Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21925

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,741,096	+				+0.4
4,741,096	+				+0.6
4,741,096	+				+0.6
4,741,096	+				+1.2
4,741,096	+				-0.2
4,741,096	+				-2.3
4,741,096	+				-1.3
4,741,096	+				-0.2
4,741,096	+				-0.8
4,741,096	+				+0.8
4,741,096	+				+0.8
4,741,097	-				-0.4
4,741,097	-				+0.8
4,741,097	-				-0.8
4,741,097	-				-0.1
4,741,097	-				+0.2
4,741,097	-				-0.8
4,741,097	-				-1.5
4,741,097	-				+0.9
4,741,097	-				-3.2
4,741,097	-				-1.0
4,741,099	+				+0.0
4,741,099	+				-0.0
4,741,099	+				+0.3
4,741,100	-				+2.1
4,741,102	+				-0.9
4,741,103	-				-1.5
4,741,168	+				-0.5
4,741,168	+				+1.0
4,741,168	+				+0.3
4,741,168	+				-2.2
4,741,168	+				-0.5
4,741,169	-				+0.2
4,741,182	-				-0.2
4,741,182	-				+0.8
4,741,242	+				+0.1
4,741,242	+				-1.0
4,741,243	-				-0.3
4,741,243	-				-0.2
4,741,244	+				+0.0
4,741,245	-				-1.4
4,741,252	+				-0.9
4,741,260	-				+1.4
4,741,291	-				+1.4
4,741,297	-				+1.4
4,741,301	+				+0.8
4,741,305	+				+0.7
4,741,315	-				+1.0
4,741,315	-				+2.3
4,741,377	+				+0.8
4,741,377	+				+0.5
4,741,377	+				+1.0
4,741,378	-				+0.2
4,741,386	+				+1.3
4,741,386	+				-0.8
4,741,396	+				-1.0
4,741,397	-				+0.2
4,741,397	-				+0.2
4,741,397	-				+0.0
4,741,442	+				-0.4
4,741,442	+				-1.3
4,741,442	+				+1.2
4,741,443	-				+1.1
4,741,443	-				-0.6
4,741,505	+				-0.5
4,741,505	+				-0.3
4,741,505	+				+1.4
4,741,505	+				+0.1
4,741,505	+				-0.1
4,741,505	+				-2.8
4,741,505	+				-1.3
4,741,505	+				+1.2
4,741,505	+				+1.8
4,741,505	+				+0.4
4,741,505	+				-0.1
4,741,505	+				+0.8
4,741,505	+				-0.6
4,741,505	+				+1.6
4,741,506	-				+0.2
4,741,506	-				+1.7
4,741,506	-				-0.8
4,741,506	-				+2.0
4,741,506	-				-0.4
4,741,506	-				-0.2
4,741,506	-				-0.0
4,741,506	-				+0.0
4,741,506	-				+0.5
4,741,506	-				+0.5
4,741,506	-				-0.8
4,741,506	-				+0.0
4,741,524	+				-0.4
4,741,524	+				+0.8
4,741,525	-				+1.6
4,741,528	+				+1.3
4,741,529	-				+0.5
4,741,529	-				+0.1
4,741,537	-				+1.0
4,741,537	-				+0.7
4,741,575	-				-0.9
4,741,575	-				-0.1
4,741,575	-				+0.4
4,741,580	+				+0.2
4,741,581	-				+1.4
4,741,663	+				-1.3
4,741,664	-				+0.0
4,741,664	-				-1.2
4,741,681	+				+0.2
4,741,696	-				+0.6
4,741,728	-				-0.5
4,741,742	+				+1.0
4,741,755	+				-0.3
4,741,756	-				+1.7
4,741,756	-				-0.6
4,741,815	-				-0.1
4,741,897	-				-0.6
4,741,897	-				+3.2
4,741,897	-				-0.2
4,741,901	+				-0.2
4,741,905	+				-0.1
4,741,906	-				+1.6
4,741,906	-				+0.5
4,741,911	-				+1.6
4,741,911	-				+1.8
4,741,913	+				-0.7
4,741,913	+				+0.8
4,741,913	+				-1.2
4,741,914	-				-0.2
4,741,914	-				-0.0
4,741,936	+				-1.5
4,741,951	-				-1.8
4,742,008	+				+0.8
4,742,008	+				+1.4
4,742,008	+				-0.2
4,742,008	+				-0.7
