Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09755

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
2,057,386	+		DZA65_RS09750	0.40	-0.9
2,057,454	-		DZA65_RS09750	0.48	-0.4
2,057,467	+		DZA65_RS09750	0.50	+0.5
2,057,468	-		DZA65_RS09750	0.50	-0.4
2,057,468	-		DZA65_RS09750	0.50	+0.5
2,057,468	-		DZA65_RS09750	0.50	-0.4
2,057,561	-		DZA65_RS09750	0.62	-0.5
2,057,686	-		DZA65_RS09750	0.78	+0.5
2,057,853	+				+0.1
2,057,853	+				+1.0
2,057,853	+				+0.1
2,057,853	+				+0.1
2,057,853	+				+0.1
2,057,853	+				-0.5
2,057,854	-				-0.8
2,057,854	-				+0.0
2,057,854	-				-0.5
2,057,854	-				-0.2
2,057,864	+				-1.7
2,057,906	+				+1.1
2,057,906	+				-0.4
2,057,906	+				+0.6
2,057,906	+				+1.2
2,057,906	+				+0.4
2,057,906	+				-0.5
2,057,906	+				-1.5
2,057,906	+				-0.1
2,057,906	+				+0.4
2,057,906	+				+0.1
2,057,906	+				-0.4
2,057,907	-				-1.5
2,057,907	-				-1.5
2,057,907	-				-1.3
2,057,909	+				-1.1
2,057,909	+				+0.4
2,057,909	+				-0.6
2,057,909	+				+0.8
2,057,910	-				-0.2
2,057,910	-				-2.3
2,057,910	-				+0.6
2,057,951	-				+0.9
2,057,993	-				+0.5
2,057,993	-				-1.2
2,057,993	-				+0.5
2,058,025	+				-0.4
2,058,030	+				-1.3
2,058,030	+				-0.0
2,058,030	+				+0.1
2,058,031	-				-0.7
2,058,073	+				-0.3
2,058,074	-				+0.3
2,058,074	-				+1.1
2,058,074	-				+0.6
2,058,074	-				-0.2
2,058,076	-				-0.1
2,058,093	+				+0.3
2,058,093	+				+1.5
2,058,093	+				+1.1
2,058,093	+				+0.1
2,058,094	-				-1.3
2,058,106	+				+0.3
2,058,107	-				+0.3
2,058,111	+				-1.2
2,058,111	+				-0.2
2,058,111	+				+2.1
2,058,112	-				-0.2
2,058,112	-				-0.4
2,058,116	-				+1.1
2,058,124	-				-0.4
2,058,124	-				-1.8
2,058,124	-				-0.1
2,058,168	+				-0.5
2,058,168	+				+0.3
2,058,185	+				+0.4
2,058,195	+				-0.5
2,058,290	+				-1.0
2,058,291	-				-0.7
2,058,302	+				+0.8
2,058,302	+				+0.3
2,058,303	-				-0.7
2,058,372	+				+0.5
2,058,386	+				-0.6
2,058,436	+				-0.4
2,058,436	+				+1.2
2,058,436	+				-0.1
2,058,436	+				+2.0
2,058,436	+				-0.8
2,058,436	+				-0.8
2,058,436	+				+1.2
2,058,436	+				+0.4
2,058,436	+				+0.6
2,058,437	-				+0.4
2,058,437	-				-0.3
2,058,437	-				-0.9
2,058,437	-				+0.4
2,058,437	-				+0.5
2,058,437	-				-0.8
2,058,437	-				+1.3
2,058,437	-				-1.3
2,058,437	-				-2.3
2,058,437	-				-0.4
2,058,437	-				-0.9
2,058,437	-				-2.5
2,058,437	-				-0.2
2,058,489	+				+0.1
2,058,490	-				+0.1
2,058,561	+		DZA65_RS09755	0.12	+0.8
