Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18680

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,022,467	+				+0.1
4,022,535	+				+0.3
4,022,536	-				-1.2
4,022,536	-				-0.5
4,022,549	+				-0.1
4,022,557	-				-1.9
4,022,557	-				-1.3
4,022,558	+				-1.7
4,022,559	-				-0.9
4,022,570	-				+1.0
4,022,579	-				-0.6
4,022,582	+				+2.3
4,022,615	-				-0.8
4,022,638	-				-0.4
4,022,718	+				+1.7
4,022,719	-				-1.1
4,022,719	-				+0.0
4,022,766	+				+0.8
4,022,796	+				-0.5
4,022,796	+				+1.5
4,022,796	+				-1.5
4,022,796	+				-1.3
4,022,796	+				-0.3
4,022,796	+				+1.5
4,022,796	+				-0.7
4,022,796	+				+0.9
4,022,797	-				-0.0
4,022,797	-				+0.1
4,022,797	-				+0.2
4,022,797	-				+1.6
4,022,797	-				+1.6
4,022,797	-				+0.6
4,022,797	-				+0.4
4,022,797	-				+0.4
4,022,797	-				-0.7
4,022,797	-				+0.2
4,022,797	-				+0.5
4,022,797	-				+0.3
4,022,797	-				-0.3
4,022,797	-				-1.5
4,022,797	-				-1.1
4,022,859	+		DZA65_RS18675	0.16	+1.1
4,022,859	+		DZA65_RS18675	0.16	+1.3
4,022,859	+		DZA65_RS18675	0.16	-0.7
4,022,859	+		DZA65_RS18675	0.16	+0.0
4,022,859	+		DZA65_RS18675	0.16	+2.0
4,022,860	-		DZA65_RS18675	0.16	-1.5
4,022,860	-		DZA65_RS18675	0.16	+0.1
4,022,860	-		DZA65_RS18675	0.16	+0.1
4,022,860	-		DZA65_RS18675	0.16	-0.6
4,022,860	-		DZA65_RS18675	0.16	+1.2
4,022,860	-				-0.5
4,022,920	+		DZA65_RS18675	0.26	+1.4
4,022,921	-		DZA65_RS18675	0.26	-0.4
4,022,961	+		DZA65_RS18675	0.33	+0.4
4,022,961	+		DZA65_RS18675	0.33	-1.3
4,022,961	+		DZA65_RS18675	0.33	-0.1
4,022,961	+		DZA65_RS18675	0.33	+0.9
4,022,961	+		DZA65_RS18675	0.33	+0.6
4,022,962	-		DZA65_RS18675	0.33	-0.4
4,022,962	-		DZA65_RS18675	0.33	-1.7
4,022,974	+		DZA65_RS18675	0.35	-0.5
4,022,975	-		DZA65_RS18675	0.35	+0.0
4,022,975	-		DZA65_RS18675	0.35	-2.3
4,022,975	-		DZA65_RS18675	0.35	+0.1
4,022,977	+		DZA65_RS18675	0.35	+0.3
4,023,068	+		DZA65_RS18675	0.50	+0.5
4,023,068	+		DZA65_RS18675	0.50	+1.0
4,023,068	+		DZA65_RS18675	0.50	-0.0
4,023,068	+		DZA65_RS18675	0.50	-0.9
4,023,072	+		DZA65_RS18675	0.51	+0.7
4,023,100	+		DZA65_RS18675	0.55	+1.8
4,023,100	+		DZA65_RS18675	0.55	-1.5
4,023,183	+		DZA65_RS18675	0.69	+0.1
4,023,183	+		DZA65_RS18675	0.69	-1.6
4,023,184	-		DZA65_RS18675	0.69	-0.5
4,023,184	-		DZA65_RS18675	0.69	+0.1
4,023,184	-		DZA65_RS18675	0.69	+1.0
4,023,184	-		DZA65_RS18675	0.69	-0.1
4,023,184	-		DZA65_RS18675	0.69	-0.2
4,023,184	-		DZA65_RS18675	0.69	-0.7
4,023,196	+		DZA65_RS18675	0.71	-1.6
4,023,196	+		DZA65_RS18675	0.71	+0.5
4,023,197	-		DZA65_RS18675	0.71	+2.1
4,023,197	-		DZA65_RS18675	0.71	-0.4
4,023,200	+		DZA65_RS18675	0.71	-1.7
4,023,201	-		DZA65_RS18675	0.72	-0.6
4,023,201	-		DZA65_RS18675	0.72	+0.2
4,023,201	-		DZA65_RS18675	0.72	+0.9
4,023,251	+		DZA65_RS18675	0.80	-1.1
4,023,251	+		DZA65_RS18675	0.80	-1.6
4,023,251	+		DZA65_RS18675	0.80	+0.2
4,023,251	+		DZA65_RS18675	0.80	+0.9
