Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21350

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,618,187	+		DZA65_RS21340	0.35	-0.2
4,618,187	+		DZA65_RS21340	0.35	+2.5
4,618,220	+		DZA65_RS21340	0.38	-1.5
4,618,220	+		DZA65_RS21340	0.38	-1.9
4,618,221	-		DZA65_RS21340	0.38	+0.3
4,618,221	-		DZA65_RS21340	0.38	+0.2
4,618,221	-		DZA65_RS21340	0.38	-0.2
4,618,224	+		DZA65_RS21340	0.39	-1.5
4,618,224	+		DZA65_RS21340	0.39	+0.1
4,618,224	+		DZA65_RS21340	0.39	-1.9
4,618,224	+		DZA65_RS21340	0.39	+0.1
4,618,224	+		DZA65_RS21340	0.39	-0.3
4,618,224	+		DZA65_RS21340	0.39	-0.6
4,618,225	-		DZA65_RS21340	0.39	+0.5
4,618,225	-		DZA65_RS21340	0.39	+0.4
4,618,225	-		DZA65_RS21340	0.39	-1.0
4,618,225	-		DZA65_RS21340	0.39	-1.5
4,618,302	+		DZA65_RS21340	0.47	+0.1
4,618,302	+		DZA65_RS21340	0.47	-1.9
4,618,302	+		DZA65_RS21340	0.47	+0.4
4,618,302	+		DZA65_RS21340	0.47	+0.8
4,618,302	+		DZA65_RS21340	0.47	-0.6
4,618,303	-		DZA65_RS21340	0.47	+0.1
4,618,303	-		DZA65_RS21340	0.47	-0.3
4,618,303	-		DZA65_RS21340	0.47	+0.7
4,618,336	+		DZA65_RS21340	0.51	-0.7
4,618,336	+		DZA65_RS21340	0.51	-0.7
4,618,337	-		DZA65_RS21340	0.51	+0.9
4,618,407	+		DZA65_RS21340	0.58	+2.1
4,618,407	+		DZA65_RS21340	0.58	-0.6
4,618,407	+		DZA65_RS21340	0.58	-1.1
4,618,407	+		DZA65_RS21340	0.58	-0.0
4,618,407	+		DZA65_RS21340	0.58	-1.3
4,618,408	-				-0.5
4,618,450	-		DZA65_RS21340	0.63	-0.5
4,618,478	+		DZA65_RS21340	0.66	-0.2
4,618,478	+		DZA65_RS21340	0.66	-0.5
4,618,478	+		DZA65_RS21340	0.66	-0.3
4,618,478	+		DZA65_RS21340	0.66	-1.9
4,618,478	+		DZA65_RS21340	0.66	-0.9
4,618,478	+		DZA65_RS21340	0.66	-0.6
4,618,478	+		DZA65_RS21340	0.66	+0.9
4,618,478	+		DZA65_RS21340	0.66	-1.4
4,618,478	+		DZA65_RS21340	0.66	-1.3
4,618,478	+		DZA65_RS21340	0.66	-1.1
4,618,478	+		DZA65_RS21340	0.66	-0.4
4,618,478	+		DZA65_RS21340	0.66	-2.3
4,618,479	-		DZA65_RS21340	0.66	+0.6
4,618,479	-		DZA65_RS21340	0.66	-2.1
4,618,479	-		DZA65_RS21340	0.66	-0.5
4,618,479	-		DZA65_RS21340	0.66	-0.7
4,618,479	-		DZA65_RS21340	0.66	-1.5
4,618,479	-		DZA65_RS21340	0.66	+0.7
4,618,479	-		DZA65_RS21340	0.66	+0.5
4,618,479	-		DZA65_RS21340	0.66	+0.7
4,618,479	-		DZA65_RS21340	0.66	-0.4
