Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17910

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,854,076	+		DZA65_RS17905	0.16	-1.5
3,854,076	+		DZA65_RS17905	0.16	+0.6
3,854,076	+		DZA65_RS17905	0.16	-0.8
3,854,076	+		DZA65_RS17905	0.16	-0.2
3,854,077	-		DZA65_RS17905	0.17	+0.5
3,854,077	-		DZA65_RS17905	0.17	-0.8
3,854,077	-		DZA65_RS17905	0.17	-0.8
3,854,147	+		DZA65_RS17905	0.23	-0.2
3,854,147	+		DZA65_RS17905	0.23	-1.8
3,854,147	+		DZA65_RS17905	0.23	-1.0
3,854,148	-		DZA65_RS17905	0.23	+1.4
3,854,148	-		DZA65_RS17905	0.23	-0.2
3,854,148	-		DZA65_RS17905	0.23	-0.9
3,854,214	+		DZA65_RS17905	0.28	-0.6
3,854,214	+		DZA65_RS17905	0.28	-0.9
3,854,214	+		DZA65_RS17905	0.28	-0.7
3,854,215	-		DZA65_RS17905	0.28	+0.2
3,854,215	-		DZA65_RS17905	0.28	+0.0
3,854,215	-		DZA65_RS17905	0.28	-0.2
3,854,215	-		DZA65_RS17905	0.28	+0.2
3,854,215	-		DZA65_RS17905	0.28	-0.7
3,854,215	-		DZA65_RS17905	0.28	+0.1
3,854,219	+		DZA65_RS17905	0.29	+0.9
3,854,219	+		DZA65_RS17905	0.29	-0.2
3,854,219	+		DZA65_RS17905	0.29	+1.0
3,854,219	+				+0.8
3,854,219	+		DZA65_RS17905	0.29	+3.6
3,854,219	+		DZA65_RS17905	0.29	+0.6
3,854,219	+		DZA65_RS17905	0.29	-0.2
3,854,219	+		DZA65_RS17905	0.29	+0.2
3,854,219	+		DZA65_RS17905	0.29	+1.8
3,854,219	+		DZA65_RS17905	0.29	-0.1
3,854,219	+		DZA65_RS17905	0.29	-1.2
3,854,219	+		DZA65_RS17905	0.29	-0.7
3,854,219	+		DZA65_RS17905	0.29	+1.2
3,854,219	+		DZA65_RS17905	0.29	+0.4
3,854,220	-		DZA65_RS17905	0.29	+0.5
3,854,220	-		DZA65_RS17905	0.29	-1.8
3,854,220	-		DZA65_RS17905	0.29	-0.9
3,854,220	-		DZA65_RS17905	0.29	+0.5
3,854,220	-		DZA65_RS17905	0.29	-0.4
3,854,220	-		DZA65_RS17905	0.29	-0.2
3,854,220	-		DZA65_RS17905	0.29	+3.6
3,854,220	-		DZA65_RS17905	0.29	-0.8
3,854,220	-		DZA65_RS17905	0.29	+0.4
3,854,220	-		DZA65_RS17905	0.29	+0.8
3,854,220	-		DZA65_RS17905	0.29	-2.2
3,854,220	-		DZA65_RS17905	0.29	+1.5
3,854,220	-		DZA65_RS17905	0.29	-0.8
3,854,220	-		DZA65_RS17905	0.29	-2.0
3,854,220	-		DZA65_RS17905	0.29	-0.3
3,854,257	+		DZA65_RS17905	0.32	-1.2
3,854,258	-		DZA65_RS17905	0.32	-0.5
3,854,425	+		DZA65_RS17905	0.46	+0.8
3,854,425	+		DZA65_RS17905	0.46	-0.9
3,854,425	+		DZA65_RS17905	0.46	+0.8
