Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21220

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,582,597	+		DZA65_RS21215	0.27	+0.7
4,582,597	+		DZA65_RS21215	0.27	-1.4
4,582,597	+		DZA65_RS21215	0.27	-0.6
4,582,597	+		DZA65_RS21215	0.27	+1.4
4,582,597	+		DZA65_RS21215	0.27	+0.3
4,582,597	+		DZA65_RS21215	0.27	-0.6
4,582,597	+		DZA65_RS21215	0.27	-0.4
4,582,598	-		DZA65_RS21215	0.27	-1.1
4,582,598	-		DZA65_RS21215	0.27	-1.1
4,582,598	-		DZA65_RS21215	0.27	+0.2
4,582,598	-		DZA65_RS21215	0.27	+0.3
4,582,598	-		DZA65_RS21215	0.27	+0.1
4,582,598	-		DZA65_RS21215	0.27	-0.9
4,582,621	+		DZA65_RS21215	0.29	+0.7
4,582,621	+		DZA65_RS21215	0.29	-1.9
4,582,621	+		DZA65_RS21215	0.29	-0.4
4,582,621	+		DZA65_RS21215	0.29	+0.5
4,582,621	+		DZA65_RS21215	0.29	+0.9
4,582,621	+		DZA65_RS21215	0.29	+0.3
4,582,621	+		DZA65_RS21215	0.29	-0.4
4,582,622	-		DZA65_RS21215	0.29	-0.5
4,582,622	-		DZA65_RS21215	0.29	+0.9
4,582,622	-		DZA65_RS21215	0.29	+0.8
4,582,622	-		DZA65_RS21215	0.29	+0.3
4,582,622	-		DZA65_RS21215	0.29	+0.6
4,582,622	-		DZA65_RS21215	0.29	-1.9
4,582,622	-		DZA65_RS21215	0.29	+1.1
4,582,622	-		DZA65_RS21215	0.29	-1.8
4,582,622	-		DZA65_RS21215	0.29	-2.4
4,582,622	-		DZA65_RS21215	0.29	-1.4
4,582,634	+		DZA65_RS21215	0.30	+1.6
4,582,635	-		DZA65_RS21215	0.30	+0.9
4,582,676	+		DZA65_RS21215	0.33	+0.9
4,582,677	-		DZA65_RS21215	0.33	-0.0
4,582,677	-		DZA65_RS21215	0.33	+0.1
4,582,684	+		DZA65_RS21215	0.34	+0.7
4,582,685	-		DZA65_RS21215	0.34	+3.1
4,582,716	+		DZA65_RS21215	0.36	-0.4
4,582,716	+		DZA65_RS21215	0.36	-0.4
4,582,717	-		DZA65_RS21215	0.36	+0.1
4,582,717	-		DZA65_RS21215	0.36	-0.4
4,582,717	-		DZA65_RS21215	0.36	+1.7
4,582,722	+		DZA65_RS21215	0.36	+0.6
4,582,722	+		DZA65_RS21215	0.36	-0.5
4,582,722	+		DZA65_RS21215	0.36	+0.3
4,582,722	+		DZA65_RS21215	0.36	+1.7
4,582,723	-		DZA65_RS21215	0.37	-0.1
4,582,723	-		DZA65_RS21215	0.37	+1.8
4,582,723	-		DZA65_RS21215	0.37	-1.9
4,582,743	+		DZA65_RS21215	0.38	+0.6
4,582,743	+		DZA65_RS21215	0.38	-0.2
4,582,743	+		DZA65_RS21215	0.38	-1.1
4,582,743	+		DZA65_RS21215	0.38	-0.2
4,582,744	-		DZA65_RS21215	0.38	-0.5
4,582,776	-		DZA65_RS21215	0.40	-0.2
4,582,789	+		DZA65_RS21215	0.41	-0.4
4,582,789	+		DZA65_RS21215	0.41	+0.7
4,582,789	+		DZA65_RS21215	0.41	-0.7
4,582,789	+		DZA65_RS21215	0.41	+1.5
4,582,789	+		DZA65_RS21215	0.41	+0.5
4,582,789	+		DZA65_RS21215	0.41	+0.9
4,582,791	+		DZA65_RS21215	0.42	-0.5
4,582,791	+		DZA65_RS21215	0.42	-0.8
4,582,791	+		DZA65_RS21215	0.42	+0.7
