Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08370

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,764,107	+		DZA65_RS08365	0.17	+1.7
1,764,108	-				+0.4
1,764,140	+		DZA65_RS08365	0.21	-1.1
1,764,140	+		DZA65_RS08365	0.21	+0.2
1,764,140	+		DZA65_RS08365	0.21	+2.3
1,764,140	+		DZA65_RS08365	0.21	-1.0
1,764,140	+		DZA65_RS08365	0.21	+1.5
1,764,140	+		DZA65_RS08365	0.21	-1.9
1,764,141	-		DZA65_RS08365	0.21	-0.2
1,764,141	-		DZA65_RS08365	0.21	-0.1
1,764,141	-		DZA65_RS08365	0.21	+0.2
1,764,141	-		DZA65_RS08365	0.21	-1.9
1,764,141	-		DZA65_RS08365	0.21	-0.1
1,764,141	-		DZA65_RS08365	0.21	+0.7
1,764,206	+		DZA65_RS08365	0.30	+0.6
1,764,206	+		DZA65_RS08365	0.30	-0.6
1,764,206	+		DZA65_RS08365	0.30	-0.3
1,764,207	-		DZA65_RS08365	0.30	+0.9
1,764,207	-		DZA65_RS08365	0.30	+0.4
1,764,207	-		DZA65_RS08365	0.30	-0.4
1,764,207	-		DZA65_RS08365	0.30	-0.6
1,764,207	-		DZA65_RS08365	0.30	+0.4
1,764,285	-		DZA65_RS08365	0.40	-0.6
1,764,285	-		DZA65_RS08365	0.40	+0.4
1,764,309	+		DZA65_RS08365	0.43	-0.8
1,764,309	+		DZA65_RS08365	0.43	-0.9
1,764,309	+		DZA65_RS08365	0.43	+2.4
1,764,309	+		DZA65_RS08365	0.43	+0.4
1,764,309	+		DZA65_RS08365	0.43	-1.0
1,764,309	+		DZA65_RS08365	0.43	-1.3
1,764,309	+		DZA65_RS08365	0.43	-2.1
1,764,309	+		DZA65_RS08365	0.43	-0.3
1,764,309	+		DZA65_RS08365	0.43	-0.6
1,764,309	+		DZA65_RS08365	0.43	-0.4
1,764,310	-		DZA65_RS08365	0.44	+0.6
1,764,310	-		DZA65_RS08365	0.44	-0.7
1,764,310	-		DZA65_RS08365	0.44	+0.0
1,764,310	-		DZA65_RS08365	0.44	+0.0
1,764,437	+		DZA65_RS08365	0.60	-2.7
1,764,437	+		DZA65_RS08365	0.60	-0.4
1,764,438	-		DZA65_RS08365	0.60	-0.2
1,764,438	-		DZA65_RS08365	0.60	-0.0
1,764,545	+		DZA65_RS08365	0.74	-0.9
1,764,545	+		DZA65_RS08365	0.74	+0.4
1,764,545	+		DZA65_RS08365	0.74	-1.1
1,764,545	+		DZA65_RS08365	0.74	-0.6
1,764,545	+		DZA65_RS08365	0.74	+0.4
1,764,545	+		DZA65_RS08365	0.74	-0.4
1,764,546	-		DZA65_RS08365	0.74	-0.1
1,764,546	-		DZA65_RS08365	0.74	-1.4
1,764,546	-		DZA65_RS08365	0.74	+0.7
1,764,546	-		DZA65_RS08365	0.74	-0.8
1,764,546	-		DZA65_RS08365	0.74	-1.0
1,764,546	-		DZA65_RS08365	0.74	+1.2
1,764,546	-		DZA65_RS08365	0.74	-2.6
1,764,673	+				-1.0
1,764,673	+				-1.9
1,764,673	+				+0.7
1,764,673	+				+0.1
1,764,673	+				+2.0
1,764,673	+				+1.6
1,764,674	-				+0.2
1,764,674	-				+1.6
1,764,674	-				-0.6
1,764,674	-				+0.4
1,764,674	-				+0.7
1,764,674	-				-0.4
1,764,674	-				-0.9
1,764,674	-				+0.6
1,764,674	-				+0.2
1,764,674	-				-0.5
1,764,677	+				-0.3
