Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07370

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
1,534,119	+				-1.4
1,534,119	+				+0.5
1,534,125	+				+0.1
1,534,125	+				-0.3
1,534,125	+				+3.6
1,534,125	+				+0.0
1,534,125	+				-0.2
1,534,126	-				+0.6
1,534,126	-				-1.6
1,534,126	-				+0.9
1,534,126	-				+0.6
1,534,126	-				-0.4
1,534,131	+				-0.7
1,534,157	+				-0.1
1,534,158	-				+0.4
1,534,394	+		DZA65_RS07365	0.28	-1.2
1,534,395	-		DZA65_RS07365	0.28	-0.0
1,534,395	-		DZA65_RS07365	0.28	+0.1
1,534,421	+		DZA65_RS07365	0.32	+0.2
1,534,432	-		DZA65_RS07365	0.33	-1.9
1,534,432	-		DZA65_RS07365	0.33	+0.4
1,534,448	+		DZA65_RS07365	0.35	-0.3
1,534,448	+		DZA65_RS07365	0.35	-0.0
1,534,448	+		DZA65_RS07365	0.35	-0.4
1,534,470	+		DZA65_RS07365	0.38	-0.3
1,534,470	+		DZA65_RS07365	0.38	-0.2
1,534,471	-		DZA65_RS07365	0.38	+0.4
1,534,471	-		DZA65_RS07365	0.38	-0.2
1,534,471	-		DZA65_RS07365	0.38	-2.2
1,534,492	+		DZA65_RS07365	0.41	+1.0
1,534,492	+		DZA65_RS07365	0.41	+0.1
1,534,492	+		DZA65_RS07365	0.41	+0.9
1,534,492	+		DZA65_RS07365	0.41	-0.1
1,534,493	-		DZA65_RS07365	0.41	+0.1
1,534,493	-		DZA65_RS07365	0.41	-0.6
1,534,525	+		DZA65_RS07365	0.45	-0.8
1,534,526	-		DZA65_RS07365	0.45	-0.9
1,534,606	+		DZA65_RS07365	0.56	-0.9
1,534,606	+		DZA65_RS07365	0.56	-1.0
1,534,607	-		DZA65_RS07365	0.56	-1.4
1,534,607	-		DZA65_RS07365	0.56	+1.1
1,534,607	-		DZA65_RS07365	0.56	-0.4
1,534,737	+		DZA65_RS07365	0.73	+1.2
1,534,738	-		DZA65_RS07365	0.73	-2.6
1,534,839	+		DZA65_RS07365	0.87	+0.6
1,534,840	-		DZA65_RS07365	0.87	+0.7
1,534,856	+		DZA65_RS07365	0.89	-1.0
1,534,856	+		DZA65_RS07365	0.89	+0.6
1,534,856	+		DZA65_RS07365	0.89	-0.0
1,534,856	+		DZA65_RS07365	0.89	-0.2
1,534,856	+		DZA65_RS07365	0.89	-0.8
1,534,856	+		DZA65_RS07365	0.89	-1.5
1,534,856	+		DZA65_RS07365	0.89	+0.2
1,534,856	+		DZA65_RS07365	0.89	-0.8
1,534,857	-		DZA65_RS07365	0.89	+0.0
1,534,857	-		DZA65_RS07365	0.89	+1.4
1,534,857	-		DZA65_RS07365	0.89	-0.8
1,534,857	-		DZA65_RS07365	0.89	-0.4
1,534,886	-				+1.4
1,534,886	-				-0.5
1,534,918	+				-2.5
1,534,918	+				-1.0
1,534,918	+				-0.9
1,534,918	+				+0.6
1,534,919	-				+1.8
1,534,919	-				-0.7
1,534,958	+				+1.0
1,534,959	-				+1.4
1,534,962	-				+1.6
1,534,962	-				-1.0
1,534,996	+				-0.2
1,534,996	+				+0.6
1,534,997	-				-1.3
1,534,999	+				-0.4
1,534,999	+				+0.1
1,534,999	+				-0.8
1,535,015	+				+1.6
1,535,016	-				+0.4
1,535,016	-				+0.9
1,535,016	-				-0.8
1,535,017	+				+0.6
1,535,018	-				+0.1
1,535,022	+				-1.4
1,535,022	+				+0.2
1,535,023	-				+1.0
1,535,023	-				-0.9
1,535,031	+				+0.3
1,535,056	-				+1.4