4,742,008	+				-1.8
4,742,008	+				-0.4
4,742,008	+				+0.2
4,742,008	+				+0.8
4,742,009	-				+1.1
4,742,009	-				+2.0
4,742,009	-				+0.8
4,742,009	-				+0.2
4,742,012	+				+1.2
4,742,012	+				-0.1
4,742,013	-				-0.2
4,742,013	-				+0.8
4,742,013	-				+2.4
4,742,013	-				+0.8
4,742,024	-				+0.8
4,742,045	+				-0.3
4,742,045	+				+3.6
4,742,046	-				+0.5
4,742,047	+				-0.9
4,742,129	+				+0.1
4,742,185	+		DZA65_RS21925	0.10	+0.6
4,742,185	+		DZA65_RS21925	0.10	+0.3
4,742,185	+		DZA65_RS21925	0.10	+0.4
4,742,185	+		DZA65_RS21925	0.10	-0.3
4,742,186	-		DZA65_RS21925	0.10	+2.8
4,742,186	-		DZA65_RS21925	0.10	+0.5
4,742,208	+		DZA65_RS21925	0.12	+0.4
4,742,208	+		DZA65_RS21925	0.12	-0.3
4,742,208	+		DZA65_RS21925	0.12	+0.5
4,742,212	+		DZA65_RS21925	0.12	+0.8
4,742,212	+		DZA65_RS21925	0.12	-0.1
4,742,213	-		DZA65_RS21925	0.12	+0.6
4,742,243	+		DZA65_RS21925	0.14	-0.3
4,742,271	+		DZA65_RS21925	0.17	-0.4
4,742,271	+		DZA65_RS21925	0.17	+0.4
4,742,285	+		DZA65_RS21925	0.18	+1.8
4,742,285	+		DZA65_RS21925	0.18	-1.5
4,742,352	+		DZA65_RS21925	0.23	+0.1
4,742,352	+		DZA65_RS21925	0.23	+0.8
4,742,353	-		DZA65_RS21925	0.23	+0.3
4,742,353	-		DZA65_RS21925	0.23	+2.2
4,742,422	-				+1.6
4,742,453	+		DZA65_RS21925	0.30	-0.3
4,742,580	+		DZA65_RS21925	0.40	+0.7
4,742,580	+		DZA65_RS21925	0.40	+1.0
4,742,580	+		DZA65_RS21925	0.40	+0.7
4,742,580	+		DZA65_RS21925	0.40	+0.2
4,742,581	-		DZA65_RS21925	0.40	-0.5
4,742,581	-		DZA65_RS21925	0.40	+0.6
4,742,581	-		DZA65_RS21925	0.40	-0.2
4,742,581	-		DZA65_RS21925	0.40	-2.3
4,742,637	-		DZA65_RS21925	0.44	+0.5
4,742,658	+		DZA65_RS21925	0.45	+0.0
4,742,691	+		DZA65_RS21925	0.48	+0.4
4,742,691	+		DZA65_RS21925	0.48	-1.5
4,742,691	+		DZA65_RS21925	0.48	-1.2
4,742,691	+		DZA65_RS21925	0.48	-0.8
4,742,691	+		DZA65_RS21925	0.48	+1.8
4,742,691	+		DZA65_RS21925	0.48	-0.5
4,742,691	+		DZA65_RS21925	0.48	-0.5
4,742,692	-		DZA65_RS21925	0.48	-0.2
4,742,692	-		DZA65_RS21925	0.48	+0.8
4,742,692	-		DZA65_RS21925	0.48	-1.0
4,742,692	-		DZA65_RS21925	0.48	-0.4
4,742,692	-		DZA65_RS21925	0.48	-0.5
4,742,692	-		DZA65_RS21925	0.48	-1.0
4,742,692	-		DZA65_RS21925	0.48	-0.3
4,742,692	-		DZA65_RS21925	0.48	-2.2
4,742,692	-		DZA65_RS21925	0.48	+0.8
4,742,692	-		DZA65_RS21925	0.48	+2.6
4,742,945	+		DZA65_RS21925	0.67	-0.7
4,742,945	+		DZA65_RS21925	0.67	+0.8
4,742,945	+		DZA65_RS21925	0.67	-0.5
4,742,945	+		DZA65_RS21925	0.67	+0.8
4,742,946	-		DZA65_RS21925	0.67	-0.5
4,742,946	-		DZA65_RS21925	0.67	+1.0
4,742,946	-		DZA65_RS21925	0.67	-0.5
4,742,992	-		DZA65_RS21925	0.70	-0.8
4,743,003	-		DZA65_RS21925	0.71	+1.8
4,743,039	+		DZA65_RS21925	0.74	+0.2
4,743,039	+		DZA65_RS21925	0.74	+0.1
4,743,039	+		DZA65_RS21925	0.74	+0.8
4,743,039	+		DZA65_RS21925	0.74	-0.8
4,743,039	+		DZA65_RS21925	0.74	+0.8
4,743,096	+		DZA65_RS21925	0.78	+0.3