1,764,677	+				-0.1
1,764,677	+				+0.6
1,764,677	+				-0.7
1,764,677	+				-3.5
1,764,677	+				-0.6
1,764,677	+				+0.2
1,764,678	-				-0.0
1,764,678	-				-2.6
1,764,678	-				+0.6
1,764,705	+				-2.4
1,764,705	+				+0.9
1,764,725	+				-0.6
1,764,725	+				+0.2
1,764,726	-				+1.2
1,764,726	-				-1.1
1,764,726	-				-1.9
1,764,726	-				-0.1
1,764,726	-				+0.3
1,764,726	-				-1.0
1,764,736	+				+0.5
1,764,736	+				+0.1
1,764,737	-				+0.3
1,764,804	+				+0.9
1,764,804	+				+0.4
1,764,805	-				-0.0
1,764,805	-				+0.2
1,764,873	+				+0.0
1,764,873	+				+0.6
1,764,873	+				-1.0
1,764,873	+				-0.1
1,764,873	+				-0.2
1,764,874	-				+0.6
1,764,874	-				-0.2
1,764,874	-				-0.9
1,764,879	+				+0.6
1,764,889	+				-0.6
1,764,895	+				+1.1
1,764,895	+				-0.0
1,764,911	+				-0.0
1,764,912	-				+0.1
1,764,920	+				+0.0
1,764,920	+				+1.2
1,764,920	+				-0.2
1,764,920	+				-0.6
1,764,920	+				-1.0
1,764,920	+				-0.6
1,764,920	+				-0.6
1,764,920	+				+1.0
1,764,920	+				-0.6
1,764,921	-				-0.1
1,764,921	-				-0.2
1,764,921	-				-0.0
1,764,921	-				-0.7
1,764,921	-				-0.3
1,764,921	-				+1.6
1,764,933	-				-0.4
1,764,933	-				+0.4
1,764,952	+				+1.3
1,764,963	+				+0.1
1,764,963	+				-0.2
1,764,963	+				+0.3
1,764,964	-				+0.2
1,765,057	+				-0.6
1,765,057	+				+2.2
1,765,111	-		DZA65_RS08370	0.11	+0.0
1,765,174	+		DZA65_RS08370	0.18	-0.6
1,765,280	-		DZA65_RS08370	0.30	-0.4
1,765,280	-		DZA65_RS08370	0.30	+1.4
1,765,531	+		DZA65_RS08370	0.58	-0.7
1,765,531	+		DZA65_RS08370	0.58	-2.1
1,765,532	-		DZA65_RS08370	0.58	+0.4
1,765,532	-		DZA65_RS08370	0.58	+0.8
1,765,686	+		DZA65_RS08370	0.75	-1.1
1,765,687	-		DZA65_RS08370	0.75	+0.1
1,765,714	+		DZA65_RS08370	0.78	-0.7
1,765,714	+		DZA65_RS08370	0.78	+0.0
1,765,715	-		DZA65_RS08370	0.78	-1.4
1,765,715	-		DZA65_RS08370	0.78	-2.1
1,765,715	-		DZA65_RS08370	0.78	+0.0
1,765,715	-		DZA65_RS08370	0.78	-1.4
1,765,771	+		DZA65_RS08370	0.85	+0.8
1,765,823	-				+0.0
1,765,871	-				+0.4
1,765,871	-				+0.7
1,765,892	+				-0.0
1,765,892	+				-0.3
1,765,892	+				+0.9
1,765,892	+				+0.4
1,765,892	+				+0.8
1,765,892	+				+0.8
1,765,892	+				-0.0
1,765,892	+				-1.9
1,765,893	-				-0.7
1,765,893	-				+0.1
1,765,909	+				+1.2
1,765,909	+				+0.3
1,765,909	+				-1.4
1,765,909	+				+0.7
1,765,909	+				-0.7
1,765,910	-				-1.6
1,765,926	-				+0.3
1,765,926	-				-1.0
1,765,932	+				+0.9
1,765,967	+				+0.6
1,765,983	+				+0.1
1,765,983	+				+0.8
1,765,983	+				+1.3
1,765,983	+				+0.1
1,765,983	+				+0.7