1,535,088	+				-0.4
1,535,088	+				+2.0
1,535,088	+				+0.9
1,535,089	-				+0.6
1,535,090	+				-0.0
1,535,090	+				-0.0
1,535,091	-				-0.0
1,535,091	-				-1.6
1,535,105	+				+1.0
1,535,105	+				-0.9
1,535,106	-				-0.4
1,535,186	+				-1.8
1,535,186	+				-0.6
1,535,207	+		DZA65_RS07370	0.12	-1.8
1,535,298	+		DZA65_RS07370	0.22	-0.3
1,535,298	+		DZA65_RS07370	0.22	+2.1
1,535,298	+		DZA65_RS07370	0.22	-0.0
1,535,298	+		DZA65_RS07370	0.22	+0.2
1,535,299	-		DZA65_RS07370	0.22	+0.9
1,535,299	-		DZA65_RS07370	0.22	-1.4
1,535,299	-		DZA65_RS07370	0.22	+0.6
1,535,299	-		DZA65_RS07370	0.22	+0.3
1,535,299	-		DZA65_RS07370	0.22	+1.6
1,535,299	-		DZA65_RS07370	0.22	+0.1
1,535,313	+		DZA65_RS07370	0.24	-0.3
1,535,313	+		DZA65_RS07370	0.24	+0.1
1,535,313	+		DZA65_RS07370	0.24	-3.3
1,535,313	+		DZA65_RS07370	0.24	+0.6
1,535,313	+		DZA65_RS07370	0.24	-0.2
1,535,314	-		DZA65_RS07370	0.24	-1.9
1,535,379	+		DZA65_RS07370	0.31	-0.4
1,535,379	+		DZA65_RS07370	0.31	-1.3
1,535,379	+		DZA65_RS07370	0.31	-0.4
1,535,379	+		DZA65_RS07370	0.31	-0.4
1,535,379	+		DZA65_RS07370	0.31	-1.8
1,535,380	-		DZA65_RS07370	0.31	-1.0
1,535,380	-		DZA65_RS07370	0.31	+0.8
1,535,380	-		DZA65_RS07370	0.31	+0.5
1,535,413	+		DZA65_RS07370	0.35	+1.1
1,535,413	+		DZA65_RS07370	0.35	-0.8
1,535,414	-		DZA65_RS07370	0.35	-1.6
1,535,414	-		DZA65_RS07370	0.35	-0.0
1,535,477	+		DZA65_RS07370	0.42	-0.9
1,535,477	+		DZA65_RS07370	0.42	-0.0
1,535,478	-		DZA65_RS07370	0.42	-0.4
1,535,478	-		DZA65_RS07370	0.42	-0.4
1,535,482	+		DZA65_RS07370	0.42	-0.8
1,535,483	-		DZA65_RS07370	0.43	-1.0
1,535,483	-		DZA65_RS07370	0.43	+0.4
1,535,483	-		DZA65_RS07370	0.43	+0.7
1,535,483	-		DZA65_RS07370	0.43	+0.6
1,535,483	-		DZA65_RS07370	0.43	+1.6
1,535,483	-		DZA65_RS07370	0.43	+0.2
1,535,510	+		DZA65_RS07370	0.46	+0.6
1,535,510	+		DZA65_RS07370	0.46	+0.6
1,535,510	+		DZA65_RS07370	0.46	-0.4
1,535,511	-		DZA65_RS07370	0.46	+0.1
1,535,524	+		DZA65_RS07370	0.47	+0.9
1,535,525	-		DZA65_RS07370	0.47	+0.6
1,535,525	-		DZA65_RS07370	0.47	+0.7
1,535,525	-		DZA65_RS07370	0.47	+1.7
1,535,525	-		DZA65_RS07370	0.47	-0.3
1,535,525	-		DZA65_RS07370	0.47	-0.7
1,535,527	+		DZA65_RS07370	0.47	+1.2
1,535,527	+		DZA65_RS07370	0.47	-0.4
1,535,527	+		DZA65_RS07370	0.47	+1.9
1,535,528	-		DZA65_RS07370	0.48	+0.6
1,535,528	-		DZA65_RS07370	0.48	+0.4
1,535,571	-		DZA65_RS07370	0.52	-0.4
1,535,571	-		DZA65_RS07370	0.52	-0.2
1,535,697	+		DZA65_RS07370	0.66	+0.5
1,535,697	+		DZA65_RS07370	0.66	+0.6
1,535,697	+		DZA65_RS07370	0.66	-0.0
1,535,697	+		DZA65_RS07370	0.66	+0.4
1,535,697	+		DZA65_RS07370	0.66	-1.0
1,535,697	+		DZA65_RS07370	0.66	+3.9
1,535,697	+		DZA65_RS07370	0.66	+0.3
