Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20725

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
4,471,422	+		DZA65_RS20715	0.49	+0.6
4,471,422	+		DZA65_RS20715	0.49	-0.5
4,471,422	+		DZA65_RS20715	0.49	+0.1
4,471,471	+		DZA65_RS20715	0.53	+0.6
4,471,472	-		DZA65_RS20715	0.53	+0.5
4,471,491	+		DZA65_RS20715	0.55	+0.1
4,471,492	-		DZA65_RS20715	0.55	-0.9
4,471,543	+		DZA65_RS20715	0.59	-1.4
4,471,543	+		DZA65_RS20715	0.59	-0.2
4,471,543	+		DZA65_RS20715	0.59	+0.6
4,471,543	+		DZA65_RS20715	0.59	+0.3
4,471,543	+		DZA65_RS20715	0.59	+1.1
4,471,544	-		DZA65_RS20715	0.59	+0.4
4,471,544	-		DZA65_RS20715	0.59	-0.3
4,471,648	+		DZA65_RS20715	0.67	-0.8
4,471,648	+		DZA65_RS20715	0.67	+0.5
4,471,648	+		DZA65_RS20715	0.67	+0.3
4,471,648	+		DZA65_RS20715	0.67	+2.3
4,471,648	+		DZA65_RS20715	0.67	-0.4
4,471,648	+		DZA65_RS20715	0.67	+0.2
4,471,648	+		DZA65_RS20715	0.67	-0.5
4,471,648	+		DZA65_RS20715	0.67	+1.5
4,471,648	+		DZA65_RS20715	0.67	-0.7
4,471,648	+		DZA65_RS20715	0.67	-0.5
4,471,648	+		DZA65_RS20715	0.67	-2.1
4,471,648	+		DZA65_RS20715	0.67	-1.5
4,471,649	-		DZA65_RS20715	0.67	+1.3
4,471,649	-		DZA65_RS20715	0.67	+1.1
4,471,649	-		DZA65_RS20715	0.67	-2.5
4,471,649	-		DZA65_RS20715	0.67	-0.8
4,471,649	-		DZA65_RS20715	0.67	+0.1
4,471,662	+		DZA65_RS20715	0.68	+0.3
4,471,663	-		DZA65_RS20715	0.68	-2.2
4,471,663	-		DZA65_RS20715	0.68	+0.3
4,471,665	+		DZA65_RS20715	0.68	+0.5
4,471,666	-		DZA65_RS20715	0.68	+0.3
4,471,666	-		DZA65_RS20715	0.68	-0.7
4,472,062	+				-0.0
4,472,075	+				+0.5
4,472,075	+				-0.3
4,472,075	+				+0.5
4,472,076	-				+0.1
4,472,086	-				+0.2
4,472,086	-				+0.9
4,472,086	-				-0.3
4,472,086	-				+1.1
4,472,096	+				+1.2
4,472,096	+				-0.1
4,472,096	+				-0.0
4,472,096	+				-0.3
4,472,096	+				-0.1
4,472,096	+				+0.1
4,472,096	+				-1.5
4,472,096	+				-0.4
4,472,096	+				+0.3
4,472,097	-				-0.1
4,472,097	-				-0.3
4,472,117	+				-0.8
4,472,117	+				+0.7
4,472,117	+				-0.2
4,472,118	-				+1.1
4,472,118	-				-0.9
4,472,118	-				+0.1
4,472,127	+				-0.3
4,472,138	+				+0.6
4,472,138	+				-0.6
4,472,138	+				-0.3
4,472,138	+				-1.4
4,472,138	+				-0.1
4,472,138	+				+0.3
4,472,139	-				-2.5
4,472,139	-				+1.7
4,472,160	-				-1.5
4,472,160	-				-0.1
4,472,160	-				-0.7
4,472,160	-				+0.5
4,472,160	-				+0.1
4,472,180	+				-0.9
4,472,180	+				+0.3
4,472,180	+				-0.3
4,472,181	-				-0.3
4,472,181	-				-1.0
4,472,181	-				+0.5
4,472,191	-				-0.5
4,472,191	-				+1.2
4,472,191	-				+1.1
4,472,202	-				-0.8
4,472,202	-				-0.3
4,472,211	+				-0.7
4,472,215	+				+0.7
4,472,215	+				+1.5
4,472,215	+				-0.1