4,743,096	+				-1.5
4,743,096	+		DZA65_RS21925	0.78	+0.5
4,743,096	+		DZA65_RS21925	0.78	+0.3
4,743,096	+		DZA65_RS21925	0.78	+1.6
4,743,096	+		DZA65_RS21925	0.78	+0.1
4,743,096	+		DZA65_RS21925	0.78	-1.2
4,743,096	+		DZA65_RS21925	0.78	+0.9
4,743,097	-		DZA65_RS21925	0.78	-0.1
4,743,097	-		DZA65_RS21925	0.78	+0.8
4,743,097	-		DZA65_RS21925	0.78	-0.5
4,743,097	-		DZA65_RS21925	0.78	-0.2
4,743,097	-		DZA65_RS21925	0.78	-0.1
4,743,097	-		DZA65_RS21925	0.78	+0.2
4,743,097	-		DZA65_RS21925	0.78	-0.2
4,743,097	-		DZA65_RS21925	0.78	-1.9
4,743,202	-		DZA65_RS21925	0.86	+0.2
4,743,202	-		DZA65_RS21925	0.86	+0.2
4,743,202	-		DZA65_RS21925	0.86	-0.8
4,743,202	-		DZA65_RS21925	0.86	+0.6
4,743,213	+		DZA65_RS21925	0.87	-0.2
4,743,213	+		DZA65_RS21925	0.87	+0.4
4,743,213	+		DZA65_RS21925	0.87	+1.3
4,743,213	+		DZA65_RS21925	0.87	-1.3
4,743,213	+		DZA65_RS21925	0.87	-0.2
4,743,213	+		DZA65_RS21925	0.87	+0.2
4,743,214	-		DZA65_RS21925	0.87	+0.6
4,743,214	-		DZA65_RS21925	0.87	+1.2
4,743,299	+				+2.3
4,743,299	+				-0.3
4,743,299	+				+0.8
4,743,299	+				-1.2
4,743,299	+				+0.8
4,743,299	+				-0.4
4,743,300	-				-0.4
4,743,300	-				-0.2
4,743,390	+				-2.6
4,743,390	+				-1.0
4,743,409	+				+0.2
4,743,409	+				-0.3
4,743,410	-				-0.3
4,743,410	-				-0.8
4,743,448	+				-1.0
4,743,449	-				+1.8
4,743,498	+				+1.0
4,743,507	+				-0.1
4,743,540	-				-0.5
4,743,552	+				-0.2
4,743,552	+				+0.8
4,743,552	+				+0.4
4,743,553	-				-0.7
4,743,553	-				-0.3
4,743,576	+				+1.8
4,743,576	+		DZA65_RS21930	0.11	+0.2
4,743,616	-		DZA65_RS21930	0.16	-2.1
4,743,624	+		DZA65_RS21930	0.18	-0.4
4,743,624	+		DZA65_RS21930	0.18	-0.2
4,743,912	+		DZA65_RS21930	0.57	+1.3
4,743,912	+		DZA65_RS21930	0.57	-1.2
4,743,912	+		DZA65_RS21930	0.57	-1.1
4,743,913	-				-0.8
4,743,913	-		DZA65_RS21930	0.58	-0.2
4,743,913	-		DZA65_RS21930	0.58	+0.6
4,743,927	+		DZA65_RS21930	0.59	-0.2
4,743,927	+		DZA65_RS21930	0.59	+0.0
4,743,928	-		DZA65_RS21930	0.60	+0.4
4,743,928	-		DZA65_RS21930	0.60	-0.1
4,743,928	-		DZA65_RS21930	0.60	-0.5
4,743,949	+		DZA65_RS21930	0.63	+0.0
4,743,949	+		DZA65_RS21930	0.63	+1.6
4,743,949	+		DZA65_RS21930	0.63	-2.0
4,743,949	+		DZA65_RS21930	0.63	-0.5
4,743,949	+		DZA65_RS21930	0.63	-0.5
4,743,950	-		DZA65_RS21930	0.63	-0.9
4,743,950	-		DZA65_RS21930	0.63	+0.3
4,743,950	-		DZA65_RS21930	0.63	-1.8
4,743,950	-		DZA65_RS21930	0.63	+1.8
4,743,950	-		DZA65_RS21930	0.63	-0.5
4,743,950	-		DZA65_RS21930	0.63	-0.2
4,743,950	-		DZA65_RS21930	0.63	-1.6
4,743,950	-		DZA65_RS21930	0.63	+1.4
4,743,950	-		DZA65_RS21930	0.63	+0.1
4,743,950	-		DZA65_RS21930	0.63	-1.5
4,743,951	+		DZA65_RS21930	0.63	+1.1
4,743,951	+		DZA65_RS21930	0.63	-1.8
4,743,951	+		DZA65_RS21930	0.63	+0.3
4,743,951	+		DZA65_RS21930	0.63	+0.4
4,743,951	+		DZA65_RS21930	0.63	-0.5
4,743,951	+		DZA65_RS21930	0.63	+0.0
