Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08240

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,730,885	+				-1.4
1,730,886	-				-3.0
1,730,888	+				-1.1
1,730,888	+				-0.6
1,730,889	-				-0.7
1,730,889	-				-0.3
1,730,889	-				-0.1
1,730,898	-				+0.7
1,730,898	-				+0.4
1,730,943	+				+0.1
1,730,943	+				-1.1
1,730,943	+				+0.2
1,730,943	+				+1.3
1,730,944	-				-0.8
1,730,959	+				-0.8
1,730,974	+				-1.1
1,730,974	+				-0.3
1,730,974	+				+3.0
1,730,974	+				+0.5
1,730,975	-				-1.6
1,730,975	-				-1.3
1,730,975	-				-0.4
1,730,999	+				+1.0
1,731,000	-				+0.7
1,731,005	+				+0.4
1,731,024	+				+0.3
1,731,024	+				-0.4
1,731,025	-				-0.1
1,731,025	-				-0.6
1,731,025	-				-1.0
1,731,025	-				+0.4
1,731,025	-				-0.9
1,731,025	-				-0.6
1,731,027	+				-0.6
1,731,027	+				+0.9
1,731,028	-				-0.4
1,731,038	+		DZA65_RS08235	0.10	-2.0
1,731,038	+		DZA65_RS08235	0.10	+0.4
1,731,044	+		DZA65_RS08235	0.11	+3.7
1,731,044	+		DZA65_RS08235	0.11	-0.1
1,731,045	-		DZA65_RS08235	0.12	-0.9
1,731,045	-		DZA65_RS08235	0.12	-1.1
1,731,045	-		DZA65_RS08235	0.12	-1.0
1,731,045	-		DZA65_RS08235	0.12	-1.1
1,731,065	+		DZA65_RS08235	0.15	+1.4
1,731,065	+		DZA65_RS08235	0.15	-0.1
1,731,065	+		DZA65_RS08235	0.15	+0.1
1,731,065	+		DZA65_RS08235	0.15	-0.7
1,731,066	-		DZA65_RS08235	0.15	-0.1
1,731,066	-		DZA65_RS08235	0.15	-1.6
1,731,066	-		DZA65_RS08235	0.15	+0.9
1,731,068	+		DZA65_RS08235	0.15	-1.6
1,731,068	+		DZA65_RS08235	0.15	+1.0
1,731,068	+		DZA65_RS08235	0.15	+0.9
1,731,069	-		DZA65_RS08235	0.15	+2.0
1,731,069	-		DZA65_RS08235	0.15	-1.7
1,731,069	-		DZA65_RS08235	0.15	-2.1
1,731,075	+		DZA65_RS08235	0.16	+0.4
1,731,076	-		DZA65_RS08235	0.17	-2.1
1,731,168	+		DZA65_RS08235	0.31	-0.6
1,731,168	+		DZA65_RS08235	0.31	-0.3
1,731,168	+		DZA65_RS08235	0.31	-1.6
1,731,169	-		DZA65_RS08235	0.31	-1.0
1,731,173	+		DZA65_RS08235	0.32	-0.0
1,731,173	+		DZA65_RS08235	0.32	-0.1
1,731,173	+		DZA65_RS08235	0.32	-0.6
1,731,173	+		DZA65_RS08235	0.32	+0.8
1,731,174	-		DZA65_RS08235	0.32	-1.1
1,731,174	-		DZA65_RS08235	0.32	-0.6
1,731,174	-		DZA65_RS08235	0.32	-0.9
1,731,174	-		DZA65_RS08235	0.32	-0.5
1,731,177	+		DZA65_RS08235	0.33	-1.1
1,731,177	+		DZA65_RS08235	0.33	-0.8
1,731,178	-		DZA65_RS08235	0.33	-0.6
1,731,178	-		DZA65_RS08235	0.33	+2.2
1,731,211	+		DZA65_RS08235	0.38	-0.4
1,731,340	+		DZA65_RS08235	0.59	+0.9
1,731,341	-		DZA65_RS08235	0.59	+1.4
1,731,350	+		DZA65_RS08235	0.60	+1.3
1,731,439	+		DZA65_RS08235	0.75	-0.7
1,731,445	+		DZA65_RS08235	0.76	-1.5
1,731,445	+		DZA65_RS08235	0.76	-0.1
1,731,445	+		DZA65_RS08235	0.76	+0.6