3,854,425	+		DZA65_RS17905	0.46	+0.8
3,854,425	+		DZA65_RS17905	0.46	+0.1
3,854,426	-		DZA65_RS17905	0.46	-1.5
3,854,426	-		DZA65_RS17905	0.46	-1.2
3,854,426	-				-0.8
3,854,426	-		DZA65_RS17905	0.46	+0.6
3,854,434	-		DZA65_RS17905	0.47	-1.8
3,854,536	-		DZA65_RS17905	0.56	-0.2
3,854,536	-		DZA65_RS17905	0.56	-0.2
3,854,557	+		DZA65_RS17905	0.57	-0.2
3,854,557	+		DZA65_RS17905	0.57	-1.2
3,854,557	+		DZA65_RS17905	0.57	-0.6
3,854,557	+		DZA65_RS17905	0.57	-0.4
3,854,557	+		DZA65_RS17905	0.57	+0.2
3,854,557	+		DZA65_RS17905	0.57	-0.2
3,854,557	+		DZA65_RS17905	0.57	-0.8
3,854,557	+		DZA65_RS17905	0.57	+0.0
3,854,558	-		DZA65_RS17905	0.57	-0.8
3,854,558	-		DZA65_RS17905	0.57	-0.8
3,854,558	-		DZA65_RS17905	0.57	+2.0
3,854,719	+		DZA65_RS17905	0.71	+0.6
3,854,719	+		DZA65_RS17905	0.71	+0.8
3,854,719	+		DZA65_RS17905	0.71	+0.6
3,854,720	-		DZA65_RS17905	0.71	+1.2
3,854,737	+		DZA65_RS17905	0.73	-0.9
3,854,737	+		DZA65_RS17905	0.73	-2.2
3,854,737	+		DZA65_RS17905	0.73	+0.8
3,854,737	+				+0.8
3,854,738	-		DZA65_RS17905	0.73	+0.4
3,854,738	-		DZA65_RS17905	0.73	+0.3
3,854,738	-		DZA65_RS17905	0.73	-1.3
3,854,738	-		DZA65_RS17905	0.73	+0.1
3,854,831	+		DZA65_RS17905	0.81	-2.2
3,854,832	-		DZA65_RS17905	0.81	-0.4
3,854,832	-		DZA65_RS17905	0.81	-0.6
3,854,978	-				+0.2
3,855,175	+				+0.6
3,855,175	+				+1.3
3,855,176	-				-1.7
3,855,272	+		DZA65_RS17910	0.13	-0.2
3,855,273	-		DZA65_RS17910	0.13	-1.7
3,855,318	-		DZA65_RS17910	0.16	-0.5
3,855,318	-		DZA65_RS17910	0.16	-1.5
3,855,339	-		DZA65_RS17910	0.17	-0.2
3,855,458	+		DZA65_RS17910	0.25	+0.0
3,855,458	+		DZA65_RS17910	0.25	+1.4
3,855,458	+		DZA65_RS17910	0.25	-0.5
3,855,458	+		DZA65_RS17910	0.25	-0.2
3,855,459	-		DZA65_RS17910	0.25	-1.0
3,855,459	-		DZA65_RS17910	0.25	-0.2
3,855,463	-		DZA65_RS17910	0.25	-1.9
3,855,514	+		DZA65_RS17910	0.29	-0.3
3,855,514	+		DZA65_RS17910	0.29	+0.2
3,855,515	-		DZA65_RS17910	0.29	-0.0
3,855,515	-		DZA65_RS17910	0.29	-0.9
3,855,515	-		DZA65_RS17910	0.29	+0.5
3,855,515	-		DZA65_RS17910	0.29	-0.8
3,855,515	-		DZA65_RS17910	0.29	-1.3
3,855,515	-		DZA65_RS17910	0.29	+0.5
3,855,515	-		DZA65_RS17910	0.29	+1.0
3,855,564	+		DZA65_RS17910	0.32	-0.2