4,582,791	+		DZA65_RS21215	0.42	-0.8
4,582,792	-		DZA65_RS21215	0.42	+1.1
4,582,801	+		DZA65_RS21215	0.42	+0.6
4,582,801	+		DZA65_RS21215	0.42	+0.2
4,582,801	+		DZA65_RS21215	0.42	-0.5
4,582,801	+		DZA65_RS21215	0.42	-0.9
4,582,802	-		DZA65_RS21215	0.42	-0.5
4,582,802	-		DZA65_RS21215	0.42	-0.6
4,582,802	-		DZA65_RS21215	0.42	+1.1
4,582,802	-		DZA65_RS21215	0.42	+0.2
4,582,802	-		DZA65_RS21215	0.42	-0.8
4,582,802	-		DZA65_RS21215	0.42	-1.0
4,582,802	-		DZA65_RS21215	0.42	-0.4
4,582,802	-		DZA65_RS21215	0.42	-0.9
4,582,802	-		DZA65_RS21215	0.42	+1.1
4,582,802	-		DZA65_RS21215	0.42	-0.9
4,582,802	-		DZA65_RS21215	0.42	+1.1
4,582,802	-		DZA65_RS21215	0.42	+1.1
4,582,802	-		DZA65_RS21215	0.42	-0.2
4,582,821	+		DZA65_RS21215	0.44	-1.5
4,582,821	+		DZA65_RS21215	0.44	-0.0
4,582,821	+		DZA65_RS21215	0.44	-0.5
4,582,821	+		DZA65_RS21215	0.44	+1.6
4,582,822	-		DZA65_RS21215	0.44	-1.1
4,582,822	-		DZA65_RS21215	0.44	-0.9
4,582,822	-		DZA65_RS21215	0.44	+0.4
4,582,822	-		DZA65_RS21215	0.44	+2.3
4,582,822	-		DZA65_RS21215	0.44	+0.5
4,582,822	-		DZA65_RS21215	0.44	-0.5
4,582,822	-		DZA65_RS21215	0.44	-0.3
4,582,822	-		DZA65_RS21215	0.44	+1.0
4,582,834	+		DZA65_RS21215	0.45	+1.1
4,582,835	-		DZA65_RS21215	0.45	-2.3
4,582,928	+		DZA65_RS21215	0.52	-0.2
4,582,929	-		DZA65_RS21215	0.52	+0.1
4,582,958	+		DZA65_RS21215	0.54	-0.9
4,582,958	+		DZA65_RS21215	0.54	+0.2
4,582,958	+		DZA65_RS21215	0.54	-0.9
4,582,958	+				-0.5
4,582,958	+		DZA65_RS21215	0.54	+0.5
4,582,959	-		DZA65_RS21215	0.54	-0.4
4,582,959	-		DZA65_RS21215	0.54	+0.6
4,582,959	-		DZA65_RS21215	0.54	+1.4
4,582,987	+		DZA65_RS21215	0.56	-0.8
4,582,987	+		DZA65_RS21215	0.56	-1.7
4,582,987	+		DZA65_RS21215	0.56	-2.3
4,582,988	-		DZA65_RS21215	0.56	+0.3
4,582,988	-		DZA65_RS21215	0.56	-3.2
4,582,988	-		DZA65_RS21215	0.56	-1.9
4,582,988	-		DZA65_RS21215	0.56	+0.0
4,583,059	+		DZA65_RS21215	0.62	+0.1
4,583,059	+		DZA65_RS21215	0.62	-0.4
4,583,059	+		DZA65_RS21215	0.62	+0.7
4,583,059	+		DZA65_RS21215	0.62	+0.3
4,583,059	+		DZA65_RS21215	0.62	+0.3
4,583,059	+		DZA65_RS21215	0.62	+1.1
4,583,059	+		DZA65_RS21215	0.62	-1.5
4,583,059	+		DZA65_RS21215	0.62	+0.5
4,583,060	-		DZA65_RS21215	0.62	+2.1
4,583,060	-		DZA65_RS21215	0.62	+0.3
4,583,060	-		DZA65_RS21215	0.62	+1.1
4,583,060	-		DZA65_RS21215	0.62	+0.5
4,583,089	+		DZA65_RS21215	0.64	+0.3
4,583,089	+		DZA65_RS21215	0.64	-2.6
4,583,089	+		DZA65_RS21215	0.64	-0.8
4,583,090	-				-0.9
4,583,144	-		DZA65_RS21215	0.68	-0.6
4,583,144	-		DZA65_RS21215	0.68	+0.1
