Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18495

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
3,984,931	+		DZA65_RS18490	0.34	-0.3
3,984,931	+		DZA65_RS18490	0.34	-0.2
3,984,931	+		DZA65_RS18490	0.34	-0.9
3,984,931	+		DZA65_RS18490	0.34	-1.4
3,984,932	-		DZA65_RS18490	0.35	-0.2
3,984,932	-		DZA65_RS18490	0.35	-0.4
3,984,932	-		DZA65_RS18490	0.35	-2.3
3,984,932	-		DZA65_RS18490	0.35	+0.4
3,985,007	+		DZA65_RS18490	0.40	-1.6
3,985,007	+		DZA65_RS18490	0.40	+0.0
3,985,008	-				+0.8
3,985,008	-		DZA65_RS18490	0.40	-1.7
3,985,008	-		DZA65_RS18490	0.40	+0.2
3,985,008	-		DZA65_RS18490	0.40	-0.1
3,985,008	-		DZA65_RS18490	0.40	+0.9
3,985,016	+		DZA65_RS18490	0.40	-1.2
3,985,017	-		DZA65_RS18490	0.40	+0.0
3,985,018	+		DZA65_RS18490	0.40	-1.3
3,985,019	-		DZA65_RS18490	0.40	-1.7
3,985,019	-		DZA65_RS18490	0.40	-0.6
3,985,027	+		DZA65_RS18490	0.41	+0.1
3,985,045	-		DZA65_RS18490	0.42	-0.2
3,985,045	-		DZA65_RS18490	0.42	+2.0
3,985,045	-		DZA65_RS18490	0.42	-0.1
3,985,045	-		DZA65_RS18490	0.42	-0.7
3,985,059	+		DZA65_RS18490	0.43	-0.7
3,985,060	-		DZA65_RS18490	0.43	+0.4
3,985,168	-		DZA65_RS18490	0.50	+0.1
3,985,228	+		DZA65_RS18490	0.54	-1.2
3,985,228	+		DZA65_RS18490	0.54	+0.2
3,985,228	+		DZA65_RS18490	0.54	-1.1
3,985,228	+		DZA65_RS18490	0.54	+0.8
3,985,228	+		DZA65_RS18490	0.54	+0.1
3,985,228	+		DZA65_RS18490	0.54	-1.6
3,985,229	-		DZA65_RS18490	0.54	-0.6
3,985,229	-		DZA65_RS18490	0.54	+1.4
3,985,229	-		DZA65_RS18490	0.54	-0.2
3,985,232	+		DZA65_RS18490	0.55	+0.9
3,985,232	+		DZA65_RS18490	0.55	-0.8
3,985,232	+		DZA65_RS18490	0.55	+0.6
3,985,233	-		DZA65_RS18490	0.55	+0.4
3,985,233	-		DZA65_RS18490	0.55	+0.5
3,985,233	-		DZA65_RS18490	0.55	+0.1
3,985,233	-		DZA65_RS18490	0.55	-0.9
3,985,233	-		DZA65_RS18490	0.55	-0.7
3,985,282	+		DZA65_RS18490	0.58	-1.3
3,985,282	+		DZA65_RS18490	0.58	-0.2
3,985,282	+		DZA65_RS18490	0.58	-0.8
3,985,282	+		DZA65_RS18490	0.58	+0.1
3,985,282	+		DZA65_RS18490	0.58	-1.3
3,985,282	+		DZA65_RS18490	0.58	-1.7
3,985,282	+		DZA65_RS18490	0.58	+0.4
3,985,282	+		DZA65_RS18490	0.58	-1.2
3,985,282	+		DZA65_RS18490	0.58	+0.5
3,985,282	+		DZA65_RS18490	0.58	-0.5
3,985,282	+		DZA65_RS18490	0.58	+0.1
3,985,282	+		DZA65_RS18490	0.58	-0.3
3,985,282	+		DZA65_RS18490	0.58	-0.5
3,985,282	+		DZA65_RS18490	0.58	+0.4
3,985,283	-		DZA65_RS18490	0.58	-0.4
3,985,283	-		DZA65_RS18490	0.58	+0.4
3,985,283	-		DZA65_RS18490	0.58	+0.0
3,985,283	-		DZA65_RS18490	0.58	-0.6
3,985,283	-		DZA65_RS18490	0.58	-1.9
3,985,283	-		DZA65_RS18490	0.58	-0.2
3,985,283	-		DZA65_RS18490	0.58	+1.1
3,985,283	-		DZA65_RS18490	0.58	+0.7
3,985,283	-		DZA65_RS18490	0.58	-0.7
3,985,283	-		DZA65_RS18490	0.58	+0.5
3,985,283	-		DZA65_RS18490	0.58	-2.4
3,985,283	-		DZA65_RS18490	0.58	-1.2
3,985,283	-		DZA65_RS18490	0.58	-0.1
3,985,283	-		DZA65_RS18490	0.58	-0.4
3,985,283	-		DZA65_RS18490	0.58	+0.6
3,985,283	-		DZA65_RS18490	0.58	+0.1
3,985,283	-		DZA65_RS18490	0.58	+0.2
3,985,283	-		DZA65_RS18490	0.58	+1.0
3,985,327	+		DZA65_RS18490	0.61	-0.8
3,985,328	-				-0.2
3,985,346	-		DZA65_RS18490	0.62	-0.2
3,985,378	+		DZA65_RS18490	0.64	-0.1
3,985,379	-		DZA65_RS18490	0.65	-1.0
