Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15060

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
3,286,056	+		DZA65_RS15055	0.62	-1.8
3,286,056	+		DZA65_RS15055	0.62	-0.8
3,286,057	-		DZA65_RS15055	0.62	-0.4
3,286,111	+		DZA65_RS15055	0.64	-0.1
3,286,156	-		DZA65_RS15055	0.66	+0.2
3,286,166	+		DZA65_RS15055	0.67	-1.0
3,286,167	-		DZA65_RS15055	0.67	+1.2
3,286,294	+		DZA65_RS15055	0.73	-0.8
3,286,323	+		DZA65_RS15055	0.74	-0.2
3,286,323	+		DZA65_RS15055	0.74	-1.0
3,286,323	+		DZA65_RS15055	0.74	+0.8
3,286,323	+		DZA65_RS15055	0.74	-1.4
3,286,324	-		DZA65_RS15055	0.74	+1.0
3,286,324	-		DZA65_RS15055	0.74	+1.0
3,286,324	-		DZA65_RS15055	0.74	-1.6
3,286,324	-		DZA65_RS15055	0.74	-0.4
3,286,356	+		DZA65_RS15055	0.75	-0.5
3,286,356	+		DZA65_RS15055	0.75	+0.6
3,286,379	+		DZA65_RS15055	0.76	-0.6
3,286,379	+				+1.2
3,286,379	+		DZA65_RS15055	0.76	-0.9
3,286,379	+		DZA65_RS15055	0.76	+0.6
3,286,379	+		DZA65_RS15055	0.76	-1.6
3,286,379	+				+1.2
3,286,379	+		DZA65_RS15055	0.76	+0.6
3,286,380	-		DZA65_RS15055	0.77	+0.0
3,286,380	-		DZA65_RS15055	0.77	-1.4
3,286,380	-		DZA65_RS15055	0.77	-1.6
3,286,385	+		DZA65_RS15055	0.77	+0.3
3,286,414	+		DZA65_RS15055	0.78	-1.2
3,286,414	+		DZA65_RS15055	0.78	-0.4
3,286,415	-		DZA65_RS15055	0.78	-0.9
3,286,415	-		DZA65_RS15055	0.78	-0.9
3,286,415	-				-0.4
3,286,415	-		DZA65_RS15055	0.78	-1.0
3,286,415	-		DZA65_RS15055	0.78	-0.8
3,286,431	+		DZA65_RS15055	0.79	-0.4
3,286,432	-		DZA65_RS15055	0.79	-0.4
3,286,491	+		DZA65_RS15055	0.82	+0.4
3,286,491	+		DZA65_RS15055	0.82	-1.2
3,286,491	+		DZA65_RS15055	0.82	+0.2
3,286,492	-		DZA65_RS15055	0.82	+0.2
3,286,492	-		DZA65_RS15055	0.82	+0.7
3,286,492	-		DZA65_RS15055	0.82	+0.6
3,286,492	-		DZA65_RS15055	0.82	-0.8
3,286,613	+		DZA65_RS15055	0.87	-0.3
3,286,613	+		DZA65_RS15055	0.87	-0.6
3,286,614	-		DZA65_RS15055	0.87	-3.4
3,286,614	-		DZA65_RS15055	0.87	+0.5
3,286,614	-		DZA65_RS15055	0.87	-0.2
3,286,633	+		DZA65_RS15055	0.88	-1.3
3,286,633	+		DZA65_RS15055	0.88	-0.4
3,286,645	+		DZA65_RS15055	0.89	+0.9
3,286,645	+		DZA65_RS15055	0.89	+0.9
3,286,645	+		DZA65_RS15055	0.89	-0.4
3,286,645	+		DZA65_RS15055	0.89	+1.0
3,286,646	-		DZA65_RS15055	0.89	+0.5
3,286,646	-		DZA65_RS15055	0.89	-0.9
3,286,646	-		DZA65_RS15055	0.89	+0.4
3,286,646	-		DZA65_RS15055	0.89	+0.5
3,286,711	+				-0.6
3,286,803	+				+0.1
3,286,803	+				-0.5
3,286,804	-				-1.6
3,286,894	+				-0.8
3,286,894	+				-1.1
3,286,894	+				-0.2
3,286,894	+				-0.5
3,286,894	+				-0.6
3,286,894	+				-0.2
3,286,894	+				+0.3
3,286,894	+				-2.1
3,286,894	+				+0.4
3,286,894	+				-0.1
3,286,895	-				-0.4
3,286,895	-				+0.4
3,286,895	-				+2.2
3,286,895	-				-0.3
3,286,895	-				-2.2
3,286,895	-				-2.1