2,058,561	+		DZA65_RS09755	0.12	+0.1
2,058,561	+		DZA65_RS09755	0.12	+0.9
2,058,562	-		DZA65_RS09755	0.12	-0.0
2,058,562	-		DZA65_RS09755	0.12	-0.5
2,058,562	-		DZA65_RS09755	0.12	-0.1
2,058,562	-		DZA65_RS09755	0.12	+0.3
2,058,562	-		DZA65_RS09755	0.12	+0.8
2,058,562	-		DZA65_RS09755	0.12	-0.9
2,058,562	-		DZA65_RS09755	0.12	+0.1
2,058,562	-		DZA65_RS09755	0.12	-0.1
2,058,565	+		DZA65_RS09755	0.12	-0.6
2,058,565	+				+0.5
2,058,565	+		DZA65_RS09755	0.12	-2.9
2,058,611	+		DZA65_RS09755	0.15	+0.1
2,058,639	+		DZA65_RS09755	0.16	+0.4
2,058,639	+		DZA65_RS09755	0.16	-0.1
2,058,640	-		DZA65_RS09755	0.16	-0.3
2,058,726	-		DZA65_RS09755	0.22	+0.1
2,058,726	-		DZA65_RS09755	0.22	-0.7
2,058,748	+		DZA65_RS09755	0.23	+1.1
2,058,749	-		DZA65_RS09755	0.23	-2.8
2,058,749	-		DZA65_RS09755	0.23	+0.6
2,058,925	+		DZA65_RS09755	0.33	-0.0
2,058,925	+		DZA65_RS09755	0.33	-1.3
2,058,925	+		DZA65_RS09755	0.33	+0.8
2,058,925	+		DZA65_RS09755	0.33	-2.1
2,058,925	+		DZA65_RS09755	0.33	+0.3
2,058,926	-		DZA65_RS09755	0.33	+0.7
2,058,931	+		DZA65_RS09755	0.34	-0.0
2,058,931	+		DZA65_RS09755	0.34	+0.1
2,058,931	+		DZA65_RS09755	0.34	+0.7
2,058,932	-		DZA65_RS09755	0.34	+1.1
2,058,932	-		DZA65_RS09755	0.34	-0.4
2,059,153	+		DZA65_RS09755	0.47	+2.9
2,059,175	+		DZA65_RS09755	0.48	-0.7
2,059,175	+		DZA65_RS09755	0.48	+0.9
2,059,175	+		DZA65_RS09755	0.48	+1.0
2,059,175	+		DZA65_RS09755	0.48	-1.1
2,059,176	-		DZA65_RS09755	0.48	+0.1
2,059,176	-		DZA65_RS09755	0.48	-0.7
2,059,317	+		DZA65_RS09755	0.57	-0.2
2,059,317	+		DZA65_RS09755	0.57	+0.7
2,059,318	-		DZA65_RS09755	0.57	-0.8
2,059,318	-		DZA65_RS09755	0.57	+0.2
2,059,335	+		DZA65_RS09755	0.58	+0.7
2,059,339	+		DZA65_RS09755	0.58	+0.9
2,059,339	+		DZA65_RS09755	0.58	+1.1
2,059,411	+		DZA65_RS09755	0.62	-0.0
2,059,411	+		DZA65_RS09755	0.62	-0.5
2,059,419	+		DZA65_RS09755	0.63	-0.3
2,059,419	+		DZA65_RS09755	0.63	+0.5
2,059,420	-		DZA65_RS09755	0.63	-0.7
2,059,420	-		DZA65_RS09755	0.63	+0.7
2,059,420	-		DZA65_RS09755	0.63	+0.3
2,059,420	-		DZA65_RS09755	0.63	-1.3
2,059,420	-		DZA65_RS09755	0.63	+0.6
2,059,420	-		DZA65_RS09755	0.63	+0.2
2,059,499	+		DZA65_RS09755	0.67	+0.4
2,059,499	+		DZA65_RS09755	0.67	+1.6
2,059,499	+		DZA65_RS09755	0.67	-0.5
2,059,500	-		DZA65_RS09755	0.67	+0.6
2,059,551	+		DZA65_RS09755	0.70	-0.1
2,059,551	+		DZA65_RS09755	0.70	+0.8
2,059,551	+		DZA65_RS09755	0.70	-0.8
2,059,552	-		DZA65_RS09755	0.70	-0.5
