Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10150

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,146,442	+				-1.6
2,146,450	+				-0.1
2,146,450	+				-1.7
2,146,483	+				-0.4
2,146,483	+				+1.1
2,146,483	+				+0.3
2,146,483	+				+0.1
2,146,483	+				-0.3
2,146,483	+				+1.0
2,146,488	+				+0.6
2,146,502	+				+1.9
2,146,510	+				-1.2
2,146,510	+				-1.1
2,146,511	-				+0.5
2,146,511	-				-0.7
2,146,516	+				-1.7
2,146,516	+				-1.0
2,146,524	+				+0.6
2,146,578	+				-0.3
2,146,578	+				+0.3
2,146,578	+				-1.3
2,146,578	+				-1.6
2,146,578	+				-0.7
2,146,578	+				-0.4
2,146,578	+				+0.3
2,146,578	+				+0.3
2,146,578	+				+0.7
2,146,578	+				-0.2
2,146,578	+				-1.8
2,146,578	+				-1.0
2,146,579	-				-0.6
2,146,579	-				+0.1
2,146,582	+				+0.9
2,146,602	+				-0.2
2,146,602	+				-0.1
2,146,603	-				+0.1
2,146,612	+				+1.5
2,146,612	+				+2.5
2,146,612	+				+0.3
2,146,612	+				-0.3
2,146,612	+				+0.3
2,146,612	+				+0.3
2,146,613	-				-0.0
2,146,613	-				-0.0
2,146,613	-				+0.7
2,146,613	-				+0.3
2,146,613	-				+0.5
2,146,768	+				-2.8
2,146,769	-				-0.5
2,146,876	-				-0.3
2,146,876	-				+0.6
2,146,876	-				-0.3
2,146,954	+				-1.1
2,146,954	+				-0.7
2,146,954	+				-0.0
2,146,954	+				-1.9
2,146,954	+				-0.9
2,146,954	+				-0.7
2,146,955	-				-0.3
2,146,980	+				+0.9
2,147,030	-		DZA65_RS10150	0.12	+0.9
2,147,071	+		DZA65_RS10150	0.15	+0.6
2,147,113	+		DZA65_RS10150	0.18	+0.1
2,147,113	+		DZA65_RS10150	0.18	-0.4
2,147,113	+		DZA65_RS10150	0.18	+0.7
2,147,113	+		DZA65_RS10150	0.18	-0.3
2,147,113	+		DZA65_RS10150	0.18	-1.0
2,147,113	+		DZA65_RS10150	0.18	-2.2
2,147,113	+		DZA65_RS10150	0.18	-0.2
2,147,114	-		DZA65_RS10150	0.18	+0.1
2,147,115	+		DZA65_RS10150	0.19	-0.7
2,147,115	+		DZA65_RS10150	0.19	-0.0
2,147,115	+		DZA65_RS10150	0.19	-1.6
2,147,115	+		DZA65_RS10150	0.19	-0.5
2,147,115	+		DZA65_RS10150	0.19	+0.0
2,147,115	+		DZA65_RS10150	0.19	-1.3
2,147,115	+		DZA65_RS10150	0.19	-0.1
2,147,115	+		DZA65_RS10150	0.19	-1.3
2,147,115	+		DZA65_RS10150	0.19	+0.5
2,147,115	+		DZA65_RS10150	0.19	-0.4
2,147,115	+		DZA65_RS10150	0.19	-0.1
2,147,116	-		DZA65_RS10150	0.19	+0.3
2,147,116	-		DZA65_RS10150	0.19	+1.0
2,147,116	-		DZA65_RS10150	0.19	+0.3
2,147,116	-		DZA65_RS10150	0.19	+1.3
2,147,116	-		DZA65_RS10150	0.19	+1.0
2,147,116	-		DZA65_RS10150	0.19	+0.1
2,147,119	+		DZA65_RS10150	0.19	+0.3
2,147,119	+		DZA65_RS10150	0.19	-1.1
2,147,119	+		DZA65_RS10150	0.19	-2.1
2,147,120	-		DZA65_RS10150	0.19	-0.4
2,147,120	-		DZA65_RS10150	0.19	-0.3
2,147,120	-		DZA65_RS10150	0.19	-0.9
2,147,137	-		DZA65_RS10150	0.20	-0.8
2,147,183	-		DZA65_RS10150	0.24	-0.5
2,147,183	-		DZA65_RS10150	0.24	-0.4
2,147,225	-		DZA65_RS10150	0.27	-0.7
2,147,331	+		DZA65_RS10150	0.34	-0.3
2,147,332	-		DZA65_RS10150	0.34	+0.3
2,147,332	-		DZA65_RS10150	0.34	-0.4
2,147,335	-		DZA65_RS10150	0.35	+0.4
2,147,392	+		DZA65_RS10150	0.39	+0.2
2,147,392	+		DZA65_RS10150	0.39	-1.3