1,731,445	+		DZA65_RS08235	0.76	-0.5
1,731,446	-		DZA65_RS08235	0.76	+0.2
1,731,446	-		DZA65_RS08235	0.76	-1.2
1,731,446	-		DZA65_RS08235	0.76	+0.7
1,731,458	+		DZA65_RS08235	0.78	-2.1
1,731,458	+		DZA65_RS08235	0.78	-0.9
1,731,459	-		DZA65_RS08235	0.78	-0.3
1,731,459	-		DZA65_RS08235	0.78	+0.1
1,731,470	+		DZA65_RS08235	0.80	+0.4
1,731,471	-		DZA65_RS08235	0.80	-0.9
1,731,505	+		DZA65_RS08235	0.85	-1.3
1,731,592	-				-0.6
1,731,598	+				-0.4
1,731,604	+				-0.3
1,731,604	+				-0.7
1,731,670	-				-0.7
1,731,735	-				-0.3
1,731,745	-				+0.4
1,731,752	+				-0.1
1,731,765	-				-0.7
1,731,784	+				-1.2
1,731,784	+				-0.2
1,731,784	+				-0.1
1,731,784	+				-0.3
1,731,784	+				+0.1
1,731,784	+				-0.5
1,731,785	-				+0.2
1,731,785	-				-0.2
1,731,785	-				-1.1
1,731,785	-				-0.6
1,731,785	-				-2.6
1,731,785	-				-0.4
1,731,785	-				+0.8
1,731,798	+				-0.7
1,731,853	+				-0.6
1,731,928	+				+2.0
1,731,929	-		DZA65_RS08240	0.10	+0.0
1,731,929	-		DZA65_RS08240	0.10	+0.6
1,731,967	+		DZA65_RS08240	0.14	+0.7
1,732,028	+		DZA65_RS08240	0.19	-0.4
1,732,162	+				-0.1
1,732,162	+		DZA65_RS08240	0.32	-1.1
1,732,172	+		DZA65_RS08240	0.33	+0.4
1,732,172	+		DZA65_RS08240	0.33	-0.1
1,732,172	+		DZA65_RS08240	0.33	-1.1
1,732,172	+		DZA65_RS08240	0.33	-1.1
1,732,173	-		DZA65_RS08240	0.33	-0.8
1,732,249	+		DZA65_RS08240	0.40	+0.4
1,732,249	+		DZA65_RS08240	0.40	-1.1
1,732,249	+		DZA65_RS08240	0.40	+1.3
1,732,249	+		DZA65_RS08240	0.40	-0.8
1,732,250	-		DZA65_RS08240	0.40	-0.6
1,732,250	-		DZA65_RS08240	0.40	-0.4
1,732,250	-		DZA65_RS08240	0.40	+0.2
1,732,295	+		DZA65_RS08240	0.44	-0.7
1,732,317	+		DZA65_RS08240	0.46	-1.6
1,732,317	+		DZA65_RS08240	0.46	-0.7
1,732,317	+		DZA65_RS08240	0.46	-1.6
1,732,317	+		DZA65_RS08240	0.46	-0.1
1,732,317	+		DZA65_RS08240	0.46	-0.8
1,732,318	-		DZA65_RS08240	0.46	-0.4
1,732,318	-		DZA65_RS08240	0.46	-1.9
1,732,318	-		DZA65_RS08240	0.46	-0.1
1,732,318	-		DZA65_RS08240	0.46	+2.0
1,732,318	-		DZA65_RS08240	0.46	+0.1
1,732,318	-		DZA65_RS08240	0.46	-0.6
1,732,318	-		DZA65_RS08240	0.46	-1.6
1,732,318	-		DZA65_RS08240	0.46	+0.2
1,732,320	-		DZA65_RS08240	0.46	+1.2
1,732,438	+				-1.1
1,732,438	+		DZA65_RS08240	0.58	-0.4
1,732,439	-		DZA65_RS08240	0.58	-0.1
1,732,439	-		DZA65_RS08240	0.58	-0.1
1,732,448	-		DZA65_RS08240	0.58	+1.2
1,732,462	+		DZA65_RS08240	0.60	-0.3
1,732,462	+		DZA65_RS08240	0.60	-0.4
1,732,463	-		DZA65_RS08240	0.60	+0.6
1,732,601	-		DZA65_RS08240	0.73	-0.1
1,732,601	-		DZA65_RS08240	0.73	+0.4
1,732,676	-		DZA65_RS08240	0.80	-1.0
1,732,729	+		DZA65_RS08240	0.85	-0.1