3,855,564	+		DZA65_RS17910	0.32	-0.8
3,855,564	+		DZA65_RS17910	0.32	-0.8
3,855,564	+		DZA65_RS17910	0.32	-1.1
3,855,564	+		DZA65_RS17910	0.32	+1.2
3,855,564	+		DZA65_RS17910	0.32	+0.2
3,855,564	+				+0.8
3,855,565	-		DZA65_RS17910	0.32	-1.4
3,855,565	-		DZA65_RS17910	0.32	-0.1
3,855,565	-		DZA65_RS17910	0.32	-0.5
3,855,565	-		DZA65_RS17910	0.32	-0.4
3,855,601	+		DZA65_RS17910	0.34	-0.8
3,855,707	+		DZA65_RS17910	0.41	-0.0
3,855,708	-		DZA65_RS17910	0.41	+1.8
3,855,881	+		DZA65_RS17910	0.53	-1.2
3,855,881	+		DZA65_RS17910	0.53	-0.7
3,855,899	+		DZA65_RS17910	0.54	-0.8
3,855,899	+		DZA65_RS17910	0.54	+1.5
3,855,922	-		DZA65_RS17910	0.55	+0.2
3,855,937	+		DZA65_RS17910	0.56	+0.3
3,855,938	-		DZA65_RS17910	0.56	+1.3
3,855,938	-		DZA65_RS17910	0.56	+1.9
3,855,938	-		DZA65_RS17910	0.56	-1.4
3,855,972	+		DZA65_RS17910	0.59	-0.8
3,855,973	-		DZA65_RS17910	0.59	+0.9
3,855,973	-		DZA65_RS17910	0.59	-0.2
3,855,973	-		DZA65_RS17910	0.59	-0.6
3,855,975	-		DZA65_RS17910	0.59	-0.0
3,856,027	+		DZA65_RS17910	0.62	+1.4
3,856,027	+		DZA65_RS17910	0.62	+0.6
3,856,027	+		DZA65_RS17910	0.62	-0.5
3,856,058	+		DZA65_RS17910	0.64	+0.2
3,856,059	-		DZA65_RS17910	0.64	+0.6
3,856,059	-		DZA65_RS17910	0.64	-0.8
3,856,059	-		DZA65_RS17910	0.64	-1.5
3,856,059	-		DZA65_RS17910	0.64	+0.7
3,856,102	-		DZA65_RS17910	0.67	+0.8
3,856,102	-		DZA65_RS17910	0.67	-0.8
3,856,102	-		DZA65_RS17910	0.67	+0.5
3,856,102	-		DZA65_RS17910	0.67	+1.3
3,856,102	-		DZA65_RS17910	0.67	-2.8
3,856,116	+		DZA65_RS17910	0.68	-2.2
3,856,128	+		DZA65_RS17910	0.69	-1.1
3,856,128	+		DZA65_RS17910	0.69	+0.3
3,856,128	+		DZA65_RS17910	0.69	-0.5
3,856,128	+		DZA65_RS17910	0.69	-2.2
3,856,128	+		DZA65_RS17910	0.69	+0.5
3,856,130	+				+1.4
3,856,131	-		DZA65_RS17910	0.69	-2.4
3,856,304	+		DZA65_RS17910	0.80	-0.2
3,856,305	-		DZA65_RS17910	0.80	-0.4
3,856,305	-		DZA65_RS17910	0.80	+0.8
3,856,376	+		DZA65_RS17910	0.85	-0.1
3,856,387	-		DZA65_RS17910	0.86	-1.2
3,856,410	+		DZA65_RS17910	0.87	-0.2
3,856,410	+		DZA65_RS17910	0.87	+0.8
3,856,410	+		DZA65_RS17910	0.87	-0.1
3,856,410	+		DZA65_RS17910	0.87	-0.4
3,856,410	+				+0.8
3,856,411	-		DZA65_RS17910	0.87	+0.4