4,618,479	-		DZA65_RS21340	0.66	-2.9
4,618,479	-		DZA65_RS21340	0.66	-1.6
4,618,479	-		DZA65_RS21340	0.66	-0.9
4,618,479	-		DZA65_RS21340	0.66	+1.0
4,618,479	-		DZA65_RS21340	0.66	+1.1
4,618,508	-		DZA65_RS21340	0.69	+0.1
4,618,508	-		DZA65_RS21340	0.69	-1.5
4,618,509	+		DZA65_RS21340	0.69	-0.6
4,618,509	+		DZA65_RS21340	0.69	+0.1
4,618,509	+		DZA65_RS21340	0.69	-0.5
4,618,509	+		DZA65_RS21340	0.69	-2.1
4,618,510	-		DZA65_RS21340	0.69	-0.9
4,618,510	-		DZA65_RS21340	0.69	+0.1
4,618,510	-		DZA65_RS21340	0.69	+0.0
4,618,510	-		DZA65_RS21340	0.69	-0.8
4,618,510	-		DZA65_RS21340	0.69	-0.3
4,618,510	-		DZA65_RS21340	0.69	+1.6
4,618,510	-		DZA65_RS21340	0.69	+0.9
4,618,510	-		DZA65_RS21340	0.69	+0.8
4,618,510	-		DZA65_RS21340	0.69	-0.3
4,618,510	-		DZA65_RS21340	0.69	+0.8
4,618,510	-		DZA65_RS21340	0.69	+0.3
4,618,510	-		DZA65_RS21340	0.69	-0.7
4,618,510	-		DZA65_RS21340	0.69	+0.5
4,618,510	-		DZA65_RS21340	0.69	+1.2
4,618,510	-		DZA65_RS21340	0.69	-1.3
4,618,575	+		DZA65_RS21340	0.76	-0.9
4,618,575	+		DZA65_RS21340	0.76	+0.2
4,618,575	+		DZA65_RS21340	0.76	-0.9
4,618,575	+		DZA65_RS21340	0.76	-0.3
4,618,575	+		DZA65_RS21340	0.76	-1.0
4,618,575	+		DZA65_RS21340	0.76	-0.5
4,618,575	+		DZA65_RS21340	0.76	+1.1
4,618,576	-		DZA65_RS21340	0.77	-1.5
4,618,576	-		DZA65_RS21340	0.77	-0.9
4,618,588	+		DZA65_RS21340	0.78	-0.9
4,618,588	+		DZA65_RS21340	0.78	-1.0
4,618,588	+		DZA65_RS21340	0.78	+1.1
4,618,588	+		DZA65_RS21340	0.78	+0.8
4,618,589	-		DZA65_RS21340	0.78	-2.3
4,618,589	-		DZA65_RS21340	0.78	+0.6
4,618,589	-		DZA65_RS21340	0.78	-0.3
4,618,589	-		DZA65_RS21340	0.78	-0.8
4,618,593	+		DZA65_RS21340	0.78	-0.8
4,618,593	+		DZA65_RS21340	0.78	-1.3
4,618,594	-		DZA65_RS21340	0.79	+1.5
4,618,594	-		DZA65_RS21340	0.79	+0.6
4,618,594	-		DZA65_RS21340	0.79	+1.4
4,618,666	+		DZA65_RS21340	0.86	-1.4
4,618,666	+		DZA65_RS21340	0.86	+1.8
4,618,666	+		DZA65_RS21340	0.86	-3.3
4,618,666	+		DZA65_RS21340	0.86	+0.3
4,618,666	+		DZA65_RS21340	0.86	-1.8
4,618,666	+		DZA65_RS21340	0.86	-3.1
4,618,666	+		DZA65_RS21340	0.86	+0.1
4,618,666	+		DZA65_RS21340	0.86	+1.1
4,618,666	+		DZA65_RS21340	0.86	+0.3
4,618,666	+		DZA65_RS21340	0.86	-2.2
4,618,666	+		DZA65_RS21340	0.86	-1.3