1,732,729	+		DZA65_RS08240	0.85	+0.2
1,732,729	+		DZA65_RS08240	0.85	+0.2
1,732,730	-		DZA65_RS08240	0.85	+0.6
1,732,730	-		DZA65_RS08240	0.85	+0.0
1,732,730	-		DZA65_RS08240	0.85	+0.4
1,732,745	+		DZA65_RS08240	0.86	+0.4
1,732,746	-		DZA65_RS08240	0.86	-1.0
1,732,746	-		DZA65_RS08240	0.86	-0.8
1,732,746	-		DZA65_RS08240	0.86	+0.8
1,732,814	+				+0.1
1,732,814	+				+0.4
1,732,814	+				-0.6
1,732,814	+				-0.2
1,732,919	+				-0.1
1,732,919	+				+0.2
1,732,920	-				+0.4
1,732,934	+				-1.1
1,732,934	+				-0.2
1,732,934	+				+1.6
1,732,934	+				+0.3
1,732,935	-				+0.2
1,732,935	-				+0.4
1,732,935	-				+0.0
1,732,935	-				-2.1
1,732,935	-				+0.3
1,732,935	-				-0.6
1,732,935	-				+0.5
1,732,935	-				-0.0
1,732,937	+				-1.1
1,732,937	+				+1.0
1,732,937	+				+2.4
1,732,937	+				-2.0
1,732,937	+				+1.3
1,732,938	-				-0.3
1,732,938	-				+0.3
1,732,966	-				-0.6
1,732,993	+				+1.2
1,732,993	+				-0.4
1,732,993	+				+0.6
1,732,993	+				+0.4
1,732,994	-				-0.2
1,732,994	-				-0.9
1,733,000	+				-0.9
1,733,001	-				-1.6
1,733,001	-				+0.4
1,733,001	-				-0.4
1,733,114	-		DZA65_RS08245	0.20	+0.4
1,733,114	-		DZA65_RS08245	0.20	+2.4
1,733,150	+		DZA65_RS08245	0.23	-1.9
1,733,151	-		DZA65_RS08245	0.24	+0.8
1,733,189	+		DZA65_RS08245	0.27	+0.1
1,733,189	+		DZA65_RS08245	0.27	+0.1
1,733,190	-		DZA65_RS08245	0.27	+2.0
1,733,279	+		DZA65_RS08245	0.35	+0.6
1,733,387	+		DZA65_RS08245	0.45	-0.6
1,733,387	+		DZA65_RS08245	0.45	+0.6
1,733,392	+		DZA65_RS08245	0.46	+0.7
1,733,393	-		DZA65_RS08245	0.46	-0.1
1,733,393	-		DZA65_RS08245	0.46	+0.4
1,733,486	+		DZA65_RS08245	0.54	-1.1
1,733,486	+				+0.4
1,733,486	+		DZA65_RS08245	0.54	-0.1
1,733,487	-		DZA65_RS08245	0.54	-0.3
1,733,487	-		DZA65_RS08245	0.54	-0.2
1,733,487	-		DZA65_RS08245	0.54	+0.4
1,733,487	-		DZA65_RS08245	0.54	-0.0
1,733,487	-		DZA65_RS08245	0.54	-1.9
1,733,487	-		DZA65_RS08245	0.54	-0.6
1,733,487	-		DZA65_RS08245	0.54	-1.1
1,733,491	+		DZA65_RS08245	0.55	+1.6
1,733,491	+		DZA65_RS08245	0.55	+0.2
1,733,491	+		DZA65_RS08245	0.55	+0.7
1,733,491	+		DZA65_RS08245	0.55	-0.6
1,733,491	+		DZA65_RS08245	0.55	-0.7
1,733,492	-		DZA65_RS08245	0.55	-1.7
1,733,492	-		DZA65_RS08245	0.55	+1.8
1,733,492	-		DZA65_RS08245	0.55	+1.7
1,733,492	-		DZA65_RS08245	0.55	-0.3
1,733,537	+		DZA65_RS08245	0.59	-1.4
1,733,538	-		DZA65_RS08245	0.59	-0.9
1,733,538	-		DZA65_RS08245	0.59	+0.2
1,733,700	-		DZA65_RS08245	0.74	-1.6
1,733,739	+		DZA65_RS08245	0.77	-0.1
1,733,852	+		DZA65_RS08245	0.88	-0.4
1,733,885	+				+0.4
1,733,885	+				-1.1
1,733,885	+				+0.4
1,733,885	+				-0.9
1,733,885	+				-0.1
1,733,886	-				+1.0