1,765,983	+				+0.1
1,765,983	+				+0.2
1,765,983	+				-1.6
1,765,984	-				-0.7
1,765,984	-				+2.0
1,765,984	-				-0.9
1,765,984	-				+0.8
1,765,984	-				-0.4
1,765,984	-				+0.4
1,765,984	-				+1.2
1,765,984	-				-1.1
1,765,984	-				-0.9
1,766,002	+				-0.0
1,766,003	-				+1.6
1,766,003	-				+1.3
1,766,014	+				+0.1
1,766,015	-				-0.1
1,766,034	+				+0.2
1,766,034	+				+0.4
1,766,034	+				-1.7
1,766,034	+				+0.1
1,766,062	+				+0.2
1,766,062	+				-0.3
1,766,063	-				+0.3
1,766,063	-				-0.6
1,766,070	+				+0.2
1,766,071	-				-2.2
1,766,186	+				-0.6
1,766,186	+				+0.2
1,766,186	+				-0.6
1,766,186	+				-1.8
1,766,186	+				-1.1
1,766,186	+				-2.1
1,766,187	-				+0.9
1,766,187	-				+1.1
1,766,187	-				+0.6
1,766,187	-				-1.4
1,766,263	+		DZA65_RS08375	0.12	-2.3
1,766,263	+		DZA65_RS08375	0.12	+1.4
1,766,263	+		DZA65_RS08375	0.12	-1.7
1,766,264	-		DZA65_RS08375	0.12	-0.4
1,766,264	-		DZA65_RS08375	0.12	+0.3
1,766,264	-		DZA65_RS08375	0.12	-0.6
1,766,264	-		DZA65_RS08375	0.12	+0.9
1,766,317	+		DZA65_RS08375	0.16	-1.1
1,766,317	+		DZA65_RS08375	0.16	+1.4
1,766,317	+		DZA65_RS08375	0.16	+1.2
1,766,318	-		DZA65_RS08375	0.16	+1.2
1,766,318	-		DZA65_RS08375	0.16	-0.6
1,766,322	+		DZA65_RS08375	0.16	+0.4
1,766,323	-		DZA65_RS08375	0.16	+0.6
1,766,435	+		DZA65_RS08375	0.23	-0.2
1,766,435	+		DZA65_RS08375	0.23	-2.1
1,766,435	+		DZA65_RS08375	0.23	+1.0
1,766,435	+		DZA65_RS08375	0.23	+0.1
1,766,436	-		DZA65_RS08375	0.23	-1.9
1,766,590	+		DZA65_RS08375	0.33	-0.3
1,766,630	+		DZA65_RS08375	0.36	+0.7
1,766,630	+		DZA65_RS08375	0.36	+0.4
1,766,630	+		DZA65_RS08375	0.36	+2.2
1,766,630	+		DZA65_RS08375	0.36	-0.7
1,766,630	+		DZA65_RS08375	0.36	+0.2
1,766,630	+		DZA65_RS08375	0.36	+1.4
1,766,630	+		DZA65_RS08375	0.36	+1.1
1,766,630	+		DZA65_RS08375	0.36	+0.7
1,766,630	+		DZA65_RS08375	0.36	+1.1
1,766,630	+		DZA65_RS08375	0.36	-0.6
1,766,630	+		DZA65_RS08375	0.36	+0.6
1,766,630	+		DZA65_RS08375	0.36	-1.6
1,766,630	+		DZA65_RS08375	0.36	-2.1
1,766,631	-		DZA65_RS08375	0.36	+1.1
1,766,631	-		DZA65_RS08375	0.36	+1.9
1,766,631	-		DZA65_RS08375	0.36	-0.7
1,766,631	-		DZA65_RS08375	0.36	-0.6
1,766,633	-		DZA65_RS08375	0.36	-0.4
1,766,672	+		DZA65_RS08375	0.39	-0.3
1,766,673	-		DZA65_RS08375	0.39	+0.0
1,766,698	+		DZA65_RS08375	0.40	-0.1
1,766,858	+		DZA65_RS08375	0.51	+0.4
1,766,858	+		DZA65_RS08375	0.51	+0.4
1,766,859	-		DZA65_RS08375	0.51	-3.3
1,766,859	-		DZA65_RS08375	0.51	-1.4
1,766,878	+		DZA65_RS08375	0.52	+0.4
1,766,879	-		DZA65_RS08375	0.52	-0.2