-0.5
4,718,803	-				+1.5
4,718,803	-				+0.1
4,718,803	-				+1.1
4,718,803	-				+0.1
4,718,803	-				-0.9
4,718,803	-				+2.9
4,718,830	+				+0.4
4,718,831	-				-0.3
4,718,831	-				-1.1
4,718,856	+				+0.1
4,718,856	+				-1.3
4,718,856	+				-0.1
4,718,856	+				+1.9
4,718,856	+				-1.1
4,718,856	+				+0.2
4,718,857	-				+0.1
4,718,857	-				+0.3
4,718,857	-				-0.0
4,718,857	-				+0.5
4,718,985	+		DZA65_RS21845	0.13	-0.4
4,718,985	+		DZA65_RS21845	0.13	-0.2
4,718,985	+		DZA65_RS21845	0.13	-2.2
4,718,985	+		DZA65_RS21845	0.13	+0.1
4,718,985	+		DZA65_RS21845	0.13	+1.5
4,718,985	+		DZA65_RS21845	0.13	-1.3
4,718,985	+		DZA65_RS21845	0.13	-0.2
4,718,985	+		DZA65_RS21845	0.13	+0.4
4,718,986	-		DZA65_RS21845	0.13	+0.1
4,718,986	-		DZA65_RS21845	0.13	+1.1
4,718,986	-		DZA65_RS21845	0.13	-0.3
4,718,986	-		DZA65_RS21845	0.13	-0.2
4,719,006	+		DZA65_RS21845	0.14	-1.7
4,719,007	-		DZA65_RS21845	0.14	-1.3
4,719,071	-		DZA65_RS21845	0.19	-0.9
4,719,090	+		DZA65_RS21845	0.20	-1.2
4,719,090	+		DZA65_RS21845	0.20	-1.3
4,719,090	+		DZA65_RS21845	0.20	-0.6
4,719,090	+		DZA65_RS21845	0.20	-1.4
4,719,090	+		DZA65_RS21845	0.20	-1.1
4,719,090	+		DZA65_RS21845	0.20	-1.3
4,719,090	+		DZA65_RS21845	0.20	+0.2
4,719,090	+		DZA65_RS21845	0.20	+1.8
4,719,091	-		DZA65_RS21845	0.20	+0.5
4,719,091	-		DZA65_RS21845	0.20	+3.7
4,719,091	-		DZA65_RS21845	0.20	+1.1
4,719,091	-		DZA65_RS21845	0.20	-0.1
4,719,267	+		DZA65_RS21845	0.32	-0.3
4,719,267	+		DZA65_RS21845	0.32	-0.6
4,719,267	+		DZA65_RS21845	0.32	+3.1
4,719,268	-		DZA65_RS21845	0.32	+0.3
4,719,334	+		DZA65_RS21845	0.37	+1.7
4,719,334	+		DZA65_RS21845	0.37	-0.5
4,719,334	+		DZA65_RS21845	0.37	-0.3
4,719,335	-		DZA65_RS21845	0.37	-1.3
4,719,368	-		DZA65_RS21845	0.39	-0.3
4,719,368	-		DZA65_RS21845	0.39	-0.2
4,719,376	-		DZA65_RS21845	0.39	-0.5