3,856,411	-		DZA65_RS17910	0.87	+0.7
3,856,411	-		DZA65_RS17910	0.87	+0.5
3,856,411	-		DZA65_RS17910	0.87	+1.8
3,856,411	-		DZA65_RS17910	0.87	+1.3
3,856,411	-		DZA65_RS17910	0.87	+0.4
3,856,411	-		DZA65_RS17910	0.87	-0.6
3,856,458	+				-0.3
3,856,458	+				+0.6
3,856,459	-				-0.8
3,856,459	-				-0.2
3,856,459	-				+0.0
3,856,459	-				+1.4
3,856,608	+				-1.2
3,856,626	+				-0.5
3,856,651	-				+0.5
3,856,651	-				-0.6
3,856,651	-				+0.8
3,856,651	-				+2.2
3,856,651	-				-0.6
3,856,691	+				-1.4
3,856,692	-				-0.8
3,856,767	+				+2.6
3,856,767	+				+0.8
3,856,767	+				-0.8
3,856,768	-				+0.2
3,856,768	-				-0.8
3,856,768	-				-2.0
3,856,920	+		DZA65_RS17915	0.19	-0.4
3,856,920	+		DZA65_RS17915	0.19	+0.1
3,856,920	+		DZA65_RS17915	0.19	+0.6
3,856,921	-		DZA65_RS17915	0.19	-1.2
3,856,921	-		DZA65_RS17915	0.19	+0.3
3,856,921	-		DZA65_RS17915	0.19	-1.6
3,856,921	-		DZA65_RS17915	0.19	+1.7
3,856,926	+		DZA65_RS17915	0.19	+0.8
3,856,926	+		DZA65_RS17915	0.19	-1.8
3,856,927	-		DZA65_RS17915	0.19	+0.9
3,856,938	+		DZA65_RS17915	0.20	+0.8
3,856,938	+		DZA65_RS17915	0.20	+0.2
3,856,938	+		DZA65_RS17915	0.20	-2.0
3,856,938	+		DZA65_RS17915	0.20	+0.1
3,856,938	+		DZA65_RS17915	0.20	-1.5
3,856,938	+				-0.2
3,856,938	+		DZA65_RS17915	0.20	+0.1
3,856,939	-		DZA65_RS17915	0.20	-0.9
3,856,939	-		DZA65_RS17915	0.20	+1.5
3,856,939	-		DZA65_RS17915	0.20	-0.2
3,856,939	-		DZA65_RS17915	0.20	-1.4
3,856,939	-		DZA65_RS17915	0.20	+0.1
3,856,939	-		DZA65_RS17915	0.20	+0.8
3,856,941	-		DZA65_RS17915	0.21	+1.4
3,856,941	-		DZA65_RS17915	0.21	-0.2
3,856,941	-		DZA65_RS17915	0.21	+0.4
3,857,100	+		DZA65_RS17915	0.35	-0.6
3,857,100	+		DZA65_RS17915	0.35	-0.8
3,857,100	+		DZA65_RS17915	0.35	-0.9
3,857,100	+				+0.8
3,857,100	+		DZA65_RS17915	0.35	-0.1
3,857,101	-		DZA65_RS17915	0.35	+0.1
3,857,101	-		DZA65_RS17915	0.35	-2.8
3,857,101	-		DZA65_RS17915	0.35	-1.5
3,857,101	-		DZA65_RS17915	0.35	-1.4
3,857,101	-		DZA65_RS17915	0.35	+0.5
3,857,122	-		DZA65_RS17915	0.37	-2.0
3,857,289	-		DZA65_RS17915	0.52	-0.8
3,857,418	-		DZA65_RS17915	0.64	-0.3
3,857,418	-		DZA65_RS17915	0.64	-1.2
3,857,418	-		DZA65_RS17915	0.64	-0.8
3,857,418	-		DZA65_RS17915	0.64	-1.1