Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20710

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,468,510	+		DZA65_RS20705	0.61	-0.2
4,468,510	+		DZA65_RS20705	0.61	-0.0
4,468,510	+		DZA65_RS20705	0.61	-1.1
4,468,510	+		DZA65_RS20705	0.61	-0.8
4,468,510	+		DZA65_RS20705	0.61	-0.3
4,468,510	+				+0.6
4,468,510	+		DZA65_RS20705	0.61	-1.0
4,468,511	-		DZA65_RS20705	0.61	-0.0
4,468,511	-		DZA65_RS20705	0.61	+2.8
4,468,511	-		DZA65_RS20705	0.61	-2.3
4,468,511	-		DZA65_RS20705	0.61	+0.6
4,468,511	-		DZA65_RS20705	0.61	+0.1
4,468,525	+		DZA65_RS20705	0.62	-0.0
4,468,525	+		DZA65_RS20705	0.62	-1.0
4,468,571	+		DZA65_RS20705	0.66	-0.7
4,468,572	-		DZA65_RS20705	0.66	-0.0
4,468,572	-		DZA65_RS20705	0.66	+0.1
4,468,572	-		DZA65_RS20705	0.66	+0.4
4,468,572	-		DZA65_RS20705	0.66	+0.3
4,468,579	+		DZA65_RS20705	0.67	-1.0
4,468,579	+		DZA65_RS20705	0.67	-0.0
4,468,579	+		DZA65_RS20705	0.67	+0.5
4,468,580	-		DZA65_RS20705	0.67	-0.9
4,468,580	-		DZA65_RS20705	0.67	+0.1
4,468,580	-		DZA65_RS20705	0.67	+0.7
4,468,580	-		DZA65_RS20705	0.67	+0.2
4,468,580	-		DZA65_RS20705	0.67	+0.9
4,468,580	-		DZA65_RS20705	0.67	+0.6
4,468,591	+		DZA65_RS20705	0.68	-0.7
4,468,591	+		DZA65_RS20705	0.68	-1.0
4,468,592	-		DZA65_RS20705	0.68	+1.3
4,468,592	-		DZA65_RS20705	0.68	-0.3
4,468,592	-		DZA65_RS20705	0.68	+0.5
4,468,592	-		DZA65_RS20705	0.68	+1.4
4,468,761	+		DZA65_RS20705	0.83	+0.4
4,468,761	+		DZA65_RS20705	0.83	+0.1
4,468,761	+		DZA65_RS20705	0.83	-0.2
4,468,765	+		DZA65_RS20705	0.83	-0.0
4,468,765	+		DZA65_RS20705	0.83	-2.2
4,468,765	+		DZA65_RS20705	0.83	-0.4
4,468,765	+		DZA65_RS20705	0.83	-1.6
4,468,765	+		DZA65_RS20705	0.83	-0.5
4,468,765	+		DZA65_RS20705	0.83	+0.6
4,468,766	-		DZA65_RS20705	0.83	-1.6
4,468,766	-		DZA65_RS20705	0.83	+1.3
4,468,766	-		DZA65_RS20705	0.83	-0.1
4,468,766	-		DZA65_RS20705	0.83	+3.0
4,468,766	-		DZA65_RS20705	0.83	+1.0
4,468,766	-		DZA65_RS20705	0.83	-1.2
4,468,798	+		DZA65_RS20705	0.86	-2.3
4,468,798	+		DZA65_RS20705	0.86	-0.0
4,468,798	+		DZA65_RS20705	0.86	-0.3
4,468,798	+		DZA65_RS20705	0.86	-2.3
4,468,798	+		DZA65_RS20705	0.86	-1.6
4,468,799	-		DZA65_RS20705	0.86	+1.3
4,468,799	-		DZA65_RS20705	0.86	-0.3
4,468,799	-		DZA65_RS20705	0.86	-0.1
4,468,799	-		DZA65_RS20705	0.86	-1.2
4,468,799	-		DZA65_RS20705	0.86	-2.7
4,468,799	-		DZA65_RS20705	0.86	-1.8
4,468,813	-		DZA65_RS20705	0.88	+0.3
4,468,813	-		DZA65_RS20705	0.88	-0.6
4,468,813	-		DZA65_RS20705	0.88	+0.5
4,468,849	+				+0.4
4,468,849	+				-0.8
4,468,850	-				-0.0
4,468,855	+				+1.5
4,468,855	+				+0.5
4,468,855	+				+4.1
4,468,855	+				-0.3
4,468,855	+				-0.9
4,468,856	-				+0.1
4,468,856	-				-0.0
4,468,856	-				+2.0
4,468,856	-				-1.0
4,468,856	-				-0.0
4,468,856	-				-2.0
4,468,856	-				-0.4
4,468,856	-				+0.8