4,583,306	+		DZA65_RS21215	0.80	-0.1
4,583,307	-		DZA65_RS21215	0.80	-0.0
4,583,307	-		DZA65_RS21215	0.80	+1.1
4,583,307	-		DZA65_RS21215	0.80	-0.5
4,583,307	-		DZA65_RS21215	0.80	-0.1
4,583,308	+		DZA65_RS21215	0.80	+0.6
4,583,309	-		DZA65_RS21215	0.80	+0.1
4,583,309	-		DZA65_RS21215	0.80	+0.6
4,583,309	-		DZA65_RS21215	0.80	-0.4
4,583,317	+		DZA65_RS21215	0.81	+0.5
4,583,317	+		DZA65_RS21215	0.81	+1.4
4,583,317	+		DZA65_RS21215	0.81	+0.5
4,583,317	+		DZA65_RS21215	0.81	-0.5
4,583,318	-		DZA65_RS21215	0.81	-1.5
4,583,318	-		DZA65_RS21215	0.81	+0.5
4,583,318	-		DZA65_RS21215	0.81	-2.4
4,583,320	+		DZA65_RS21215	0.81	-0.3
4,583,320	+		DZA65_RS21215	0.81	-0.4
4,583,320	+		DZA65_RS21215	0.81	-0.4
4,583,320	+		DZA65_RS21215	0.81	+0.8
4,583,320	+		DZA65_RS21215	0.81	-1.1
4,583,320	+		DZA65_RS21215	0.81	-0.2
4,583,320	+		DZA65_RS21215	0.81	-2.3
4,583,320	+		DZA65_RS21215	0.81	-1.4
4,583,320	+		DZA65_RS21215	0.81	+0.2
4,583,320	+		DZA65_RS21215	0.81	-1.4
4,583,320	+		DZA65_RS21215	0.81	-0.3
4,583,320	+		DZA65_RS21215	0.81	-1.9
4,583,321	-		DZA65_RS21215	0.81	+0.1
4,583,321	-		DZA65_RS21215	0.81	-0.5
4,583,321	-		DZA65_RS21215	0.81	+0.5
4,583,321	-		DZA65_RS21215	0.81	+0.2
4,583,321	-		DZA65_RS21215	0.81	-0.1
4,583,321	-		DZA65_RS21215	0.81	-0.4
4,583,321	-		DZA65_RS21215	0.81	-0.4
4,583,321	-		DZA65_RS21215	0.81	-0.3
4,583,321	-		DZA65_RS21215	0.81	-1.8
4,583,321	-		DZA65_RS21215	0.81	-1.4
4,583,321	-		DZA65_RS21215	0.81	+1.1
4,583,324	+		DZA65_RS21215	0.81	+0.1
4,583,324	+		DZA65_RS21215	0.81	+1.4
4,583,324	+		DZA65_RS21215	0.81	+1.1
4,583,325	-		DZA65_RS21215	0.81	-0.2
4,583,325	-		DZA65_RS21215	0.81	+0.2
4,583,329	+		DZA65_RS21215	0.82	-0.9
4,583,329	+		DZA65_RS21215	0.82	+1.1
4,583,329	+		DZA65_RS21215	0.82	+0.1
4,583,329	+		DZA65_RS21215	0.82	-0.9
4,583,330	-		DZA65_RS21215	0.82	+0.5
4,583,330	-				+3.1
4,583,330	-		DZA65_RS21215	0.82	+3.3
4,583,330	-		DZA65_RS21215	0.82	+1.1
4,583,432	-		DZA65_RS21215	0.89	+0.1
4,583,446	+				-1.9
4,583,446	+				-1.8
4,583,446	+				-0.5
4,583,446	+				+0.8
4,583,446	+				-3.2
4,583,446	+				+2.3
4,583,447	-				-0.1
4,583,447	-				+1.6
4,583,447	-				+0.2
4,583,447	-				-0.3
4,583,447	-				-1.3
4,583,447	-				-1.1
4,583,775	+		DZA65_RS21220	0.19	-1.8
4,583,776	-		DZA65_RS21220	0.19	+1.1
4,583,814	+		DZA65_RS21220	0.23	+0.3
4,583,814	+		DZA65_RS21220	0.23	-0.6
4,583,814	+		DZA65_RS21220	0.23	+0.4
4,583,814	+		DZA65_RS21220	0.23	-0.3
4,583,815	-		DZA65_RS21220	0.23	+1.3
4,583,815	-		DZA65_RS21220	0.23	+0.7
