Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22305

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,823,525	+				+1.0
4,823,526	-				-0.2
4,823,548	-				+0.5
4,823,577	-				-0.4
4,823,593	+				-0.2
4,823,593	+				-0.6
4,823,593	+				-1.1
4,823,593	+				-0.0
4,823,593	+				-0.2
4,823,594	-				-1.2
4,823,609	+				+1.2
4,823,609	+				+0.2
4,823,610	-				+0.0
4,823,653	+				-0.2
4,823,654	-				-1.4
4,823,752	+		DZA65_RS22300	0.16	-1.5
4,823,752	+		DZA65_RS22300	0.16	+1.1
4,823,752	+		DZA65_RS22300	0.16	+1.4
4,823,753	-		DZA65_RS22300	0.16	+0.8
4,823,753	-		DZA65_RS22300	0.16	+0.1
4,823,791	+		DZA65_RS22300	0.21	-0.1
4,823,791	+		DZA65_RS22300	0.21	+0.8
4,823,791	+		DZA65_RS22300	0.21	+0.1
4,823,792	-		DZA65_RS22300	0.21	-1.5
4,823,874	+		DZA65_RS22300	0.30	+2.3
4,823,985	+		DZA65_RS22300	0.42	+0.4
4,823,985	+		DZA65_RS22300	0.42	+1.5
4,823,985	+		DZA65_RS22300	0.42	-2.0
4,823,985	+		DZA65_RS22300	0.42	+0.8
4,823,985	+				-0.7
4,823,986	-		DZA65_RS22300	0.42	-2.3
4,824,129	+		DZA65_RS22300	0.58	+0.5
4,824,207	+		DZA65_RS22300	0.67	-0.6
4,824,207	+		DZA65_RS22300	0.67	-0.6
4,824,207	+		DZA65_RS22300	0.67	-0.5
4,824,207	+		DZA65_RS22300	0.67	-1.1
4,824,207	+		DZA65_RS22300	0.67	+2.1
4,824,207	+		DZA65_RS22300	0.67	+3.4
4,824,208	-		DZA65_RS22300	0.67	+0.8
4,824,208	-		DZA65_RS22300	0.67	-0.9
4,824,211	+		DZA65_RS22300	0.68	+1.6
4,824,301	-		DZA65_RS22300	0.78	+0.5
4,824,301	-		DZA65_RS22300	0.78	+0.2
4,824,301	-		DZA65_RS22300	0.78	-0.9
4,824,301	-		DZA65_RS22300	0.78	+0.4
4,824,301	-		DZA65_RS22300	0.78	-0.4
4,824,329	+		DZA65_RS22300	0.81	-0.7
4,824,329	+		DZA65_RS22300	0.81	-1.0
4,824,329	+		DZA65_RS22300	0.81	-0.9
4,824,329	+		DZA65_RS22300	0.81	+0.3
4,824,329	+		DZA65_RS22300	0.81	+0.6
4,824,329	+		DZA65_RS22300	0.81	-0.1
4,824,329	+		DZA65_RS22300	0.81	-0.4
4,824,330	-		DZA65_RS22300	0.81	-0.8
4,824,387	+		DZA65_RS22300	0.87	-1.0
4,824,388	-		DZA65_RS22300	0.88	-1.3
4,824,418	-				+0.4
4,824,477	+				+0.3
4,824,477	+				+1.4
4,824,477	+				-0.3
4,824,477	+				-0.2
4,824,477	+				+0.4
4,824,477	+				-1.2
4,824,477	+				-1.0
4,824,477	+				+0.2
4,824,477	+				-0.3
4,824,477	+				+0.6
4,824,477	+				+0.6
4,824,477	+				-0.2
4,824,477	+				+1.4
4,824,477	+				+1.0
4,824,477	+				-1.0
4,824,477	+				+1.0
4,824,477	+				+0.1
4,824,477	+				+0.6
4,824,478	-				+1.1
4,824,478	-				-0.1
4,824,478	-				-0.4
4,824,478	-				-0.4
4,824,478	-				-0.3
4,824,478	-				-0.5
4,824,478	-				-0.3
4,824,481	+				+0.3
4,824,481	+				+0.0
4,824,481	+				-0.4
4,824,481	+				+0.3
4,824,481	+				+0.7
4,824,481	+				-1.0
4,824,481	+				+0.5
4,824,481	+				+0.4
4,824,481	+				+0.4
4,824,481	+				-0.4
4,824,481	+				+0.3
4,824,481	+				-1.5