4,023,251	+		DZA65_RS18675	0.80	+0.8
4,023,252	-		DZA65_RS18675	0.80	-1.9
4,023,252	-		DZA65_RS18675	0.80	-0.4
4,023,252	-		DZA65_RS18675	0.80	+0.3
4,023,252	-		DZA65_RS18675	0.80	-0.0
4,023,252	-		DZA65_RS18675	0.80	+0.0
4,023,281	+		DZA65_RS18675	0.85	-0.4
4,023,282	-		DZA65_RS18675	0.85	-0.5
4,023,288	-		DZA65_RS18675	0.86	+0.2
4,023,367	-				+1.3
4,023,367	-				+0.8
4,023,367	-				-0.7
4,023,367	-				+1.3
4,023,367	-				-1.9
4,023,393	+				-0.7
4,023,393	+				-1.4
4,023,393	+				-2.6
4,023,393	+				-0.7
4,023,393	+				-0.3
4,023,393	+				-0.7
4,023,393	+				-0.3
4,023,393	+				+1.4
4,023,393	+				+0.9
4,023,393	+				-1.6
4,023,394	-				+0.5
4,023,394	-				+0.0
4,023,394	-				+0.0
4,023,394	-				-1.7
4,023,394	-				+0.7
4,023,394	-				-2.1
4,023,394	-				-0.9
4,023,394	-				-0.1
4,023,395	+				-0.7
4,023,395	+				+0.1
4,023,395	+				+1.6
4,023,395	+				+0.3
4,023,396	-				+0.4
4,023,396	-				+0.4
4,023,396	-				+2.1
4,023,396	-				+0.3
4,023,396	-				-1.3
4,023,396	-				-1.6
4,023,396	-				-1.9
4,023,396	-				-1.7
4,023,409	+				-2.0
4,023,409	+				+0.5
4,023,452	+				+0.2
4,023,492	-				-0.1
4,023,497	+				-0.1
4,023,498	-				-1.1
4,023,523	-				+0.6
4,023,526	-				-1.0
4,023,612	+		DZA65_RS18680	0.16	-1.9
4,023,640	-		DZA65_RS18680	0.19	-0.5
4,023,768	+		DZA65_RS18680	0.29	-0.1
4,023,768	+		DZA65_RS18680	0.29	-0.9
4,023,854	+		DZA65_RS18680	0.37	-0.4
4,023,854	+				+0.9
4,023,854	+		DZA65_RS18680	0.37	+0.3
4,023,854	+		DZA65_RS18680	0.37	-3.6
4,023,854	+		DZA65_RS18680	0.37	+0.8
4,023,854	+		DZA65_RS18680	0.37	-0.4
4,023,854	+		DZA65_RS18680	0.37	-0.7
4,023,854	+		DZA65_RS18680	0.37	+1.0
4,023,854	+		DZA65_RS18680	0.37	+0.1
4,023,854	+		DZA65_RS18680	0.37	-1.1
4,023,854	+		DZA65_RS18680	0.37	+0.9
4,023,854	+		DZA65_RS18680	0.37	-0.5
4,023,855	-		DZA65_RS18680	0.37	-1.5
4,023,855	-		DZA65_RS18680	0.37	-1.7
4,023,855	-		DZA65_RS18680	0.37	-1.9
4,023,855	-		DZA65_RS18680	0.37	-0.0
4,023,855	-		DZA65_RS18680	0.37	-2.1
4,023,855	-		DZA65_RS18680	0.37	+2.2
4,023,855	-		DZA65_RS18680	0.37	-2.1
4,023,855	-		DZA65_RS18680	0.37	-1.5
4,023,855	-		DZA65_RS18680	0.37	+0.3
4,023,855	-		DZA65_RS18680	0.37	+0.9
4,023,855	-		DZA65_RS18680	0.37	-0.9
4,023,855	-		DZA65_RS18680	0.37	+1.3
4,023,855	-		DZA65_RS18680	0.37	-0.7
4,023,855	-		DZA65_RS18680	0.37	-2.1
4,023,855	-		DZA65_RS18680	0.37	-2.8
4,023,855	-				+0.9
4,023,855	-		DZA65_RS18680	0.37	-0.6
4,023,859	-		DZA65_RS18680	0.37	-0.5
4,023,864	+		DZA65_RS18680	0.37	+0.2
4,023,864	+		DZA65_RS18680	0.37	-0.5
4,023,864	+		DZA65_RS18680	0.37	+1.2
4,023,865	-		DZA65_RS18680	0.38	+0.6
4,023,865	-		DZA65_RS18680	0.38	-3.0
4,023,902	+		DZA65_RS18680	0.41	-2.3
4,023,902	+		DZA65_RS18680	0.41	-1.1
4,023,902	+		DZA65_RS18680	0.41	-3.3
4,023,902	+		DZA65_RS18680	0.41	+3.9
4,023,902	+		DZA65_RS18680	0.41	-1.5
4,023,903	-				-0.1
4,024,059	+		DZA65_RS18680	0.54	-0.5