4,468,856	-				+1.7
4,468,865	+				+0.6
4,468,897	-				-0.6
4,468,897	-				-1.2
4,468,900	+				-2.5
4,468,901	-				+1.1
4,468,901	-				+0.4
4,468,901	-				-1.6
4,468,901	-				+0.3
4,468,947	+				-0.5
4,468,947	+				+0.7
4,468,947	+				-0.1
4,468,947	+				+0.8
4,468,948	-				-1.6
4,468,952	-				+0.4
4,468,952	-				-2.3
4,469,041	+				+1.4
4,469,041	+				+1.2
4,469,042	-				-2.0
4,469,054	-				-0.4
4,469,056	+				+0.8
4,469,056	+				-1.0
4,469,056	+				-0.6
4,469,059	+				-0.3
4,469,059	+				+0.4
4,469,059	+				-1.0
4,469,059	+				-1.3
4,469,059	+				-0.3
4,469,060	-				-1.8
4,469,060	-				-0.6
4,469,060	-				+0.3
4,469,060	-				-0.4
4,469,060	-				-1.1
4,469,060	-				-0.6
4,469,060	-				+0.7
4,469,060	-				+0.8
4,469,060	-				-1.6
4,469,060	-				-0.5
4,469,060	-				-1.0
4,469,060	-				+1.6
4,469,060	-				+0.8
4,469,061	+				-0.4
4,469,062	-				+0.8
4,469,072	+				+0.2
4,469,072	+				-0.0
4,469,072	+				-1.5
4,469,072	+				-0.6
4,469,072	+				-2.0
4,469,072	+				-1.3
4,469,072	+				-0.2
4,469,072	+				-0.8
4,469,073	-				+0.2
4,469,075	+				+0.5
4,469,075	+				-0.2
4,469,075	+				-0.1
4,469,075	+				+0.2
4,469,075	+				+0.3
4,469,076	-				-0.6
4,469,076	-				+0.6
4,469,076	-				-0.5
4,469,076	-				+0.6
4,469,076	-				+0.5
4,469,076	-				+0.6
4,469,105	-				+0.3
4,469,105	-				+2.0
4,469,140	+				-0.9
4,469,140	+				-0.3
4,469,140	+				-0.9
4,469,140	+				-0.3
4,469,140	+				-0.0
4,469,140	+				-2.0
4,469,141	-				+2.0
4,469,141	-				+1.0
4,469,141	-				-0.0
4,469,141	-				-0.8
4,469,141	-				-0.4
4,469,141	-				+0.4
4,469,141	-				+0.9
4,469,142	+				+2.0
4,469,142	+				+0.6
4,469,142	+				+2.1
4,469,143	-				+0.4
4,469,166	-				+1.4
4,469,169	+				-0.5
4,469,170	-				-0.1
4,469,184	+				+0.3
4,469,185	-				+0.3
4,469,197	-				-0.8
4,469,200	+				+0.3
4,469,201	-				-0.4
4,469,201	-				+1.1
4,469,201	-				+1.2
4,469,204	+				-2.3
4,469,204	+				-0.3
4,469,204	+				-0.6
4,469,204	+				-0.8
4,469,204	+				-0.4
4,469,205	-				+0.4
4,469,205	-				-0.2
4,469,207	+				-0.0
4,469,207	+				-1.4
4,469,207	+				-1.7
4,469,208	-				+1.8
4,469,260	+				-3.1
4,469,261	-				-0.0
4,469,261	-				+0.3
4,469,314	-				+2.2
4,469,350	+				+0.2
4,469,350	+				+1.8
4,469,350	+				-0.6
4,469,351	-				-1.0
4,469,351	-				+3.6
4,469,351	-				-0.2
4,469,351	-				-1.8
4,469,351	-				+1.3
4,469,351	-				-0.3
4,469,354	+				-1.0
4,469,354	+				-0.2
4,469,354	+				-0.4
4,469,354	+				+1.9
4,469,354	+				-0.2
4,469,355	-				+1.2
4,469,355	-				-2.2
4,469,355	-				-0.1
4,469,355	-				+0.6
4,469,355	-				-0.0
4,469,355	-				-0.0
4,469,355	-				+0.7
4,469,358	+				+0.1
4,469,358	+				-0.0
4,469,359	-				-1.6
4,469,359	-				+0.7
4,469,359	-				-1.4
4,469,359	-				+0.7
4,469,370	-				-0.0
4,469,370	-				+1.4
4,469,370	-				-0.4