4,824,481	+				+0.6
4,824,482	-				-1.0
4,824,482	-				-0.2
4,824,482	-				-1.1
4,824,482	-				-1.7
4,824,482	-				-0.3
4,824,482	-				-0.5
4,824,482	-				-1.3
4,824,482	-				+0.6
4,824,482	-				-0.6
4,824,482	-				+0.6
4,824,482	-				-0.8
4,824,498	+				+1.7
4,824,526	+				-2.6
4,824,527	-				-1.0
4,824,527	-				+0.8
4,824,527	-				+0.3
4,824,530	+				+0.8
4,824,530	+				-0.5
4,824,530	+				+0.1
4,824,530	+				-0.5
4,824,531	-				-0.7
4,824,531	-				+1.1
4,824,542	+				-0.4
4,824,542	+				-1.7
4,824,542	+				+0.6
4,824,542	+				-0.5
4,824,542	+				-0.1
4,824,543	-				-0.6
4,824,543	-				-1.1
4,824,543	-				+0.5
4,824,543	-				-1.0
4,824,546	+				+1.3
4,824,547	-				-1.2
4,824,547	-				-1.1
4,824,547	-				-0.8
4,824,547	-				-2.0
4,824,566	+				-0.2
4,824,567	-				-0.2
4,824,592	+				-1.6
4,824,592	+				+0.4
4,824,592	+				+0.3
4,824,592	+				-1.7
4,824,592	+				-1.6
4,824,592	+				-0.5
4,824,593	-				-1.0
4,824,593	-				-0.9
4,824,593	-				+0.8
4,824,593	-				+1.5
4,824,595	+				-2.0
4,824,595	+				-0.1
4,824,595	+				-0.4
4,824,595	+				-0.6
4,824,595	+				-1.1
4,824,595	+				+2.0
4,824,595	+				+0.6
4,824,596	-				-1.3
4,824,596	-				+0.4
4,824,596	-				+1.3
4,824,596	-				-1.9
4,824,609	+				+0.8
4,824,609	+				+0.8
4,824,617	+				-0.2
4,824,617	+				-0.3
4,824,617	+				+0.6
4,824,617	+				-1.9
4,824,618	-				+0.8
4,824,618	-				-2.0
4,824,618	-				+1.5
4,824,618	-				-1.7
4,824,618	-				+0.7
4,824,618	-				+0.0
4,824,618	-				+0.5
4,824,618	-				-1.0
4,824,657	+		DZA65_RS22305	0.14	+0.0
4,824,736	+		DZA65_RS22305	0.22	-0.7
4,824,789	-		DZA65_RS22305	0.27	-0.0
4,824,789	-		DZA65_RS22305	0.27	+0.0
4,824,823	+		DZA65_RS22305	0.31	-0.4
4,824,823	+		DZA65_RS22305	0.31	-0.3
4,824,824	-		DZA65_RS22305	0.31	+1.2
4,824,824	-		DZA65_RS22305	0.31	-0.5
4,824,824	-		DZA65_RS22305	0.31	-0.2
4,824,824	-		DZA65_RS22305	0.31	-1.0
4,824,842	+		DZA65_RS22305	0.33	-0.5
4,824,842	+		DZA65_RS22305	0.33	+0.1
4,824,842	+		DZA65_RS22305	0.33	-0.2
4,824,842	+		DZA65_RS22305	0.33	-0.8
4,824,842	+		DZA65_RS22305	0.33	+1.1
4,824,843	-		DZA65_RS22305	0.33	+0.0
4,824,843	-		DZA65_RS22305	0.33	-0.2
4,824,843	-		DZA65_RS22305	0.33	+0.2
4,824,843	-		DZA65_RS22305	0.33	-1.7
4,824,895	+		DZA65_RS22305	0.38	-0.7
4,824,895	+		DZA65_RS22305	0.38	+0.2
4,824,895	+		DZA65_RS22305	0.38	-0.4
4,824,896	-		DZA65_RS22305	0.38	+2.6
4,824,896	-		DZA65_RS22305	0.38	-1.0
4,824,896	-		DZA65_RS22305	0.38	-0.2
4,824,899	+		DZA65_RS22305	0.39	-1.0
4,824,899	+		DZA65_RS22305	0.39	-0.9
4,824,899	+		DZA65_RS22305	0.39	+0.8
4,824,899	+		DZA65_RS22305	0.39	-1.9
4,824,899	+		DZA65_RS22305	0.39	+0.1
4,824,899	+		DZA65_RS22305	0.39	-0.5
4,824,899	+		DZA65_RS22305	0.39	+0.1