2,059,552	-		DZA65_RS09755	0.70	-0.3
2,059,552	-		DZA65_RS09755	0.70	-0.4
2,059,552	-		DZA65_RS09755	0.70	-0.2
2,059,552	-		DZA65_RS09755	0.70	+1.1
2,059,712	+		DZA65_RS09755	0.80	-1.2
2,059,712	+		DZA65_RS09755	0.80	-1.9
2,059,713	-		DZA65_RS09755	0.80	+0.2
2,059,776	+				-0.7
2,059,777	-		DZA65_RS09755	0.84	-0.6
2,059,843	+		DZA65_RS09755	0.88	+0.9
2,059,931	-				-0.4
2,059,982	+				+0.1
2,059,982	+				+0.9
2,059,983	-				+0.1
2,060,013	+				+0.6
2,060,013	+				+0.5
2,060,025	-				-0.3
2,060,043	-				+0.6
2,060,043	-				-0.1
2,060,043	-				-0.8
2,060,044	+				-0.3
2,060,045	-				-0.1
2,060,045	-				-0.5
2,060,278	+		DZA65_RS09760	0.72	-0.7
2,060,279	-		DZA65_RS09760	0.73	-0.6
2,060,329	-				-0.1
2,060,378	-				+1.4
2,060,450	-		DZA65_RS09765	0.14	-0.4
2,060,450	-		DZA65_RS09765	0.14	-1.5
2,060,463	+		DZA65_RS09765	0.18	+0.1
2,060,464	-		DZA65_RS09765	0.18	-0.7
2,060,524	+		DZA65_RS09765	0.34	+0.4
2,060,561	+		DZA65_RS09765	0.44	+1.6
2,060,561	+		DZA65_RS09765	0.44	-0.4
2,060,561	+		DZA65_RS09765	0.44	+0.3
2,060,562	-		DZA65_RS09765	0.44	-0.9
2,060,588	+		DZA65_RS09765	0.51	+0.4
2,060,588	+		DZA65_RS09765	0.51	+0.6
2,060,599	-		DZA65_RS09765	0.54	+0.9
2,060,684	+		DZA65_RS09765	0.77	-0.1
2,060,684	+		DZA65_RS09765	0.77	-0.5
2,060,684	+		DZA65_RS09765	0.77	-0.0
2,060,684	+		DZA65_RS09765	0.77	-0.8
2,060,684	+		DZA65_RS09765	0.77	-1.5
2,060,684	+		DZA65_RS09765	0.77	+0.1
2,060,684	+		DZA65_RS09765	0.77	+0.3
2,060,684	+		DZA65_RS09765	0.77	-0.8
2,060,684	+		DZA65_RS09765	0.77	-1.3
2,060,684	+		DZA65_RS09765	0.77	-0.9
2,060,685	-		DZA65_RS09765	0.77	-0.6
2,060,685	-		DZA65_RS09765	0.77	-0.5
2,060,685	-		DZA65_RS09765	0.77	-1.5
2,060,685	-		DZA65_RS09765	0.77	-0.4
2,060,685	-		DZA65_RS09765	0.77	+0.5
2,060,685	-		DZA65_RS09765	0.77	+1.0
2,060,685	-		DZA65_RS09765	0.77	-0.2
2,060,700	+		DZA65_RS09765	0.81	-0.0
2,060,769	-				+0.1
2,060,769	-				-0.4
2,060,785	-				-0.4
2,060,872	+				+0.9
2,060,872	+				-0.0
2,060,945	+		DZA65_RS09770	0.38	-0.2
2,060,945	+		DZA65_RS09770	0.38	+0.8
2,060,949	+		DZA65_RS09770	0.40	-0.6
2,060,950	-		DZA65_RS09770	0.40	+0.1
2,060,961	+		DZA65_RS09770	0.44	+1.2
2,061,001	+		DZA65_RS09770	0.60	-0.5
2,061,001	+		DZA65_RS09770	0.60	+0.4
2,061,001	+		DZA65_RS09770	0.60	-0.1
2,061,002	-		DZA65_RS09770	0.60	-0.0
2,061,002	-		DZA65_RS09770	0.60	-0.4
2,061,007	+		DZA65_RS09770	0.62	+0.4
2,061,008	-		DZA65_RS09770	0.62	+0.3
2,061,008	-		DZA65_RS09770	0.62	+0.8