1,535,697	+		DZA65_RS07370	0.66	-0.7
1,535,697	+		DZA65_RS07370	0.66	-0.4
1,535,697	+				+1.6
1,535,697	+		DZA65_RS07370	0.66	+0.9
1,535,697	+		DZA65_RS07370	0.66	-0.4
1,535,698	-		DZA65_RS07370	0.66	+1.2
1,535,698	-		DZA65_RS07370	0.66	-3.2
1,535,698	-		DZA65_RS07370	0.66	-0.9
1,535,698	-		DZA65_RS07370	0.66	-1.4
1,535,698	-		DZA65_RS07370	0.66	-0.0
1,535,698	-		DZA65_RS07370	0.66	+1.2
1,535,698	-		DZA65_RS07370	0.66	+1.1
1,535,698	-		DZA65_RS07370	0.66	+2.9
1,535,698	-		DZA65_RS07370	0.66	+1.1
1,535,698	-		DZA65_RS07370	0.66	-0.6
1,535,698	-		DZA65_RS07370	0.66	+0.3
1,535,698	-		DZA65_RS07370	0.66	-0.8
1,535,734	+		DZA65_RS07370	0.70	+0.6
1,535,802	+		DZA65_RS07370	0.78	+1.9
1,535,802	+		DZA65_RS07370	0.78	+0.8
1,535,816	+		DZA65_RS07370	0.80	-0.6
1,535,817	-		DZA65_RS07370	0.80	+0.2
1,535,890	-		DZA65_RS07370	0.88	-1.9
1,535,919	+				+0.6
1,535,956	+				+0.3
1,535,957	-				-1.0
1,535,957	-				-0.0
1,535,966	-				-1.0
1,535,997	+				+0.5
1,535,997	+				-2.3
1,535,998	-				-0.2
1,535,998	-				-1.9
1,536,049	+				-2.3
1,536,049	+				-0.5
1,536,050	-				+1.1
1,536,099	+				-0.2
1,536,143	+				+0.4
1,536,143	+				+0.4
1,536,143	+				-1.2
1,536,143	+				-1.5
1,536,144	-				+0.4
1,536,144	-				+1.2
1,536,144	-				+1.7
1,536,176	+		DZA65_RS07375	0.11	-0.2
1,536,195	+		DZA65_RS07375	0.15	-0.5
1,536,195	+		DZA65_RS07375	0.15	+0.0
1,536,195	+		DZA65_RS07375	0.15	+0.0
1,536,196	-		DZA65_RS07375	0.15	+1.8
1,536,196	-		DZA65_RS07375	0.15	+0.2
1,536,270	+		DZA65_RS07375	0.27	-0.7
1,536,270	+		DZA65_RS07375	0.27	-0.8
1,536,270	+		DZA65_RS07375	0.27	-0.3
1,536,270	+		DZA65_RS07375	0.27	-0.8
1,536,270	+		DZA65_RS07375	0.27	-0.2
1,536,270	+		DZA65_RS07375	0.27	+1.8
1,536,270	+		DZA65_RS07375	0.27	+1.3
1,536,270	+		DZA65_RS07375	0.27	-0.3
1,536,270	+		DZA65_RS07375	0.27	+0.5
1,536,270	+		DZA65_RS07375	0.27	+0.4
1,536,270	+		DZA65_RS07375	0.27	-0.5
1,536,270	+		DZA65_RS07375	0.27	-1.0
1,536,270	+		DZA65_RS07375	0.27	-0.3
1,536,271	-		DZA65_RS07375	0.27	+0.1
1,536,271	-		DZA65_RS07375	0.27	-0.0
1,536,271	-		DZA65_RS07375	0.27	+0.1
1,536,271	-		DZA65_RS07375	0.27	-1.1
1,536,271	-				-0.0
1,536,271	-		DZA65_RS07375	0.27	-0.4
1,536,271	-		DZA65_RS07375	0.27	+1.5
1,536,272	+		DZA65_RS07375	0.27	-0.5
1,536,273	-		DZA65_RS07375	0.28	+0.6
1,536,278	+		DZA65_RS07375	0.28	-0.2
1,536,278	+		DZA65_RS07375	0.28	-0.3
1,536,278	+		DZA65_RS07375	0.28	+0.1
1,536,278	+		DZA65_RS07375	0.28	-1.0
1,536,278	+		DZA65_RS07375	0.28	-2.8
1,536,278	+		DZA65_RS07375	0.28	-1.0
1,536,278	+		DZA65_RS07375	0.28	-0.5
1,536,279	-		DZA65_RS07375	0.29	+0.5
1,536,279	-		DZA65_RS07375	0.29	+0.6
1,536,279	-		DZA65_RS07375	0.29	-2.0