4,743,951	+		DZA65_RS21930	0.63	-0.5
4,743,951	+		DZA65_RS21930	0.63	-1.2
4,743,951	+		DZA65_RS21930	0.63	+0.2
4,743,951	+		DZA65_RS21930	0.63	+0.1
4,743,952	-		DZA65_RS21930	0.63	+0.1
4,743,952	-		DZA65_RS21930	0.63	-0.5
4,743,952	-				+0.8
4,743,952	-		DZA65_RS21930	0.63	+0.4
4,743,952	-		DZA65_RS21930	0.63	-0.2
4,743,952	-		DZA65_RS21930	0.63	+0.8
4,743,952	-		DZA65_RS21930	0.63	-0.5
4,743,952	-		DZA65_RS21930	0.63	+0.2
4,743,952	-		DZA65_RS21930	0.63	-1.6
4,744,047	+		DZA65_RS21930	0.76	+1.4
4,744,047	+		DZA65_RS21930	0.76	+0.4
4,744,047	+		DZA65_RS21930	0.76	-1.0
4,744,047	+		DZA65_RS21930	0.76	+0.1
4,744,047	+		DZA65_RS21930	0.76	-0.0
4,744,047	+		DZA65_RS21930	0.76	-0.8
4,744,047	+		DZA65_RS21930	0.76	+0.6
4,744,047	+		DZA65_RS21930	0.76	-1.3
4,744,047	+		DZA65_RS21930	0.76	-1.4
4,744,047	+		DZA65_RS21930	0.76	-0.7
4,744,047	+		DZA65_RS21930	0.76	+0.1
4,744,047	+		DZA65_RS21930	0.76	-0.0
4,744,048	-		DZA65_RS21930	0.76	+0.8
4,744,048	-		DZA65_RS21930	0.76	-0.1
4,744,048	-				+0.4
4,744,048	-		DZA65_RS21930	0.76	-3.2
4,744,048	-		DZA65_RS21930	0.76	-1.2
4,744,048	-		DZA65_RS21930	0.76	-1.0
4,744,048	-		DZA65_RS21930	0.76	+0.8
4,744,048	-		DZA65_RS21930	0.76	+0.5
4,744,048	-		DZA65_RS21930	0.76	-0.8
4,744,048	-		DZA65_RS21930	0.76	-0.4
4,744,048	-		DZA65_RS21930	0.76	+2.0
4,744,048	-		DZA65_RS21930	0.76	-2.2
4,744,139	-		DZA65_RS21930	0.89	-1.0
4,744,139	-		DZA65_RS21930	0.89	+1.2
4,744,161	+				+0.1
4,744,168	+				+0.7
4,744,168	+				-0.1
4,744,168	+				-0.8
4,744,168	+				+0.7
4,744,168	+				+0.4
4,744,168	+				-3.0
4,744,168	+				-0.4
4,744,169	-				-0.5
4,744,169	-				+0.2
4,744,169	-				+1.0
4,744,169	-				+0.8
4,744,169	-				-1.0
4,744,169	-				-0.4
4,744,204	+				+0.6
4,744,204	+				-0.0
4,744,204	+				-1.8
4,744,205	-				-3.1
4,744,205	-				-0.5
4,744,205	-				-0.2
4,744,205	-				-3.3
4,744,208	+				+0.8
4,744,208	+				-1.3
4,744,208	+				-0.2
4,744,208	+				-0.4
4,744,208	+				+0.5
4,744,208	+				-0.2
4,744,209	-				-0.3
4,744,209	-				+0.4
4,744,209	-				-1.2
4,744,214	+				-1.1
4,744,214	+				+1.2
4,744,214	+				+0.8
4,744,214	+				+0.5
4,744,214	+				+0.5
4,744,214	+				-3.4
4,744,214	+				-0.1
4,744,214	+				+0.8
4,744,214	+				-1.4
4,744,215	-				-0.2
4,744,215	-				-0.9
4,744,215	-				+1.4
4,744,215	-				-1.5
4,744,215	-				+0.0
4,744,215	-				+0.1
4,744,215	-				-0.3
4,744,215	-				+0.8
4,744,215	-				+0.4
4,744,215	-				-1.3
4,744,233	+				+0.2
4,744,234	-				+1.8
4,744,234	-				-0.3
4,744,287	+				-0.6
4,744,287	+				-1.8
4,744,287	+				-0.9
4,744,287	+				-0.0
4,744,287	+				-0.0
4,744,288	-				+0.7
4,744,288	-				-0.2
4,744,288	-				+1.3
4,744,288	-				+0.2
4,744,288	-				-0.8
4,744,288	-				-3.9
4,744,288	-				-1.7
4,744,354	-				-0.2
4,744,354	-				-0.2
4,744,354	-				-1.4
4,744,354	-				-0.6