2,147,392	+		DZA65_RS10150	0.39	-1.7
2,147,393	-		DZA65_RS10150	0.39	-0.3
2,147,454	+		DZA65_RS10150	0.43	-0.7
2,147,577	+		DZA65_RS10150	0.52	-2.3
2,147,578	-		DZA65_RS10150	0.52	+0.1
2,147,578	-		DZA65_RS10150	0.52	-2.3
2,147,626	+		DZA65_RS10150	0.56	-3.1
2,147,626	+		DZA65_RS10150	0.56	+0.0
2,147,627	-		DZA65_RS10150	0.56	+0.0
2,147,627	-		DZA65_RS10150	0.56	+1.1
2,147,641	+		DZA65_RS10150	0.57	+0.1
2,147,641	+		DZA65_RS10150	0.57	-1.2
2,147,641	+		DZA65_RS10150	0.57	+0.3
2,147,642	-		DZA65_RS10150	0.57	+1.6
2,147,642	-		DZA65_RS10150	0.57	-1.3
2,147,642	-		DZA65_RS10150	0.57	-1.3
2,147,653	-		DZA65_RS10150	0.58	-0.8
2,147,653	-		DZA65_RS10150	0.58	+0.3
2,147,701	+		DZA65_RS10150	0.61	-0.3
2,147,701	+		DZA65_RS10150	0.61	+1.0
2,147,701	+		DZA65_RS10150	0.61	-0.7
2,147,702	-		DZA65_RS10150	0.61	-1.7
2,147,702	-		DZA65_RS10150	0.61	+0.3
2,147,702	-		DZA65_RS10150	0.61	-0.7
2,147,702	-		DZA65_RS10150	0.61	+0.6
2,147,702	-		DZA65_RS10150	0.61	+1.0
2,147,803	+		DZA65_RS10150	0.69	-0.6
2,147,803	+		DZA65_RS10150	0.69	+0.7
2,147,803	+		DZA65_RS10150	0.69	-1.7
2,147,803	+		DZA65_RS10150	0.69	-1.7
2,147,807	+		DZA65_RS10150	0.69	-1.1
2,147,807	+		DZA65_RS10150	0.69	-0.7
2,147,807	+		DZA65_RS10150	0.69	+2.5
2,147,807	+		DZA65_RS10150	0.69	-0.4
2,147,808	-		DZA65_RS10150	0.69	+0.1
2,147,808	-		DZA65_RS10150	0.69	-1.3
2,147,848	+		DZA65_RS10150	0.72	-0.3
2,147,849	-		DZA65_RS10150	0.72	+0.3
2,147,852	+		DZA65_RS10150	0.72	-0.2
2,147,852	+		DZA65_RS10150	0.72	+0.2
2,147,852	+		DZA65_RS10150	0.72	+0.6
2,147,852	+		DZA65_RS10150	0.72	+1.3
2,147,852	+		DZA65_RS10150	0.72	+0.1
2,147,852	+		DZA65_RS10150	0.72	-0.7
2,147,852	+		DZA65_RS10150	0.72	-0.5
2,147,852	+		DZA65_RS10150	0.72	+0.6
2,147,852	+		DZA65_RS10150	0.72	+0.7
2,147,852	+		DZA65_RS10150	0.72	-2.0
2,147,853	-		DZA65_RS10150	0.73	-1.4
2,147,853	-		DZA65_RS10150	0.73	+0.5
2,147,853	-		DZA65_RS10150	0.73	-2.3
2,147,853	-		DZA65_RS10150	0.73	-0.0
2,147,853	-		DZA65_RS10150	0.73	-0.1
2,147,853	-				+0.9
2,147,853	-				-1.7
2,147,853	-		DZA65_RS10150	0.73	+0.1
2,147,918	+		DZA65_RS10150	0.77	+1.3
2,147,918	+		DZA65_RS10150	0.77	-2.3
2,147,918	+		DZA65_RS10150	0.77	-0.5
2,147,952	+		DZA65_RS10150	0.80	-1.0
2,147,952	+		DZA65_RS10150	0.80	-0.9
2,148,010	+		DZA65_RS10150	0.84	-0.4
2,148,010	+		DZA65_RS10150	0.84	-0.4
2,148,010	+		DZA65_RS10150	0.84	-0.6
2,148,010	+		DZA65_RS10150	0.84	-1.3
2,148,011	-		DZA65_RS10150	0.84	-1.7
2,148,011	-		DZA65_RS10150	0.84	+0.4
2,148,011	-		DZA65_RS10150	0.84	-0.4
2,148,011	-		DZA65_RS10150	0.84	-0.0
2,148,011	-		DZA65_RS10150	0.84	-0.9
2,148,011	-		DZA65_RS10150	0.84	+0.1
2,148,011	-		DZA65_RS10150	0.84	+0.3
2,148,011	-		DZA65_RS10150	0.84	+0.3
2,148,011	-		DZA65_RS10150	0.84	-1.8
2,148,011	-		DZA65_RS10150	0.84	+1.7
2,148,011	-		DZA65_RS10150	0.84	-2.1
2,148,031	-		DZA65_RS10150	0.86	+0.3
2,148,055	+		DZA65_RS10150	0.87	-0.1
2,148,056	-		DZA65_RS10150	0.87	-2.0