1,536,279	-		DZA65_RS07375	0.29	+0.5
1,536,280	+		DZA65_RS07375	0.29	+0.5
1,536,281	-		DZA65_RS07375	0.29	+0.1
1,536,281	-		DZA65_RS07375	0.29	-2.3
1,536,281	-		DZA65_RS07375	0.29	-0.7
1,536,281	-		DZA65_RS07375	0.29	+0.4
1,536,319	+		DZA65_RS07375	0.35	+1.1
1,536,319	+		DZA65_RS07375	0.35	+0.6
1,536,320	-		DZA65_RS07375	0.35	-1.3
1,536,450	+		DZA65_RS07375	0.57	-0.0
1,536,451	-		DZA65_RS07375	0.57	+0.1
1,536,451	-		DZA65_RS07375	0.57	-0.9
1,536,457	+		DZA65_RS07375	0.58	-0.9
1,536,457	+		DZA65_RS07375	0.58	+0.2
1,536,457	+				+1.5
1,536,457	+		DZA65_RS07375	0.58	-0.0
1,536,458	-		DZA65_RS07375	0.58	+1.2
1,536,458	-		DZA65_RS07375	0.58	+0.5
1,536,459	+		DZA65_RS07375	0.58	-0.5
1,536,459	+		DZA65_RS07375	0.58	+0.3
1,536,459	+		DZA65_RS07375	0.58	+0.5
1,536,459	+		DZA65_RS07375	0.58	+1.1
1,536,459	+		DZA65_RS07375	0.58	+2.0
1,536,459	+		DZA65_RS07375	0.58	+0.8
1,536,459	+		DZA65_RS07375	0.58	+0.6
1,536,459	+		DZA65_RS07375	0.58	-1.1
1,536,459	+		DZA65_RS07375	0.58	+0.5
1,536,460	-		DZA65_RS07375	0.59	-0.5
1,536,460	-		DZA65_RS07375	0.59	+1.0
1,536,460	-		DZA65_RS07375	0.59	-1.3
1,536,474	+		DZA65_RS07375	0.61	-2.3
1,536,474	+		DZA65_RS07375	0.61	-0.2
1,536,475	-		DZA65_RS07375	0.61	+0.2
1,536,475	-		DZA65_RS07375	0.61	-0.5
1,536,493	+		DZA65_RS07375	0.64	+0.5
1,536,494	-		DZA65_RS07375	0.64	+1.9
1,536,494	-		DZA65_RS07375	0.64	+0.8
1,536,494	-		DZA65_RS07375	0.64	-0.2
1,536,503	+		DZA65_RS07375	0.66	-0.0
1,536,504	-		DZA65_RS07375	0.66	+0.9
1,536,536	+		DZA65_RS07375	0.71	+0.1
1,536,537	-		DZA65_RS07375	0.71	+0.5
1,536,542	+		DZA65_RS07375	0.72	-2.0
1,536,542	+		DZA65_RS07375	0.72	+1.4
1,536,543	-		DZA65_RS07375	0.72	+1.5
1,536,543	-		DZA65_RS07375	0.72	-0.5
1,536,592	+		DZA65_RS07375	0.80	+0.3
1,536,658	+				+1.0
1,536,658	+				-0.7
1,536,658	+				-1.3
1,536,658	+				-0.7
1,536,658	+				+0.5
1,536,659	-				+0.8
1,536,659	-				-0.8
1,536,659	-				-0.5
1,536,659	-				-0.3
1,536,671	+				-0.8
1,536,703	+				-2.0
1,536,703	+				+0.6
1,536,704	-				-1.0
1,536,711	+				-1.8
1,536,711	+				+0.3
1,536,712	-				-1.5
1,536,712	-				+0.1
1,536,712	-				-0.7
1,536,712	-				+0.5
1,536,712	-				+0.2
1,536,712	-				-0.2
1,536,847	+				-1.0
1,536,847	+				+0.1
1,536,847	+				-0.0
1,536,847	+				-1.0
1,536,847	+				+0.5
1,536,848	-				-0.3
1,536,848	-				+0.5
1,536,848	-				-0.3
1,536,848	-				-0.1
1,536,848	-				+0.1
1,536,848	-				+0.1
1,536,848	-				-0.0
1,536,848	-				-1.0
1,536,851	+				+1.1
1,536,851	+				+3.5
1,536,851	+				+0.1
1,536,851	+				-0.6
1,536,864	+				-1.0
1,536,865	-				-1.5
1,536,866	+				-0.1
1,536,906	+				-0.1
1,536,906	+				+0.2
1,536,914	-				+1.0