4,618,666	+		DZA65_RS21340	0.86	-0.3
4,618,666	+		DZA65_RS21340	0.86	-0.3
4,618,666	+		DZA65_RS21340	0.86	+0.1
4,618,666	+		DZA65_RS21340	0.86	-1.5
4,618,667	-		DZA65_RS21340	0.86	+0.3
4,618,667	-		DZA65_RS21340	0.86	-0.7
4,618,667	-		DZA65_RS21340	0.86	-0.5
4,618,667	-		DZA65_RS21340	0.86	+0.1
4,618,667	-		DZA65_RS21340	0.86	-0.1
4,618,667	-		DZA65_RS21340	0.86	+0.2
4,618,667	-		DZA65_RS21340	0.86	-1.5
4,618,667	-		DZA65_RS21340	0.86	-0.3
4,618,667	-		DZA65_RS21340	0.86	-0.9
4,618,669	-		DZA65_RS21340	0.87	-1.3
4,618,669	-		DZA65_RS21340	0.87	-1.2
4,618,669	-		DZA65_RS21340	0.87	-0.7
4,618,771	+				+0.7
4,618,771	+				+0.2
4,618,771	+				-0.9
4,618,771	+				+0.4
4,618,771	+				-0.2
4,618,771	+				-0.0
4,618,771	+				+1.2
4,618,771	+				+0.2
4,618,771	+				-0.4
4,618,771	+				-0.3
4,618,772	-				-1.6
4,618,772	-				+0.9
4,618,772	-				-2.5
4,618,772	-				-0.0
4,618,772	-				-0.5
4,618,772	-				+1.1
4,618,772	-				-0.3
4,618,773	+				+0.6
4,618,773	+				-1.1
4,618,773	+				-1.9
4,618,773	+				-0.1
4,618,773	+				-0.7
4,618,773	+				-2.6
4,618,774	-				-0.7
4,618,774	-				+0.1
4,618,774	-				+1.6
4,618,774	-				+0.8
4,618,774	-				+0.2
4,618,774	-				-0.5
4,618,774	-				-1.1
4,618,774	-				+0.5
4,618,774	-				-1.3
4,618,774	-				+0.0
4,618,774	-				-0.5
4,618,774	-				-2.5
4,618,774	-				-0.6
4,618,774	-				+1.4
4,618,774	-				+0.7
4,618,774	-				-0.4
4,618,774	-				+0.6
4,618,774	-				-1.9
4,618,774	-				-0.3
4,618,774	-				+1.1
4,618,774	-				-0.4
4,618,774	-				-0.5
4,618,774	-				-1.8
4,618,774	-				+0.2
4,618,774	-				+0.6
4,618,774	-				-1.4
4,618,826	+				+0.1
4,618,826	+				-1.3
4,618,826	+				-1.9
4,618,826	+				+0.8
4,618,826	+				-0.4
4,618,826	+				+0.8
4,618,826	+				-1.9
4,618,826	+				-1.3
4,618,826	+				-0.7
4,618,826	+				-0.9
4,618,826	+				-0.3
4,618,827	-				-0.5
4,618,827	-				+0.4
4,618,827	-				-0.9
4,618,827	-				-0.6
4,618,827	-				+0.1
4,618,827	-				-0.2
4,618,883	+		DZA65_RS21345	0.26	+1.7
4,618,883	+				+1.5
4,618,884	-				+0.1
4,618,884	-		DZA65_RS21345	0.26	+0.8
4,618,884	-		DZA65_RS21345	0.26	+0.3
4,618,884	-		DZA65_RS21345	0.26	-1.6
4,618,884	-		DZA65_RS21345	0.26	+1.6
4,618,898	+		DZA65_RS21345	0.31	-0.0