4,824,899	+		DZA65_RS22305	0.39	-0.5
4,824,899	+		DZA65_RS22305	0.39	-1.2
4,824,899	+		DZA65_RS22305	0.39	-0.7
4,824,899	+		DZA65_RS22305	0.39	-1.5
4,824,899	+		DZA65_RS22305	0.39	+1.3
4,824,899	+		DZA65_RS22305	0.39	+1.0
4,824,899	+		DZA65_RS22305	0.39	-1.0
4,824,899	+		DZA65_RS22305	0.39	+0.9
4,824,899	+		DZA65_RS22305	0.39	-0.6
4,824,899	+		DZA65_RS22305	0.39	+0.1
4,824,899	+		DZA65_RS22305	0.39	-0.2
4,824,899	+		DZA65_RS22305	0.39	-0.4
4,824,900	-		DZA65_RS22305	0.39	-0.5
4,824,900	-		DZA65_RS22305	0.39	-0.6
4,824,900	-		DZA65_RS22305	0.39	-0.7
4,824,900	-		DZA65_RS22305	0.39	+0.0
4,824,900	-		DZA65_RS22305	0.39	-1.5
4,824,900	-		DZA65_RS22305	0.39	-0.5
4,824,900	-		DZA65_RS22305	0.39	-0.6
4,824,900	-		DZA65_RS22305	0.39	-1.0
4,824,900	-		DZA65_RS22305	0.39	+0.3
4,824,900	-		DZA65_RS22305	0.39	+0.3
4,824,900	-		DZA65_RS22305	0.39	-1.0
4,824,900	-		DZA65_RS22305	0.39	-3.0
4,824,901	+		DZA65_RS22305	0.39	-0.2
4,824,901	+		DZA65_RS22305	0.39	+1.3
4,824,902	-		DZA65_RS22305	0.39	+1.2
4,824,902	-		DZA65_RS22305	0.39	-0.1
4,824,917	+		DZA65_RS22305	0.40	+0.1
4,824,917	+		DZA65_RS22305	0.40	-0.4
4,824,917	+		DZA65_RS22305	0.40	-0.7
4,824,918	-		DZA65_RS22305	0.41	+0.1
4,824,918	-		DZA65_RS22305	0.41	+2.8
4,824,931	+		DZA65_RS22305	0.42	-1.0
4,824,931	+		DZA65_RS22305	0.42	+0.8
4,824,931	+		DZA65_RS22305	0.42	-0.2
4,824,931	+				+1.4
4,824,931	+		DZA65_RS22305	0.42	-0.6
4,824,931	+		DZA65_RS22305	0.42	-0.4
4,824,931	+		DZA65_RS22305	0.42	-0.2
4,824,931	+		DZA65_RS22305	0.42	+0.5
4,824,931	+		DZA65_RS22305	0.42	-1.3
4,824,931	+		DZA65_RS22305	0.42	-0.9
4,824,931	+		DZA65_RS22305	0.42	+0.5
4,824,931	+		DZA65_RS22305	0.42	-1.5
4,824,931	+		DZA65_RS22305	0.42	+0.1
4,824,932	-		DZA65_RS22305	0.42	+0.5
4,824,932	-		DZA65_RS22305	0.42	+1.3
4,824,932	-		DZA65_RS22305	0.42	-1.7
4,824,932	-		DZA65_RS22305	0.42	-0.2
4,824,948	+		DZA65_RS22305	0.44	+1.2
4,824,949	-				-0.2
4,824,978	+		DZA65_RS22305	0.47	+1.4
4,824,979	-		DZA65_RS22305	0.47	-1.2
4,825,062	-		DZA65_RS22305	0.55	-2.0
4,825,062	-		DZA65_RS22305	0.55	+1.4
4,825,062	-		DZA65_RS22305	0.55	-0.4
4,825,062	-		DZA65_RS22305	0.55	-0.3
4,825,063	+		DZA65_RS22305	0.56	-0.3
4,825,063	+		DZA65_RS22305	0.56	+0.1
4,825,063	+		DZA65_RS22305	0.56	+0.1
4,825,063	+		DZA65_RS22305	0.56	-0.2
4,825,063	+		DZA65_RS22305	0.56	-0.4
4,825,063	+		DZA65_RS22305	0.56	+1.3
4,825,063	+		DZA65_RS22305	0.56	-0.8
4,825,063	+		DZA65_RS22305	0.56	-1.2
4,825,063	+		DZA65_RS22305	0.56	+0.1
4,825,063	+		DZA65_RS22305	0.56	+0.3
4,825,063	+		DZA65_RS22305	0.56	-0.4
4,825,063	+		DZA65_RS22305	0.56	+0.3
4,825,063	+		DZA65_RS22305	0.56	-1.6
4,825,063	+		DZA65_RS22305	0.56	-2.4
4,825,063	+		DZA65_RS22305	0.56	+0.3