4,583,815	-		DZA65_RS21220	0.23	+0.6
4,583,815	-		DZA65_RS21220	0.23	-1.3
4,583,815	-		DZA65_RS21220	0.23	+0.5
4,583,815	-		DZA65_RS21220	0.23	-1.8
4,583,846	+		DZA65_RS21220	0.26	-1.1
4,583,879	+		DZA65_RS21220	0.29	+2.8
4,583,879	+		DZA65_RS21220	0.29	-0.9
4,583,879	+		DZA65_RS21220	0.29	+0.2
4,583,880	-		DZA65_RS21220	0.29	-0.8
4,583,953	+		DZA65_RS21220	0.36	+1.3
4,583,953	+		DZA65_RS21220	0.36	+0.5
4,583,953	+		DZA65_RS21220	0.36	+1.4
4,583,966	+		DZA65_RS21220	0.37	+0.8
4,583,966	+		DZA65_RS21220	0.37	+0.2
4,583,966	+		DZA65_RS21220	0.37	+1.3
4,583,966	+		DZA65_RS21220	0.37	-1.9
4,583,966	+		DZA65_RS21220	0.37	+0.1
4,583,966	+		DZA65_RS21220	0.37	+0.8
4,583,966	+				+0.6
4,583,966	+		DZA65_RS21220	0.37	-0.0
4,583,966	+		DZA65_RS21220	0.37	-1.6
4,583,966	+		DZA65_RS21220	0.37	-0.5
4,583,966	+		DZA65_RS21220	0.37	+0.3
4,583,966	+		DZA65_RS21220	0.37	-0.8
4,583,967	-		DZA65_RS21220	0.37	-0.5
4,583,967	-		DZA65_RS21220	0.37	+0.9
4,583,967	-		DZA65_RS21220	0.37	+0.9
4,583,967	-		DZA65_RS21220	0.37	+1.3
4,583,967	-		DZA65_RS21220	0.37	+1.4
4,583,967	-		DZA65_RS21220	0.37	+0.7
4,583,967	-		DZA65_RS21220	0.37	-1.3
4,583,967	-		DZA65_RS21220	0.37	+0.3
4,583,967	-		DZA65_RS21220	0.37	+0.2
4,583,967	-		DZA65_RS21220	0.37	-0.1
4,584,161	+		DZA65_RS21220	0.55	+0.1
4,584,161	+		DZA65_RS21220	0.55	+1.1
4,584,161	+		DZA65_RS21220	0.55	-0.2
4,584,162	-		DZA65_RS21220	0.55	+1.2
4,584,162	-		DZA65_RS21220	0.55	-0.4
4,584,162	-		DZA65_RS21220	0.55	+0.6
4,584,162	-		DZA65_RS21220	0.55	+0.2
4,584,203	+		DZA65_RS21220	0.59	+0.2
4,584,203	+		DZA65_RS21220	0.59	+0.8
4,584,203	+		DZA65_RS21220	0.59	-0.0
4,584,203	+		DZA65_RS21220	0.59	-0.9
4,584,203	+		DZA65_RS21220	0.59	+0.7
4,584,305	+		DZA65_RS21220	0.68	+1.4
4,584,306	-		DZA65_RS21220	0.68	+0.4
4,584,306	-		DZA65_RS21220	0.68	+0.5
4,584,306	-		DZA65_RS21220	0.68	-2.6
4,584,332	+		DZA65_RS21220	0.71	+0.1
4,584,333	-		DZA65_RS21220	0.71	-0.9
4,584,481	+		DZA65_RS21220	0.84	+1.5
4,584,481	+		DZA65_RS21220	0.84	-1.5
4,584,482	-		DZA65_RS21220	0.84	+1.1
4,584,529	+		DZA65_RS21220	0.89	-0.9
4,584,576	+				-1.8
4,584,618	+				-1.2
4,584,639	+				+0.9
4,584,639	+				+0.1
4,584,639	+				-0.5
4,584,639	+				-1.3
4,584,639	+				-0.4
4,584,639	+				-0.9
4,584,639	+				+0.1
4,584,639	+				+0.5
4,584,639	+				-0.4
4,584,639	+				+1.5
4,584,639	+				+0.2
4,584,639	+				+0.8
4,584,639	+				+0.7
4,584,639	+				-1.1
4,584,639	+				+1.1
4,584,639	+				+0.1
4,584,639	+				-1.5
4,584,639	+				+0.8
4,584,639	+				-1.9
