Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17495

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,768,182	+		DZA65_RS17490	0.17	-1.2
3,768,272	+		DZA65_RS17490	0.26	+0.0
3,768,384	+		DZA65_RS17490	0.38	-2.2
3,768,385	-		DZA65_RS17490	0.38	-1.2
3,768,385	-		DZA65_RS17490	0.38	+0.3
3,768,410	+		DZA65_RS17490	0.41	-0.9
3,768,470	+		DZA65_RS17490	0.47	-0.7
3,768,470	+		DZA65_RS17490	0.47	+0.3
3,768,471	-		DZA65_RS17490	0.47	-0.5
3,768,471	-		DZA65_RS17490	0.47	-2.4
3,768,563	+		DZA65_RS17490	0.57	+2.0
3,768,563	+		DZA65_RS17490	0.57	-1.2
3,768,564	-		DZA65_RS17490	0.57	+0.4
3,768,569	+		DZA65_RS17490	0.57	-3.0
3,768,616	+		DZA65_RS17490	0.62	-1.8
3,768,629	+		DZA65_RS17490	0.64	-2.4
3,768,629	+				-0.2
3,768,657	-		DZA65_RS17490	0.66	-1.2
3,768,686	+		DZA65_RS17490	0.69	-0.6
3,768,687	-		DZA65_RS17490	0.70	+0.8
3,768,710	+		DZA65_RS17490	0.72	+0.2
3,768,711	-		DZA65_RS17490	0.72	+1.7
3,768,714	-		DZA65_RS17490	0.72	-0.6
3,768,714	-		DZA65_RS17490	0.72	-1.6
3,768,727	+		DZA65_RS17490	0.74	-0.8
3,768,728	-		DZA65_RS17490	0.74	-1.8
3,768,743	+		DZA65_RS17490	0.75	+0.0
3,768,758	+		DZA65_RS17490	0.77	+0.5
3,768,759	-		DZA65_RS17490	0.77	-0.8
3,768,972	+				-0.1
3,769,209	-		DZA65_RS17495	0.11	+0.9
3,769,227	+		DZA65_RS17495	0.12	-0.2
3,769,227	+		DZA65_RS17495	0.12	-1.6
3,769,227	+		DZA65_RS17495	0.12	-0.0
3,769,228	-		DZA65_RS17495	0.12	+0.5
3,769,251	+		DZA65_RS17495	0.14	-0.1
3,769,320	+		DZA65_RS17495	0.18	+0.2
3,769,320	+		DZA65_RS17495	0.18	+0.3
3,769,320	+		DZA65_RS17495	0.18	-0.2
3,769,320	+		DZA65_RS17495	0.18	-1.2
3,769,321	-		DZA65_RS17495	0.18	+0.2
3,769,400	-		DZA65_RS17495	0.23	-1.1
3,769,552	+		DZA65_RS17495	0.33	-1.8
3,769,552	+		DZA65_RS17495	0.33	-1.2
3,769,552	+		DZA65_RS17495	0.33	+0.4
3,769,552	+		DZA65_RS17495	0.33	+0.1
3,769,553	-		DZA65_RS17495	0.34	-1.1
3,769,553	-		DZA65_RS17495	0.34	-1.4
3,769,553	-		DZA65_RS17495	0.34	+1.7
3,769,553	-		DZA65_RS17495	0.34	-0.6
3,769,553	-		DZA65_RS17495	0.34	+0.3
3,769,608	-		DZA65_RS17495	0.37	+0.3
3,769,677	+		DZA65_RS17495	0.42	+0.8
3,769,677	+		DZA65_RS17495	0.42	+0.0
3,769,694	+		DZA65_RS17495	0.43	+0.1
3,769,694	+		DZA65_RS17495	0.43	-0.1
3,769,695	-		DZA65_RS17495	0.43	-0.6
3,769,695	-		DZA65_RS17495	0.43	-1.4
3,769,695	-		DZA65_RS17495	0.43	-0.2
3,769,697	+		DZA65_RS17495	0.43	-0.8
3,769,697	+		DZA65_RS17495	0.43	-0.4
3,769,697	+		DZA65_RS17495	0.43	-1.6
3,769,697	+		DZA65_RS17495	0.43	+0.2
3,769,697	+		DZA65_RS17495	0.43	+0.8
3,769,697	+		DZA65_RS17495	0.43	-1.2
3,769,698	-		DZA65_RS17495	0.43	-1.6
3,769,698	-		DZA65_RS17495	0.43	-0.1