2,148,056	-		DZA65_RS10150	0.87	-0.2
2,148,117	+				-0.9
2,148,163	+				+0.3
2,148,164	-				-0.0
2,148,226	+				+1.2
2,148,226	+				-0.0
2,148,226	+				-0.1
2,148,227	-				-0.1
2,148,227	-				+0.6
2,148,395	+				-1.0
2,148,419	+				+0.2
2,148,419	+				-0.1
2,148,419	+				-0.1
2,148,420	-				+0.3
2,148,420	-				-0.9
2,148,529	+		DZA65_RS10155	0.15	-0.3
2,148,529	+		DZA65_RS10155	0.15	-0.4
2,148,529	+		DZA65_RS10155	0.15	-0.7
2,148,530	-		DZA65_RS10155	0.15	+0.3
2,148,530	-		DZA65_RS10155	0.15	-0.4
2,148,530	-		DZA65_RS10155	0.15	+0.3
2,148,530	-		DZA65_RS10155	0.15	-0.4
2,148,594	+		DZA65_RS10155	0.19	+0.5
2,148,644	+		DZA65_RS10155	0.23	+0.1
2,148,644	+		DZA65_RS10155	0.23	-0.7
2,148,644	+		DZA65_RS10155	0.23	-0.1
2,148,644	+		DZA65_RS10155	0.23	-0.1
2,148,644	+		DZA65_RS10155	0.23	-0.4
2,148,644	+		DZA65_RS10155	0.23	-1.1
2,148,645	-		DZA65_RS10155	0.23	-1.7
2,148,645	-		DZA65_RS10155	0.23	+1.1
2,148,645	-		DZA65_RS10155	0.23	-2.1
2,148,645	-		DZA65_RS10155	0.23	+2.5
2,148,802	+		DZA65_RS10155	0.34	-1.3
2,148,834	+		DZA65_RS10155	0.36	+0.7
2,148,841	-		DZA65_RS10155	0.37	-0.4
2,148,855	+		DZA65_RS10155	0.38	-0.0
2,148,899	+		DZA65_RS10155	0.41	-0.7
2,148,900	-		DZA65_RS10155	0.41	-0.4
2,149,009	+		DZA65_RS10155	0.48	+1.0
2,149,010	-		DZA65_RS10155	0.48	-0.1
2,149,013	-		DZA65_RS10155	0.49	+0.5
2,149,013	-		DZA65_RS10155	0.49	-0.5
2,149,023	+		DZA65_RS10155	0.49	-1.0
2,149,023	+		DZA65_RS10155	0.49	+1.0
2,149,023	+		DZA65_RS10155	0.49	+1.1
2,149,023	+		DZA65_RS10155	0.49	+0.0
2,149,024	-		DZA65_RS10155	0.49	-0.9
2,149,027	-		DZA65_RS10155	0.50	+0.6
2,149,058	+		DZA65_RS10155	0.52	-0.4
2,149,058	+		DZA65_RS10155	0.52	+0.3
2,149,058	+		DZA65_RS10155	0.52	-0.9
2,149,058	+		DZA65_RS10155	0.52	-0.5
2,149,058	+		DZA65_RS10155	0.52	-1.1
2,149,058	+		DZA65_RS10155	0.52	+1.0
2,149,059	-		DZA65_RS10155	0.52	+0.3
2,149,059	-		DZA65_RS10155	0.52	+0.1
2,149,059	-		DZA65_RS10155	0.52	-2.5
2,149,059	-		DZA65_RS10155	0.52	-0.7
2,149,059	-		DZA65_RS10155	0.52	-0.1
2,149,059	-		DZA65_RS10155	0.52	+0.7
2,149,059	-		DZA65_RS10155	0.52	+0.3
2,149,081	+		DZA65_RS10155	0.53	-1.3
2,149,081	+		DZA65_RS10155	0.53	-1.3
2,149,082	-		DZA65_RS10155	0.54	+0.3
2,149,083	+		DZA65_RS10155	0.54	-1.2
2,149,084	-		DZA65_RS10155	0.54	-2.1
2,149,124	+		DZA65_RS10155	0.56	+1.5
2,149,125	-		DZA65_RS10155	0.57	-1.4
2,149,130	+		DZA65_RS10155	0.57	-1.3
2,149,130	+		DZA65_RS10155	0.57	+1.3
2,149,130	+		DZA65_RS10155	0.57	-0.5
2,149,158	+		DZA65_RS10155	0.59	+0.3
2,149,159	-		DZA65_RS10155	0.59	+1.2
2,149,159	-		DZA65_RS10155	0.59	-0.1
2,149,187	+		DZA65_RS10155	0.61	+3.4
2,149,187	+		DZA65_RS10155	0.61	-0.5
2,149,187	+		DZA65_RS10155	0.61	-2.0
2,149,187	+		DZA65_RS10155	0.61	-2.7
2,149,187	+		DZA65_RS10155	0.61	+1.9
2,149,188	-		DZA65_RS10155	0.61	-0.2
2,149,188	-		DZA65_RS10155	0.61	-1.2
2,149,188	-		DZA65_RS10155	0.61	-0.2
2,149,188	-		DZA65_RS10155	0.61	-1.3