4,024,095	+		DZA65_RS18680	0.57	-1.1
4,024,096	-		DZA65_RS18680	0.57	-0.8
4,024,170	+		DZA65_RS18680	0.63	-0.1
4,024,266	+		DZA65_RS18680	0.71	-0.1
4,024,266	+		DZA65_RS18680	0.71	-0.8
4,024,267	-		DZA65_RS18680	0.71	-1.6
4,024,267	-		DZA65_RS18680	0.71	-1.1
4,024,267	-		DZA65_RS18680	0.71	+1.8
4,024,343	+		DZA65_RS18680	0.78	+0.1
4,024,343	+		DZA65_RS18680	0.78	+0.1
4,024,343	+		DZA65_RS18680	0.78	+0.1
4,024,343	+		DZA65_RS18680	0.78	-1.5
4,024,344	-		DZA65_RS18680	0.78	-0.1
4,024,438	-		DZA65_RS18680	0.86	-0.1
4,024,467	+		DZA65_RS18680	0.88	-2.3
4,024,467	+		DZA65_RS18680	0.88	+0.4
4,024,468	-		DZA65_RS18680	0.88	-0.6
4,024,521	+				-2.1
4,024,521	+				+0.3
4,024,521	+				+0.2
4,024,521	+				+1.7
4,024,522	-				+0.4
4,024,522	-				+1.3
4,024,522	-				-0.5
4,024,522	-				-0.6
4,024,568	+				-0.1
4,024,568	+				-0.9
4,024,568	+				-1.0
4,024,568	+				-0.9
4,024,569	-				-1.5
4,024,569	-				+0.3
4,024,569	-				-0.9
4,024,603	+				-0.1
4,024,603	+				-0.0
4,024,603	+				+2.0
4,024,603	+				-2.4
4,024,603	+				-1.5
4,024,603	+				+0.6
4,024,604	-				-2.5
4,024,604	-				-1.0
4,024,604	-				+1.4
4,024,604	-				-2.3
4,024,608	+				+1.2
4,024,608	+				-0.1
4,024,608	+				-0.5
4,024,608	+				-0.1
4,024,608	+				-2.7
4,024,608	+				-0.6
4,024,608	+				-0.3
4,024,608	+				-0.7
4,024,609	-				-0.1
4,024,609	-				-1.7
4,024,609	-				-1.5
4,024,609	-				+0.3
4,024,609	-				+0.1
4,024,613	+				-0.1
4,024,613	+				+0.9
4,024,692	-				-0.7
4,024,692	-				-1.5
4,024,732	+				-0.9
4,024,732	+				-0.3
4,024,732	+				+1.3
4,024,732	+				+0.3
4,024,732	+				-0.1
4,024,732	+				+0.3
4,024,732	+				+0.8
4,024,732	+				+0.2
4,024,732	+				-0.4
4,024,732	+				+0.3
4,024,732	+				+0.2
4,024,732	+				+0.9
4,024,732	+				-1.1
4,024,733	-				-2.5
4,024,733	-				-1.5
4,024,733	-				+0.1
4,024,733	-				-0.6
4,024,733	-				+1.0
4,024,733	-				-1.3
4,024,733	-				-0.7
4,024,733	-				+1.1
4,024,733	-				+0.6
4,024,734	+				+1.9
4,024,734	+				-1.5
4,024,734	+				-0.1
4,024,734	+				+0.7
4,024,734	+				-1.7
4,024,734	+				-2.0
4,024,734	+				-2.5
4,024,734	+				+1.0
4,024,734	+				-0.4
4,024,734	+				+0.9
4,024,734	+				+0.9
4,024,734	+				+0.5
4,024,734	+				+0.9
4,024,734	+				-0.7
4,024,734	+				-0.7
4,024,734	+				-0.0
4,024,734	+				-1.5
4,024,734	+				-0.9
4,024,734	+				-0.5
4,024,734	+				-1.3
4,024,734	+				-0.4
4,024,735	-				+1.2
4,024,735	-				-0.3
4,024,735	-				-0.1
4,024,735	-				-0.1
4,024,735	-				-0.1
4,024,735	-				-1.1
4,024,735	-				+1.1
4,024,735	-				-0.7
4,024,735	-				-1.3
4,024,735	-				-1.3
4,024,735	-				+0.7
4,024,735	-				-0.7
4,024,735	-				-0.1
4,024,735	-				-0.0
4,024,735	-				+1.9
4,024,735	-				-0.2
4,024,735	-				+0.7
4,024,735	-				-2.6
4,024,735	-				+0.7
4,024,735	-				+2.4
4,024,735	-				-0.7
4,024,735	-				-0.6
4,024,736	+				+0.4
4,024,736	+				+0.8
4,024,736	+				-1.5