3,286,931	+		DZA65_RS22945	0.27	-1.8
3,286,931	+		DZA65_RS22945	0.27	+0.1
3,286,931	+		DZA65_RS22945	0.27	-0.8
3,286,931	+		DZA65_RS22945	0.27	+1.0
3,286,932	-		DZA65_RS22945	0.28	-0.9
3,286,932	-		DZA65_RS22945	0.28	+1.4
3,286,932	-		DZA65_RS22945	0.28	-0.5
3,286,932	-		DZA65_RS22945	0.28	-0.5
3,286,932	-		DZA65_RS22945	0.28	-0.2
3,286,932	-		DZA65_RS22945	0.28	+0.0
3,286,932	-		DZA65_RS22945	0.28	-0.4
3,286,932	-		DZA65_RS22945	0.28	+1.5
3,286,934	+		DZA65_RS22945	0.29	-0.4
3,286,934	+		DZA65_RS22945	0.29	-0.3
3,287,041	-				-0.5
3,287,041	-				+0.4
3,287,041	-				+0.2
3,287,237	+		DZA65_RS15060	0.53	+0.4
3,287,238	-		DZA65_RS15060	0.53	-0.9
3,287,262	+		DZA65_RS15060	0.59	+1.0
3,287,262	+		DZA65_RS15060	0.59	-1.8
3,287,263	-		DZA65_RS15060	0.60	-1.5
3,287,263	-		DZA65_RS15060	0.60	-0.2
3,287,263	-		DZA65_RS15060	0.60	-1.4
3,287,263	-		DZA65_RS15060	0.60	+0.8
3,287,402	+				+0.7
3,287,403	-				+0.6
3,287,403	-				+0.6
3,287,417	+				+1.1
3,287,417	+				+0.5
3,287,418	-				-2.6
3,287,418	-				-0.4
3,287,480	+		DZA65_RS15065	0.17	+1.2
3,287,480	+		DZA65_RS15065	0.17	-0.5
3,287,481	-		DZA65_RS15065	0.17	-0.5
3,287,514	+		DZA65_RS15065	0.26	+0.6
3,287,514	+		DZA65_RS15065	0.26	+0.6
3,287,515	-		DZA65_RS15065	0.26	-1.4
3,287,515	-		DZA65_RS15065	0.26	-0.2
3,287,515	-		DZA65_RS15065	0.26	-0.8
3,287,516	+		DZA65_RS15065	0.26	+0.6
3,287,516	+		DZA65_RS15065	0.26	-0.8
3,287,516	+		DZA65_RS15065	0.26	-0.4
3,287,516	+		DZA65_RS15065	0.26	+0.1
3,287,516	+		DZA65_RS15065	0.26	-1.4
3,287,516	+		DZA65_RS15065	0.26	+0.2
3,287,516	+		DZA65_RS15065	0.26	-0.8
3,287,516	+		DZA65_RS15065	0.26	-1.1
3,287,516	+		DZA65_RS15065	0.26	-2.8
3,287,516	+		DZA65_RS15065	0.26	-0.2
3,287,516	+		DZA65_RS15065	0.26	+0.3
3,287,516	+		DZA65_RS15065	0.26	+1.8
3,287,516	+		DZA65_RS15065	0.26	-1.4
3,287,516	+		DZA65_RS15065	0.26	-0.6
3,287,516	+		DZA65_RS15065	0.26	-0.3
3,287,516	+		DZA65_RS15065	0.26	-0.2
3,287,516	+		DZA65_RS15065	0.26	-1.6
3,287,516	+		DZA65_RS15065	0.26	-0.2
3,287,516	+		DZA65_RS15065	0.26	-1.9
3,287,516	+		DZA65_RS15065	0.26	-0.6
3,287,517	-		DZA65_RS15065	0.27	+0.6
3,287,517	-		DZA65_RS15065	0.27	-1.4
3,287,517	-		DZA65_RS15065	0.27	+0.3
3,287,517	-		DZA65_RS15065	0.27	+0.2
3,287,517	-		DZA65_RS15065	0.27	+0.2
3,287,517	-		DZA65_RS15065	0.27	+0.2
3,287,517	-		DZA65_RS15065	0.27	+0.1
3,287,517	-		DZA65_RS15065	0.27	-0.8
3,287,517	-		DZA65_RS15065	0.27	+0.2
3,287,517	-		DZA65_RS15065	0.27	+0.1
3,287,517	-		DZA65_RS15065	0.27	-0.4
3,287,517	-		DZA65_RS15065	0.27	+0.7
3,287,517	-		DZA65_RS15065	0.27	-1.8
3,287,517	-		DZA65_RS15065	0.27	-0.8
3,287,517	-		DZA65_RS15065	0.27	+0.1
3,287,517	-		DZA65_RS15065	0.27	-0.8
3,287,517	-		DZA65_RS15065	0.27	+0.0