4,469,370	-				+0.6
4,469,394	-				+1.2
4,469,394	-				-0.3
4,469,394	-				-1.9
4,469,394	-				-1.0
4,469,444	+				+0.2
4,469,444	+				+0.3
4,469,444	+				+0.4
4,469,444	+				-1.0
4,469,444	+				-1.1
4,469,444	+				+0.6
4,469,444	+				+0.9
4,469,444	+				+0.9
4,469,444	+				-0.5
4,469,444	+				+0.1
4,469,444	+				+0.4
4,469,444	+				+1.6
4,469,445	-				+0.7
4,469,445	-				+0.4
4,469,445	-				-2.0
4,469,445	-				-0.8
4,469,445	-				-0.3
4,469,445	-				-1.3
4,469,445	-				+0.4
4,469,445	-				+2.5
4,469,445	-				-0.6
4,469,445	-				-1.6
4,469,445	-				+0.2
4,469,446	+				-0.8
4,469,447	-				-1.2
4,469,464	+				-0.9
4,469,464	+				-0.0
4,469,465	-				+0.5
4,469,553	+				-1.0
4,469,587	+				+0.2
4,469,588	-				+1.9
4,469,588	-				+0.2
4,469,589	+				-0.5
4,469,589	+				+0.6
4,469,589	+				-0.6
4,469,590	-				-1.0
4,469,611	-				-0.6
4,469,652	+		DZA65_RS20710	0.13	-0.1
4,469,704	-		DZA65_RS20710	0.18	+1.0
4,469,704	-		DZA65_RS20710	0.18	+0.0
4,469,730	+		DZA65_RS20710	0.20	-0.0
4,469,730	+		DZA65_RS20710	0.20	+0.2
4,469,730	+		DZA65_RS20710	0.20	-0.4
4,469,730	+		DZA65_RS20710	0.20	-0.9
4,469,730	+		DZA65_RS20710	0.20	+0.9
4,469,730	+		DZA65_RS20710	0.20	-0.4
4,469,731	-		DZA65_RS20710	0.20	-0.3
4,469,731	-		DZA65_RS20710	0.20	+0.2
4,469,734	+		DZA65_RS20710	0.20	-1.2
4,469,734	+		DZA65_RS20710	0.20	-2.3
4,469,734	+		DZA65_RS20710	0.20	+3.2
4,469,734	+		DZA65_RS20710	0.20	-0.3
4,469,734	+		DZA65_RS20710	0.20	-0.6
4,469,734	+		DZA65_RS20710	0.20	+0.6
4,469,734	+		DZA65_RS20710	0.20	-1.6
4,469,735	-		DZA65_RS20710	0.20	-1.3
4,469,735	-		DZA65_RS20710	0.20	+1.5
4,469,735	-		DZA65_RS20710	0.20	-1.5
4,469,735	-		DZA65_RS20710	0.20	-2.3
4,469,735	-		DZA65_RS20710	0.20	+1.0
4,469,735	-		DZA65_RS20710	0.20	-1.3
4,469,735	-		DZA65_RS20710	0.20	-1.5
4,469,736	+		DZA65_RS20710	0.20	-1.2
4,469,871	+		DZA65_RS20710	0.32	-1.6
4,469,888	+		DZA65_RS20710	0.34	-0.8
4,469,909	+		DZA65_RS20710	0.36	-0.2
4,469,909	+		DZA65_RS20710	0.36	-0.3
4,469,909	+		DZA65_RS20710	0.36	-0.0
4,469,909	+		DZA65_RS20710	0.36	+0.6
4,469,909	+		DZA65_RS20710	0.36	-0.2
4,469,909	+		DZA65_RS20710	0.36	-0.0
4,469,910	-		DZA65_RS20710	0.36	-0.6
4,469,912	+		DZA65_RS20710	0.36	-0.2
4,469,912	+		DZA65_RS20710	0.36	+0.7
4,469,912	+		DZA65_RS20710	0.36	-0.8
4,469,913	-		DZA65_RS20710	0.36	-0.5
4,469,913	-		DZA65_RS20710	0.36	+2.6
4,469,913	-		DZA65_RS20710	0.36	+0.0
4,469,913	-		DZA65_RS20710	0.36	+1.3
4,469,925	+		DZA65_RS20710	0.37	+0.3
4,469,932	+		DZA65_RS20710	0.38	+1.5
4,469,961	+		DZA65_RS20710	0.40	+1.0
4,469,961	+		DZA65_RS20710	0.40	+0.4
4,469,961	+		DZA65_RS20710	0.40	-0.7
4,469,961	+		DZA65_RS20710	0.40	+2.0
4,469,961	+		DZA65_RS20710	0.40	+0.4
4,469,961	+		DZA65_RS20710	0.40	+1.0
4,469,962	-		DZA65_RS20710	0.40	+1.0
4,469,962	-		DZA65_RS20710	0.40	+1.2