4,024,736	+				+0.7
4,024,736	+				+0.2
4,024,736	+				-0.7
4,024,736	+				+1.4
4,024,736	+				+0.9
4,024,736	+				+0.1
4,024,736	+				+1.2
4,024,736	+				+0.4
4,024,736	+				-2.3
4,024,736	+				-0.8
4,024,736	+				+1.0
4,024,737	-				+1.9
4,024,737	-				-1.7
4,024,737	-				+0.2
4,024,737	-				+0.1
4,024,737	-				-0.2
4,024,737	-				-0.1
4,024,737	-				-0.7
4,024,737	-				+0.6
4,024,737	-				-0.6
4,024,737	-				-0.9
4,024,846	+				-0.6
4,024,846	+				-1.1
4,024,846	+				-1.1
4,024,854	+				+0.9
4,024,859	+				+0.1
4,024,859	+				-1.3
4,024,859	+				-2.5
4,024,992	+				+0.2
4,025,021	+				+0.4
4,025,022	-				+0.6
4,025,022	-				-0.0
4,025,072	+				+0.7
4,025,072	+				+0.3
4,025,072	+				-0.3
4,025,073	-				+0.4
4,025,073	-				-0.7
4,025,073	-				+0.2
4,025,081	+				-1.9
4,025,081	+				+1.4
4,025,081	+				-0.1
4,025,082	-				-0.1
4,025,082	-				+0.4
4,025,082	-				-0.7
4,025,083	+				+0.3
4,025,084	-				+0.9
4,025,106	-				-0.5
4,025,106	-				+2.2
4,025,108	+				+1.6
4,025,109	-				-1.5
4,025,109	-				-1.3
4,025,109	-				-0.1
4,025,109	-				+0.8
4,025,132	+				-0.3
4,025,132	+				-0.1
4,025,132	+				-0.4
4,025,132	+				-0.8
4,025,133	-				-0.1
4,025,192	+				+0.4
4,025,192	+				-0.1
4,025,193	-				-1.1
4,025,193	-				+0.1
4,025,201	+				-0.1
4,025,201	+				+1.3
4,025,201	+				+0.7
4,025,202	-				-0.9
4,025,252	+				-0.9
4,025,252	+				+0.9
4,025,252	+				-0.1
4,025,252	+				+0.9
4,025,253	-				-1.3
4,025,253	-				-0.1
4,025,262	-				-0.4
4,025,287	+				-0.1
4,025,287	+				+0.1
4,025,287	+				+0.2
4,025,287	+				+0.9
4,025,287	+				-0.8
4,025,287	+				+0.0
4,025,287	+				+0.9
4,025,287	+				+0.7
4,025,287	+				-1.9
4,025,287	+				+2.1
4,025,287	+				-0.7
4,025,288	-				-0.1
4,025,288	-				+0.3
4,025,288	-				-1.6
4,025,288	-				-1.5
4,025,288	-				-0.7
4,025,288	-				-1.3
4,025,288	-				+0.7
4,025,288	-				-2.1
4,025,288	-				+1.2
4,025,288	-				+1.3
4,025,288	-				-1.7
4,025,288	-				+0.4
4,025,288	-				-0.6
4,025,303	+				+0.4
4,025,303	+				+0.6
4,025,304	-				+0.9
4,025,304	-				-0.2
4,025,321	+				+0.8
4,025,337	+				+1.2
4,025,337	+				+1.4
4,025,337	+				+0.7
4,025,337	+				-0.4
4,025,337	+				-0.3
4,025,337	+				-0.9
4,025,338	-				+0.3
4,025,338	-				-0.6
4,025,338	-				+0.0
4,025,338	-				-0.9
4,025,338	-				+1.1
4,025,338	-				-0.3
4,025,338	-				-1.5
4,025,338	-				-2.5
4,025,338	-				-0.5
4,025,338	-				+0.4
4,025,338	-				-0.2
4,025,353	+				+0.4
4,025,372	+				+0.4
4,025,373	-				-1.1
4,025,373	-				+0.5
4,025,381	+				-0.7
4,025,381	+				+1.5
4,025,432	+				-0.7
4,025,432	+				+1.2
4,025,433	-				+1.4
4,025,442	-				+0.9
4,025,442	-				-0.3
4,025,442	-				-0.1
4,025,442	-				-0.1
4,025,459	-				-0.4
4,025,459	-				+2.5
4,025,493	-				-2.6
4,025,528	-				+1.3
4,025,552	+				-0.1
4,025,552	+				-0.1
4,025,552	+				+0.1
4,025,553	-				+0.1
4,025,553	-				+0.6
4,025,562	-				-0.4