4,825,063	+		DZA65_RS22305	0.56	-0.5
4,825,063	+		DZA65_RS22305	0.56	+0.2
4,825,063	+		DZA65_RS22305	0.56	+0.6
4,825,063	+		DZA65_RS22305	0.56	+0.1
4,825,063	+		DZA65_RS22305	0.56	+0.0
4,825,063	+		DZA65_RS22305	0.56	+0.2
4,825,063	+		DZA65_RS22305	0.56	+1.6
4,825,064	-		DZA65_RS22305	0.56	+0.3
4,825,064	-				+0.4
4,825,064	-		DZA65_RS22305	0.56	-0.2
4,825,064	-		DZA65_RS22305	0.56	+0.6
4,825,064	-		DZA65_RS22305	0.56	+0.5
4,825,064	-		DZA65_RS22305	0.56	+0.1
4,825,064	-		DZA65_RS22305	0.56	-0.5
4,825,064	-		DZA65_RS22305	0.56	+0.0
4,825,064	-		DZA65_RS22305	0.56	+0.4
4,825,064	-		DZA65_RS22305	0.56	-1.2
4,825,064	-		DZA65_RS22305	0.56	-1.1
4,825,064	-		DZA65_RS22305	0.56	+0.3
4,825,064	-		DZA65_RS22305	0.56	-0.5
4,825,064	-		DZA65_RS22305	0.56	-0.2
4,825,064	-		DZA65_RS22305	0.56	-1.1
4,825,064	-		DZA65_RS22305	0.56	-1.5
4,825,064	-		DZA65_RS22305	0.56	-1.5
4,825,422	+				+0.1
4,825,478	+				-0.6
4,825,479	-				-2.2
4,825,479	-				+0.3
4,825,479	-				-0.1
4,825,502	+				+1.2
4,825,502	+				-0.9
4,825,502	+				-0.2
4,825,502	+				-0.2
4,825,502	+				+0.3
4,825,502	+				+0.0
4,825,502	+				+0.8
4,825,502	+				-0.7
4,825,502	+				+0.3
4,825,502	+				-0.2
4,825,503	-				-2.6
4,825,503	-				-0.3
4,825,503	-				-0.2
4,825,503	-				+1.1
4,825,503	-				-2.2
4,825,503	-				-0.9
4,825,503	-				-1.2
4,825,503	-				+0.4
4,825,503	-				+0.8
4,825,515	-				-1.4
4,825,521	+				+0.6
4,825,521	+				-0.4
4,825,528	+				-0.2
4,825,528	+				+1.6
4,825,529	-				-1.2
4,825,670	+		DZA65_RS22310	0.12	+0.2
4,825,671	-		DZA65_RS22310	0.12	+0.8
4,825,671	-		DZA65_RS22310	0.12	-1.2
4,825,671	-		DZA65_RS22310	0.12	-1.3
4,825,705	-		DZA65_RS22310	0.14	+0.4
4,825,751	+		DZA65_RS22310	0.17	+0.3
4,825,751	+		DZA65_RS22310	0.17	+0.3
4,825,751	+		DZA65_RS22310	0.17	-0.8
4,825,751	+		DZA65_RS22310	0.17	-0.4
4,825,751	+		DZA65_RS22310	0.17	-0.2
4,825,751	+		DZA65_RS22310	0.17	+0.4
4,825,751	+		DZA65_RS22310	0.17	-1.5
4,825,751	+		DZA65_RS22310	0.17	+0.4
4,825,752	-		DZA65_RS22310	0.17	-0.2
4,825,752	-		DZA65_RS22310	0.17	+0.8
4,825,752	-		DZA65_RS22310	0.17	+0.8
4,825,752	-		DZA65_RS22310	0.17	-1.5
4,825,752	-		DZA65_RS22310	0.17	-0.5
4,825,752	-		DZA65_RS22310	0.17	-0.3
4,825,752	-		DZA65_RS22310	0.17	-0.7
4,825,752	-		DZA65_RS22310	0.17	-0.7
4,825,752	-		DZA65_RS22310	0.17	-0.2
4,825,858	+		DZA65_RS22310	0.24	-1.9
4,825,858	+		DZA65_RS22310	0.24	-0.2
4,825,859	-		DZA65_RS22310	0.24	-1.4
4,825,861	+		DZA65_RS22310	0.24	-0.5
4,825,861	+		DZA65_RS22310	0.24	-2.0
4,825,861	+		DZA65_RS22310	0.24	-2.2
4,825,861	+		DZA65_RS22310	0.24	+1.4
4,825,861	+		DZA65_RS22310	0.24	+1.8
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4,826,455	+		DZA65_RS22310	0.64	+3.2