3,769,756	+		DZA65_RS17495	0.47	-0.8
3,769,756	+				+0.3
3,769,756	+		DZA65_RS17495	0.47	+0.2
3,769,756	+		DZA65_RS17495	0.47	-0.1
3,769,757	-		DZA65_RS17495	0.47	-0.7
3,769,757	-		DZA65_RS17495	0.47	-1.2
3,769,757	-		DZA65_RS17495	0.47	+0.8
3,769,878	-		DZA65_RS17495	0.55	+0.1
3,769,936	+		DZA65_RS17495	0.59	+0.2
3,769,936	+		DZA65_RS17495	0.59	+0.5
3,769,936	+		DZA65_RS17495	0.59	+0.2
3,769,936	+		DZA65_RS17495	0.59	+1.2
3,769,937	-		DZA65_RS17495	0.59	+0.8
3,769,937	-		DZA65_RS17495	0.59	-0.6
3,769,937	-		DZA65_RS17495	0.59	-0.3
3,769,937	-		DZA65_RS17495	0.59	-0.9
3,769,937	-		DZA65_RS17495	0.59	-1.1
3,770,126	+		DZA65_RS17495	0.72	-0.1
3,770,127	-		DZA65_RS17495	0.72	+0.0
3,770,553	+				-0.5
3,770,628	-				+0.9
3,770,628	-				-0.3
3,770,655	-				+0.3
3,770,681	+		DZA65_RS17500	0.11	-0.7
3,770,681	+		DZA65_RS17500	0.11	+0.7
3,770,682	-		DZA65_RS17500	0.11	+2.3
3,770,682	-		DZA65_RS17500	0.11	+1.5
3,770,682	-		DZA65_RS17500	0.11	+0.2
3,770,721	-		DZA65_RS17500	0.15	-0.8
3,770,754	+		DZA65_RS17500	0.18	-0.1
3,770,848	-		DZA65_RS17500	0.27	+0.4
3,770,848	-		DZA65_RS17500	0.27	+2.4
3,770,880	+		DZA65_RS17500	0.30	-0.5
3,770,893	+		DZA65_RS17500	0.31	+0.7
3,770,958	+		DZA65_RS17500	0.37	+0.3
3,771,008	+		DZA65_RS17500	0.42	-0.8
3,771,008	+		DZA65_RS17500	0.42	+1.1
3,771,009	-		DZA65_RS17500	0.42	+1.2
3,771,009	-		DZA65_RS17500	0.42	+1.0
3,771,009	-		DZA65_RS17500	0.42	+0.7
3,771,027	+		DZA65_RS17500	0.44	-0.8
3,771,028	-				+2.2
3,771,109	+		DZA65_RS17500	0.52	+0.4
3,771,109	+		DZA65_RS17500	0.52	+0.6
3,771,109	+		DZA65_RS17500	0.52	+0.9
3,771,109	+		DZA65_RS17500	0.52	-1.3
3,771,109	+		DZA65_RS17500	0.52	+1.2
3,771,210	+		DZA65_RS17500	0.62	+0.4
3,771,211	-		DZA65_RS17500	0.62	-1.2
3,771,211	-		DZA65_RS17500	0.62	-0.5
3,771,268	+		DZA65_RS17500	0.67	-0.6
3,771,268	+		DZA65_RS17500	0.67	-0.3
3,771,268	+		DZA65_RS17500	0.67	+0.7
3,771,268	+		DZA65_RS17500	0.67	-1.6
3,771,268	+		DZA65_RS17500	0.67	+1.3
3,771,268	+		DZA65_RS17500	0.67	+0.2
3,771,269	-		DZA65_RS17500	0.67	-1.3
3,771,269	-		DZA65_RS17500	0.67	-1.7
3,771,269	-		DZA65_RS17500	0.67	+0.9
3,771,269	-		DZA65_RS17500	0.67	-0.3
3,771,269	-		DZA65_RS17500	0.67	-0.1
3,771,269	-		DZA65_RS17500	0.67	-2.2
3,771,269	-		DZA65_RS17500	0.67	+0.0
3,771,269	-		DZA65_RS17500	0.67	-0.1
3,771,269	-		DZA65_RS17500	0.67	-0.8
3,771,269	-		DZA65_RS17500	0.67	-0.3
3,771,269	-		DZA65_RS17500	0.67	+0.7
3,771,269	-		DZA65_RS17500	0.67	-0.5
3,771,269	-		DZA65_RS17500	0.67	-0.6
3,771,420	+		DZA65_RS17500	0.82	-0.3
3,771,420	+		DZA65_RS17500	0.82	-2.1
3,771,421	-		DZA65_RS17500	0.82	+0.2