4,618,898	+		DZA65_RS21345	0.31	-1.2
4,618,899	-		DZA65_RS21345	0.32	-0.1
4,618,899	-		DZA65_RS21345	0.32	+2.6
4,618,899	-		DZA65_RS21345	0.32	-1.2
4,618,899	-		DZA65_RS21345	0.32	+0.8
4,618,899	-		DZA65_RS21345	0.32	+0.3
4,618,899	-		DZA65_RS21345	0.32	-0.1
4,618,899	-		DZA65_RS21345	0.32	+1.4
4,618,899	-		DZA65_RS21345	0.32	+1.6
4,618,930	+		DZA65_RS21345	0.44	+0.1
4,618,930	+		DZA65_RS21345	0.44	-0.5
4,618,930	+		DZA65_RS21345	0.44	-0.8
4,618,930	+		DZA65_RS21345	0.44	+0.6
4,618,930	+		DZA65_RS21345	0.44	+0.4
4,618,930	+		DZA65_RS21345	0.44	+0.2
4,618,930	+		DZA65_RS21345	0.44	-1.5
4,618,931	-		DZA65_RS21345	0.44	+0.8
4,618,940	+		DZA65_RS21345	0.48	+0.4
4,618,940	+		DZA65_RS21345	0.48	-0.4
4,618,955	-		DZA65_RS21345	0.53	-2.1
4,618,955	-		DZA65_RS21345	0.53	-0.2
4,619,080	+				-2.8
4,619,080	+				+0.3
4,619,080	+				+0.5
4,619,080	+				-0.6
4,619,080	+				-1.3
4,619,081	-				-0.4
4,619,081	-				+1.3
4,619,081	-				-2.1
4,619,081	-				-1.9
4,619,081	-				+2.1
4,619,081	-				-0.6
4,619,093	+				-0.9
4,619,094	-				+0.5
4,619,094	-				-1.5
4,619,094	-				-0.4
4,619,103	+				+0.1
4,619,104	-				-1.1
4,619,186	+				-0.3
4,619,186	+				-0.5
4,619,187	-				-0.5
4,619,187	-				+0.6
4,619,321	+		DZA65_RS21350	0.14	+0.8
4,619,321	+		DZA65_RS21350	0.14	+0.3
4,619,466	+		DZA65_RS21350	0.23	-1.3
4,619,467	-		DZA65_RS21350	0.23	-0.0
4,619,467	-		DZA65_RS21350	0.23	+0.1
4,619,473	+		DZA65_RS21350	0.23	+0.5
4,619,473	+		DZA65_RS21350	0.23	-2.3
4,619,474	-		DZA65_RS21350	0.23	-0.0
4,619,474	-		DZA65_RS21350	0.23	-1.1
4,619,474	-		DZA65_RS21350	0.23	-0.2
4,619,474	-		DZA65_RS21350	0.23	-0.5
4,619,474	-		DZA65_RS21350	0.23	-0.5
4,619,583	+		DZA65_RS21350	0.30	+1.1
4,619,583	+		DZA65_RS21350	0.30	-0.5
4,619,583	+		DZA65_RS21350	0.30	-0.6
4,619,583	+		DZA65_RS21350	0.30	-1.3
4,619,583	+		DZA65_RS21350	0.30	-1.2
4,619,583	+		DZA65_RS21350	0.30	-0.5
4,619,583	+		DZA65_RS21350	0.30	+0.1
4,619,583	+		DZA65_RS21350	0.30	-0.9
4,619,583	+		DZA65_RS21350	0.30	-1.5
4,619,583	+		DZA65_RS21350	0.30	+0.5
4,619,583	+		DZA65_RS21350	0.30	-0.4
4,619,583	+		DZA65_RS21350	0.30	+0.7
4,619,583	+		DZA65_RS21350	0.30	+0.2
4,619,584	-		DZA65_RS21350	0.30	+0.8
4,619,584	-		DZA65_RS21350	0.30	-0.3