3,287,517	-		DZA65_RS15065	0.27	+1.8
3,287,517	-		DZA65_RS15065	0.27	-1.6
3,287,517	-		DZA65_RS15065	0.27	-0.2
3,287,517	-		DZA65_RS15065	0.27	-1.8
3,287,517	-		DZA65_RS15065	0.27	-0.6
3,287,517	-		DZA65_RS15065	0.27	-0.5
3,287,517	-		DZA65_RS15065	0.27	+0.4
3,287,517	-		DZA65_RS15065	0.27	-0.8
3,287,553	-		DZA65_RS15065	0.36	+0.1
3,287,610	+		DZA65_RS15065	0.51	+0.1
3,287,610	+		DZA65_RS15065	0.51	-0.9
3,287,611	-		DZA65_RS15065	0.52	-0.1
3,287,611	-		DZA65_RS15065	0.52	-1.8
3,287,614	+		DZA65_RS15065	0.52	-1.0
3,287,615	-		DZA65_RS15065	0.53	-0.6
3,287,633	+		DZA65_RS15065	0.57	+0.6
3,287,633	+		DZA65_RS15065	0.57	-0.2
3,287,633	+		DZA65_RS15065	0.57	-1.0
3,287,731	-		DZA65_RS15065	0.83	+1.2
3,287,777	+				-0.4
3,287,777	+				-0.3
3,287,777	+				+0.6
3,287,777	+				+0.2
3,287,778	-				-0.8
3,287,778	-				+0.7
3,287,778	-				+2.8
3,287,778	-				-0.1
3,287,788	-				-0.1
3,287,812	-				-0.8
3,287,812	-				-1.2
3,287,893	+				-2.2
3,287,893	+				+0.2
3,287,893	+				-0.8
3,287,893	+				+1.0
3,287,893	+				-1.0
3,287,894	-				+1.8
3,287,973	+		DZA65_RS15070	0.11	+0.2
3,287,973	+		DZA65_RS15070	0.11	+0.1
3,287,974	-		DZA65_RS15070	0.12	-0.9
3,287,987	+		DZA65_RS15070	0.12	+0.2
3,288,078	+		DZA65_RS15070	0.19	-0.5
3,288,078	+		DZA65_RS15070	0.19	+0.6
3,288,078	+		DZA65_RS15070	0.19	-1.1
3,288,078	+		DZA65_RS15070	0.19	-0.3
3,288,079	-		DZA65_RS15070	0.19	+0.6
3,288,079	-		DZA65_RS15070	0.19	+0.1
3,288,079	-		DZA65_RS15070	0.19	-0.5
3,288,079	-		DZA65_RS15070	0.19	-0.5
3,288,079	-		DZA65_RS15070	0.19	+0.8
3,288,079	-		DZA65_RS15070	0.19	-1.0
3,288,079	-		DZA65_RS15070	0.19	-1.2
3,288,145	+		DZA65_RS15070	0.24	+0.1
3,288,145	+		DZA65_RS15070	0.24	-0.6
3,288,145	+		DZA65_RS15070	0.24	+0.5
3,288,145	+		DZA65_RS15070	0.24	+0.4
3,288,145	+		DZA65_RS15070	0.24	+0.1
3,288,145	+		DZA65_RS15070	0.24	-0.6
3,288,145	+		DZA65_RS15070	0.24	-0.3
3,288,145	+		DZA65_RS15070	0.24	-0.3
3,288,145	+		DZA65_RS15070	0.24	+1.0
3,288,145	+		DZA65_RS15070	0.24	-1.9
3,288,145	+		DZA65_RS15070	0.24	-0.6
3,288,145	+		DZA65_RS15070	0.24	-0.5
3,288,145	+		DZA65_RS15070	0.24	+1.0
3,288,146	-		DZA65_RS15070	0.24	-0.6
3,288,146	-		DZA65_RS15070	0.24	+0.6
3,288,146	-		DZA65_RS15070	0.24	+0.2
3,288,146	-		DZA65_RS15070	0.24	+0.0
3,288,146	-		DZA65_RS15070	0.24	-1.2
3,288,146	-		DZA65_RS15070	0.24	-0.3
3,288,146	-		DZA65_RS15070	0.24	+0.4
3,288,146	-		DZA65_RS15070	0.24	-1.0
3,288,146	-				+0.2
3,288,146	-		DZA65_RS15070	0.24	+0.1
3,288,146	-		DZA65_RS15070	0.24	-0.7
3,288,147	+		DZA65_RS15070	0.24	+1.0
3,288,147	+		DZA65_RS15070	0.24	+1.0
3,288,147	+		DZA65_RS15070	0.24	-0.4
3,288,147	+		DZA65_RS15070	0.24	-0.4
3,288,147	+		DZA65_RS15070	0.24	-0.5