4,469,962	-		DZA65_RS20710	0.40	+1.4
4,469,962	-		DZA65_RS20710	0.40	-0.9
4,470,057	+		DZA65_RS20710	0.49	+1.2
4,470,058	-		DZA65_RS20710	0.49	+1.7
4,470,058	-		DZA65_RS20710	0.49	-0.7
4,470,058	-		DZA65_RS20710	0.49	+0.5
4,470,058	-		DZA65_RS20710	0.49	+1.0
4,470,097	+		DZA65_RS20710	0.52	-0.8
4,470,097	+		DZA65_RS20710	0.52	-0.1
4,470,097	+		DZA65_RS20710	0.52	-0.6
4,470,097	+		DZA65_RS20710	0.52	-0.2
4,470,097	+		DZA65_RS20710	0.52	-1.9
4,470,097	+				-0.6
4,470,097	+		DZA65_RS20710	0.52	+0.2
4,470,097	+		DZA65_RS20710	0.52	-2.2
4,470,097	+		DZA65_RS20710	0.52	-1.3
4,470,097	+		DZA65_RS20710	0.52	-1.0
4,470,097	+		DZA65_RS20710	0.52	+1.1
4,470,097	+		DZA65_RS20710	0.52	+0.9
4,470,097	+		DZA65_RS20710	0.52	-0.2
4,470,098	-		DZA65_RS20710	0.52	+0.3
4,470,098	-		DZA65_RS20710	0.52	+0.2
4,470,098	-		DZA65_RS20710	0.52	+0.0
4,470,098	-		DZA65_RS20710	0.52	+1.4
4,470,098	-		DZA65_RS20710	0.52	+0.4
4,470,098	-		DZA65_RS20710	0.52	-1.0
4,470,098	-		DZA65_RS20710	0.52	+0.0
4,470,098	-		DZA65_RS20710	0.52	-3.0
4,470,098	-		DZA65_RS20710	0.52	-0.5
4,470,098	-		DZA65_RS20710	0.52	-0.1
4,470,098	-		DZA65_RS20710	0.52	-0.3
4,470,098	-		DZA65_RS20710	0.52	-0.8
4,470,098	-		DZA65_RS20710	0.52	-0.6
4,470,113	-		DZA65_RS20710	0.54	-0.0
4,470,113	-		DZA65_RS20710	0.54	-1.5
4,470,190	+		DZA65_RS20710	0.61	-1.3
4,470,190	+		DZA65_RS20710	0.61	+0.3
4,470,190	+		DZA65_RS20710	0.61	-1.3
4,470,191	-		DZA65_RS20710	0.61	-0.9
4,470,191	-		DZA65_RS20710	0.61	+0.3
4,470,191	-		DZA65_RS20710	0.61	-0.1
4,470,191	-		DZA65_RS20710	0.61	+1.0
4,470,191	-		DZA65_RS20710	0.61	+2.2
4,470,191	-		DZA65_RS20710	0.61	-1.2
4,470,191	-		DZA65_RS20710	0.61	-1.9
4,470,191	-		DZA65_RS20710	0.61	-1.6
4,470,191	-		DZA65_RS20710	0.61	-1.6
4,470,205	+		DZA65_RS20710	0.62	+0.2
4,470,205	+		DZA65_RS20710	0.62	+0.4
4,470,205	+		DZA65_RS20710	0.62	+1.0
4,470,205	+		DZA65_RS20710	0.62	-0.3
4,470,205	+		DZA65_RS20710	0.62	-0.7
4,470,205	+		DZA65_RS20710	0.62	+0.1
4,470,205	+		DZA65_RS20710	0.62	-0.7
4,470,206	-		DZA65_RS20710	0.62	+0.6
4,470,206	-		DZA65_RS20710	0.62	-1.6
4,470,206	-		DZA65_RS20710	0.62	-1.0
4,470,206	-		DZA65_RS20710	0.62	-0.0
4,470,206	-		DZA65_RS20710	0.62	-0.2
4,470,206	-		DZA65_RS20710	0.62	+0.6
4,470,259	+		DZA65_RS20710	0.67	+1.2
4,470,259	+		DZA65_RS20710	0.67	-0.0
4,470,259	+		DZA65_RS20710	0.67	-0.2
4,470,259	+		DZA65_RS20710	0.67	+0.2
4,470,259	+		DZA65_RS20710	0.67	-2.2
4,470,260	-		DZA65_RS20710	0.67	-1.6
4,470,260	-		DZA65_RS20710	0.67	+0.4
4,470,260	-		DZA65_RS20710	0.67	+0.2
4,470,260	-		DZA65_RS20710	0.67	+2.0
4,470,260	-		DZA65_RS20710	0.67	-0.0
4,470,260	-		DZA65_RS20710	0.67	-1.8
4,470,260	-		DZA65_RS20710	0.67	-1.7
4,470,260	-		DZA65_RS20710	0.67	+1.0
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