4,472,216	-				+0.8
4,472,216	-				+0.1
4,472,274	+				-1.3
4,472,274	+				+0.3
4,472,274	+				-0.8
4,472,275	-				-0.7
4,472,275	-				-1.2
4,472,426	+				+0.2
4,472,487	-		DZA65_RS20725	0.12	-0.6
4,472,487	-		DZA65_RS20725	0.12	-1.9
4,472,654	+		DZA65_RS20725	0.41	-1.1
4,472,655	-		DZA65_RS20725	0.41	-1.6
4,472,732	+		DZA65_RS20725	0.55	-2.1
4,472,732	+		DZA65_RS20725	0.55	-1.0
4,472,732	+		DZA65_RS20725	0.55	-0.4
4,472,732	+		DZA65_RS20725	0.55	-0.3
4,472,732	+		DZA65_RS20725	0.55	+0.2
4,472,733	-		DZA65_RS20725	0.55	-0.7
4,472,733	-		DZA65_RS20725	0.55	+0.7
4,472,733	-		DZA65_RS20725	0.55	+0.7
4,472,800	+		DZA65_RS20725	0.67	-0.2
4,472,818	+		DZA65_RS20725	0.70	-0.4
4,472,818	+		DZA65_RS20725	0.70	-2.3
4,472,818	+		DZA65_RS20725	0.70	-0.8
4,472,818	+		DZA65_RS20725	0.70	+0.1
4,472,818	+		DZA65_RS20725	0.70	-0.4
4,472,818	+		DZA65_RS20725	0.70	-0.9
4,472,818	+		DZA65_RS20725	0.70	+0.1
4,472,819	-		DZA65_RS20725	0.70	-0.3
4,472,819	-		DZA65_RS20725	0.70	-0.2
4,472,819	-		DZA65_RS20725	0.70	+0.5
4,472,819	-		DZA65_RS20725	0.70	-0.4
4,472,819	-		DZA65_RS20725	0.70	-1.0
4,472,819	-		DZA65_RS20725	0.70	-1.1
4,472,819	-		DZA65_RS20725	0.70	-0.4
4,472,819	-		DZA65_RS20725	0.70	-0.8
4,472,956	-				-0.8
4,472,961	+				-2.1
4,472,964	+				+0.5
4,472,964	+				-0.4
4,472,964	+				-0.3
4,472,965	-				-0.3
4,472,965	-				-0.5
4,472,976	+				-0.5
4,472,977	-				+0.7
4,472,977	-				+1.4
4,472,977	-				+1.5
4,472,978	+				-3.1
4,472,978	+				-2.4
4,472,978	+				-0.7
4,472,978	+				-0.5
4,472,978	+				+0.5
4,472,978	+				+0.8
4,472,979	-				-0.5
4,472,979	-				+1.8
4,472,979	-				-1.3
4,472,979	-				+0.6
4,472,979	-				-0.4
4,472,979	-				-0.7
4,472,979	-				-2.2
4,472,979	-				-0.6
4,472,979	-				+0.3
4,473,026	+				-2.5
4,473,027	-				-0.5
4,473,039	+				+1.1
4,473,040	-				+1.0
4,473,066	+				+0.8
4,473,066	+				-0.2
4,473,067	-				-0.8
4,473,076	+				+0.5
4,473,115	+				-0.5
4,473,115	+				-2.8
4,473,115	+				-0.5
4,473,116	-				+0.7
4,473,116	-				+0.6
4,473,116	-				-0.6
4,473,127	+				+1.2
4,473,128	-				-0.1
4,473,128	-				-0.9
4,473,136	+				-1.2
4,473,136	+				-3.1
4,473,136	+				-0.7
4,473,137	-				+0.1
4,473,137	-				+0.2
4,473,138	+				+0.0
4,473,138	+				-0.2
4,473,138	+				+1.3
4,473,138	+				-0.3
4,473,138	+				+2.3
4,473,139	-				+0.2
4,473,139	-				-1.1
4,473,139	-				+0.0
4,473,139	-				-0.9
4,473,199	-				-2.8
4,473,254	-				-0.2
4,473,254	-				+0.8
4,473,254	-				+1.1
4,473,254	-				+0.9
4,473,254	-				+0.4
4,473,254	-				+0.2
4,473,254	-				-1.1
4,473,254	-				+0.2
4,473,254	-				-1.5
4,473,278	-				+0.3
4,473,278	-				-1.7
4,473,278	-				+0.2