4,619,584	-		DZA65_RS21350	0.30	+0.5
4,619,584	-		DZA65_RS21350	0.30	-2.1
4,619,584	-		DZA65_RS21350	0.30	-0.8
4,619,584	-		DZA65_RS21350	0.30	-0.1
4,619,584	-		DZA65_RS21350	0.30	+0.3
4,619,584	-		DZA65_RS21350	0.30	+0.5
4,619,584	-		DZA65_RS21350	0.30	-0.0
4,619,584	-		DZA65_RS21350	0.30	-1.1
4,619,584	-		DZA65_RS21350	0.30	+2.8
4,619,584	-		DZA65_RS21350	0.30	-0.5
4,619,647	-		DZA65_RS21350	0.34	-1.4
4,619,681	+		DZA65_RS21350	0.36	-0.8
4,619,682	-		DZA65_RS21350	0.36	-0.5
4,619,705	+		DZA65_RS21350	0.37	-0.3
4,619,706	-		DZA65_RS21350	0.37	+1.1
4,619,706	-		DZA65_RS21350	0.37	+1.2
4,619,706	-		DZA65_RS21350	0.37	+2.4
4,619,706	-		DZA65_RS21350	0.37	-0.5
4,619,717	+		DZA65_RS21350	0.38	+1.8
4,619,717	+		DZA65_RS21350	0.38	+1.6
4,619,815	+		DZA65_RS21350	0.44	-0.5
4,619,815	+		DZA65_RS21350	0.44	-1.8
4,619,815	+		DZA65_RS21350	0.44	-0.1
4,619,815	+		DZA65_RS21350	0.44	+0.1
4,619,815	+		DZA65_RS21350	0.44	-1.1
4,619,815	+		DZA65_RS21350	0.44	-1.8
4,619,815	+		DZA65_RS21350	0.44	-1.1
4,619,815	+		DZA65_RS21350	0.44	+0.2
4,619,815	+		DZA65_RS21350	0.44	-0.9
4,619,815	+		DZA65_RS21350	0.44	-0.7
4,619,815	+		DZA65_RS21350	0.44	-2.3
4,619,816	-		DZA65_RS21350	0.44	+1.1
4,619,816	-		DZA65_RS21350	0.44	-0.4
4,619,816	-		DZA65_RS21350	0.44	-0.5
4,619,816	-		DZA65_RS21350	0.44	+0.5
4,619,816	-		DZA65_RS21350	0.44	+0.1
4,619,816	-		DZA65_RS21350	0.44	-0.5
4,619,816	-		DZA65_RS21350	0.44	-1.1
4,619,816	-		DZA65_RS21350	0.44	-0.1
4,619,835	+		DZA65_RS21350	0.45	-1.3
4,619,835	+		DZA65_RS21350	0.45	-0.1
4,619,836	-		DZA65_RS21350	0.45	+0.5
4,619,836	-		DZA65_RS21350	0.45	-3.0
4,619,836	-		DZA65_RS21350	0.45	-1.8
4,619,959	+		DZA65_RS21350	0.53	-1.9
4,619,960	-		DZA65_RS21350	0.53	-1.5
4,619,960	-		DZA65_RS21350	0.53	+0.6
4,620,008	+		DZA65_RS21350	0.56	-0.8
4,620,008	+		DZA65_RS21350	0.56	+1.1
4,620,008	+		DZA65_RS21350	0.56	-0.2
4,620,009	-		DZA65_RS21350	0.56	-1.8
4,620,009	-				-0.9
4,620,009	-		DZA65_RS21350	0.56	-1.9
4,620,011	+		DZA65_RS21350	0.56	+0.1
4,620,011	+		DZA65_RS21350	0.56	+0.7
4,620,011	+		DZA65_RS21350	0.56	+2.3
4,620,134	+		DZA65_RS21350	0.63	-1.4
4,620,134	+		DZA65_RS21350	0.63	-0.5
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