4,584,639	+				-0.5
4,584,639	+				+0.8
4,584,639	+				-0.3
4,584,639	+				+0.8
4,584,639	+				-0.4
4,584,639	+				-0.5
4,584,639	+				+0.1
4,584,639	+				-0.5
4,584,639	+				-0.6
4,584,639	+				+2.1
4,584,639	+				-1.3
4,584,639	+				-0.6
4,584,639	+				-0.5
4,584,639	+				+0.9
4,584,639	+				+1.1
4,584,639	+				+0.4
4,584,639	+				-1.5
4,584,640	-				-0.2
4,584,640	-				-0.5
4,584,640	-				+0.1
4,584,640	-				+1.6
4,584,640	-				-0.1
4,584,640	-				-1.8
4,584,640	-				-0.3
4,584,640	-				+1.8
4,584,640	-				+0.4
4,584,640	-				-0.7
4,584,640	-				-0.4
4,584,640	-				-0.2
4,584,640	-				+0.7
4,584,640	-				+0.1
4,584,640	-				+1.2
4,584,640	-				+0.6
4,584,640	-				-0.2
4,584,640	-				-1.5
4,584,640	-				-0.4
4,584,640	-				-1.8
4,584,640	-				-0.3
4,584,640	-				-1.2
4,584,640	-				+0.3
4,584,665	-				+0.2
4,584,698	-				+0.7
4,584,706	+				+0.1
4,584,706	+				-0.3
4,584,706	+				+0.3
4,584,706	+				+1.8
4,584,707	-				-1.2
4,584,707	-				+1.2
4,584,707	-				-0.9
4,584,707	-				-2.4
4,584,707	-				-0.7
4,584,707	-				+0.1
4,584,707	-				+0.0
4,584,707	-				+2.1
4,584,707	-				+2.0
4,584,707	-				+0.4
4,584,707	-				+0.6
4,584,707	-				-1.0
4,584,718	+				-0.9
4,584,719	-				-1.1
4,584,719	-				+2.6
4,584,812	-		DZA65_RS21225	0.13	+0.5
4,584,812	-		DZA65_RS21225	0.13	+0.7
4,584,812	-		DZA65_RS21225	0.13	+0.5
4,584,812	-		DZA65_RS21225	0.13	-0.5
4,584,873	+		DZA65_RS21225	0.18	-0.1
4,584,873	+		DZA65_RS21225	0.18	-0.5
4,584,873	+		DZA65_RS21225	0.18	-0.2
4,585,044	-		DZA65_RS21225	0.32	-0.5
4,585,075	+		DZA65_RS21225	0.34	+0.1
4,585,076	-		DZA65_RS21225	0.34	+0.1
4,585,076	-		DZA65_RS21225	0.34	+2.2
4,585,162	+		DZA65_RS21225	0.41	+1.1
4,585,162	+		DZA65_RS21225	0.41	-0.1
4,585,162	+		DZA65_RS21225	0.41	-0.5
4,585,163	-		DZA65_RS21225	0.41	-0.3
4,585,163	-		DZA65_RS21225	0.41	+0.4
4,585,163	-		DZA65_RS21225	0.41	+0.6
4,585,163	-		DZA65_RS21225	0.41	+0.5
4,585,163	-		DZA65_RS21225	0.41	+0.1
4,585,163	-		DZA65_RS21225	0.41	-1.5
4,585,163	-		DZA65_RS21225	0.41	-0.5
4,585,196	-		DZA65_RS21225	0.44	+0.9
4,585,249	-		DZA65_RS21225	0.48	+1.5
4,585,300	-		DZA65_RS21225	0.52	+1.9
4,585,300	-		DZA65_RS21225	0.52	+0.9
4,585,369	-		DZA65_RS21225	0.58	-1.0
4,585,369	-		DZA65_RS21225	0.58	+0.0
4,585,384	+		DZA65_RS21225	0.59	-0.2
4,585,384	+		DZA65_RS21225	0.59	+0.3
4,585,384	+		DZA65_RS21225	0.59	-0.3
4,585,385	-		DZA65_RS21225	0.59	+0.1
4,585,385	-		DZA65_RS21225	0.59	+0.2
4,585,385	-		DZA65_RS21225	0.59	-0.9
4,585,556	-		DZA65_RS21225	0.73	-1.3