3,288,147	+		DZA65_RS15070	0.24	+0.6
3,288,147	+		DZA65_RS15070	0.24	+0.8
3,288,147	+		DZA65_RS15070	0.24	+0.9
3,288,147	+		DZA65_RS15070	0.24	-0.7
3,288,147	+		DZA65_RS15070	0.24	+2.0
3,288,147	+		DZA65_RS15070	0.24	+0.4
3,288,147	+		DZA65_RS15070	0.24	+0.5
3,288,147	+		DZA65_RS15070	0.24	-1.6
3,288,147	+		DZA65_RS15070	0.24	+0.1
3,288,147	+		DZA65_RS15070	0.24	-0.7
3,288,147	+		DZA65_RS15070	0.24	-0.8
3,288,147	+		DZA65_RS15070	0.24	-0.2
3,288,147	+		DZA65_RS15070	0.24	-0.0
3,288,147	+		DZA65_RS15070	0.24	-0.4
3,288,147	+		DZA65_RS15070	0.24	-0.2
3,288,147	+		DZA65_RS15070	0.24	+0.9
3,288,148	-		DZA65_RS15070	0.24	-0.8
3,288,148	-		DZA65_RS15070	0.24	-0.6
3,288,148	-		DZA65_RS15070	0.24	+0.7
3,288,148	-		DZA65_RS15070	0.24	-1.4
3,288,148	-		DZA65_RS15070	0.24	+2.0
3,288,148	-		DZA65_RS15070	0.24	+0.8
3,288,148	-		DZA65_RS15070	0.24	+0.0
3,288,148	-		DZA65_RS15070	0.24	-0.1
3,288,148	-		DZA65_RS15070	0.24	+0.9
3,288,148	-		DZA65_RS15070	0.24	-0.6
3,288,148	-				+2.4
3,288,148	-		DZA65_RS15070	0.24	-1.8
3,288,151	+		DZA65_RS15070	0.24	-0.2
3,288,151	+		DZA65_RS15070	0.24	-0.8
3,288,151	+		DZA65_RS15070	0.24	+0.5
3,288,151	+		DZA65_RS15070	0.24	+0.7
3,288,151	+		DZA65_RS15070	0.24	-3.1
3,288,151	+		DZA65_RS15070	0.24	-1.1
3,288,151	+		DZA65_RS15070	0.24	-0.2
3,288,151	+		DZA65_RS15070	0.24	-0.6
3,288,151	+		DZA65_RS15070	0.24	-0.2
3,288,151	+		DZA65_RS15070	0.24	-0.1
3,288,151	+		DZA65_RS15070	0.24	+0.2
3,288,151	+		DZA65_RS15070	0.24	+0.2
3,288,151	+		DZA65_RS15070	0.24	+0.2
3,288,151	+		DZA65_RS15070	0.24	-0.2
3,288,152	-		DZA65_RS15070	0.24	+1.0
3,288,152	-		DZA65_RS15070	0.24	+0.5
3,288,152	-		DZA65_RS15070	0.24	-0.0
3,288,152	-		DZA65_RS15070	0.24	+1.5
3,288,152	-		DZA65_RS15070	0.24	+0.3
3,288,152	-		DZA65_RS15070	0.24	+1.2
3,288,152	-		DZA65_RS15070	0.24	+0.4
3,288,152	-		DZA65_RS15070	0.24	-1.8
3,288,152	-		DZA65_RS15070	0.24	-0.4
3,288,152	-		DZA65_RS15070	0.24	-0.0
3,288,152	-		DZA65_RS15070	0.24	+0.2
3,288,168	-		DZA65_RS15070	0.25	+0.5
3,288,216	+		DZA65_RS15070	0.29	+0.2
3,288,216	+		DZA65_RS15070	0.29	+0.1
3,288,216	+		DZA65_RS15070	0.29	-0.1
3,288,216	+		DZA65_RS15070	0.29	+0.2
3,288,216	+		DZA65_RS15070	0.29	-2.6
3,288,216	+		DZA65_RS15070	0.29	+0.6
3,288,216	+		DZA65_RS15070	0.29	-0.4
3,288,216	+		DZA65_RS15070	0.29	+0.2
3,288,217	-		DZA65_RS15070	0.29	+0.0
3,288,217	-		DZA65_RS15070	0.29	-0.8
3,288,217	-		DZA65_RS15070	0.29	+0.4
3,288,217	-		DZA65_RS15070	0.29	+0.6
3,288,217	-		DZA65_RS15070	0.29	-0.8
3,288,217	-		DZA65_RS15070	0.29	+0.2
3,288,217	-		DZA65_RS15070	0.29	-0.6
3,288,217	-		DZA65_RS15070	0.29	+1.2
3,288,217	-		DZA65_RS15070	0.29	-0.9
3,288,219	-		DZA65_RS15070	0.29	+0.2
3,288,364	+		DZA65_RS15070	0.39	+0.0