3,985,445	-		DZA65_RS18490	0.69	+0.8
3,985,475	+		DZA65_RS18490	0.71	+0.0
3,985,475	+		DZA65_RS18490	0.71	-0.4
3,985,475	+		DZA65_RS18490	0.71	-0.2
3,985,476	-		DZA65_RS18490	0.71	+1.2
3,985,507	+		DZA65_RS18490	0.73	+0.1
3,985,630	+		DZA65_RS18490	0.81	-0.4
3,985,630	+		DZA65_RS18490	0.81	+0.6
3,985,630	+		DZA65_RS18490	0.81	-0.1
3,985,630	+		DZA65_RS18490	0.81	+0.8
3,985,630	+		DZA65_RS18490	0.81	+1.0
3,985,631	-		DZA65_RS18490	0.81	+0.6
3,985,631	-		DZA65_RS18490	0.81	-1.0
3,985,631	-		DZA65_RS18490	0.81	+0.9
3,985,631	-		DZA65_RS18490	0.81	-0.7
3,985,631	-		DZA65_RS18490	0.81	+0.9
3,985,631	-		DZA65_RS18490	0.81	+0.3
3,985,639	+		DZA65_RS18490	0.82	-0.3
3,985,639	+		DZA65_RS18490	0.82	-0.6
3,985,639	+		DZA65_RS18490	0.82	+0.4
3,985,640	-		DZA65_RS18490	0.82	-1.3
3,985,670	-		DZA65_RS18490	0.84	-0.2
3,985,670	-		DZA65_RS18490	0.84	+0.4
3,985,718	+		DZA65_RS18490	0.87	-0.2
3,985,719	-		DZA65_RS18490	0.87	-0.6
3,985,719	-		DZA65_RS18490	0.87	+1.4
3,985,719	-		DZA65_RS18490	0.87	+0.2
3,985,769	+				-0.7
3,985,769	+				+0.9
3,985,769	+				+0.3
3,985,769	+				-0.2
3,985,769	+				+1.6
3,985,769	+				+0.6
3,985,770	-				-1.2
3,985,771	+				+1.0
3,985,771	+				-0.7
3,985,771	+				-1.2
3,985,771	+				-0.4
3,985,771	+				+0.5
3,985,771	+				+0.4
3,985,771	+				+2.9
3,985,771	+				-2.0
3,985,772	-				-1.2
3,985,772	-				-2.7
3,985,772	-				-0.3
3,985,772	-				+0.1
3,985,772	-				-0.1
3,985,772	-				+0.7
3,985,772	-				-0.3
3,985,900	-				+0.4
3,985,900	-				-1.6
3,985,991	+				-1.9
3,986,003	+				+0.8
3,986,004	-				+0.0
3,986,004	-				+0.1
3,986,023	+				+1.2
3,986,023	+				-0.3
3,986,023	+				+0.0
3,986,023	+				+2.4
3,986,024	-				-0.4
3,986,024	-				-0.6
3,986,105	-				+0.6
3,986,130	+		DZA65_RS18495	0.11	+0.8
3,986,130	+		DZA65_RS18495	0.11	-0.3
3,986,131	-		DZA65_RS18495	0.11	-0.4
3,986,286	+		DZA65_RS18495	0.19	+0.8
3,986,286	+		DZA65_RS18495	0.19	-0.3
3,986,286	+		DZA65_RS18495	0.19	-0.4
3,986,286	+		DZA65_RS18495	0.19	+0.4
3,986,287	-		DZA65_RS18495	0.19	-0.7
3,986,287	-		DZA65_RS18495	0.19	-1.2
3,986,287	-		DZA65_RS18495	0.19	-0.9
3,986,287	-		DZA65_RS18495	0.19	+1.2
3,986,287	-		DZA65_RS18495	0.19	+1.0
3,986,385	+		DZA65_RS18495	0.25	+1.9
3,986,531	+		DZA65_RS18495	0.32	+1.8
3,986,531	+		DZA65_RS18495	0.32	+0.7
3,986,591	+		DZA65_RS18495	0.35	-1.7
3,986,592	-		DZA65_RS18495	0.36	+0.2
3,986,676	+		DZA65_RS18495	0.40	+0.7
3,986,676	+		DZA65_RS18495	0.40	+0.4
3,986,676	+		DZA65_RS18495	0.40	-2.2
3,986,677	-		DZA65_RS18495	0.40	+0.3
3,986,687	+		DZA65_RS18495	0.41	-1.4
3,986,687	+		DZA65_RS18495	0.41	+1.0
3,986,687	+		DZA65_RS18495	0.41	+0.4
3,986,687	+		DZA65_RS18495	0.41	-0.9
3,986,687	+		DZA65_RS18495	0.41	-1.2
3,986,687	+				-1.2
3,986,687	+		DZA65_RS18495	0.41	+1.3
3,986,687	+		DZA65_RS18495	0.41	-1.9
3,986,687	+		DZA65_RS18495	0.41	+0.7
3,986,687	+		DZA65_RS18495	0.41	-0.6
3,986,688	-		DZA65_RS18495	0.41	+0.2
3,986,688	-		DZA65_RS18495	0.41	+0.9
3,986,688	-		DZA65_RS18495	0.41	+0.4
3,986,805	+		DZA65_RS18495	0.47	-0.2
3,986,806	-		DZA65_RS18495	0.47	+0.2
3,986,806	-		DZA65_RS18495	0.47	+1.4
3,986,816	+		DZA65_RS18495	0.47	+0.9
3,986,816	+		DZA65_RS18495	0.47	+1.4
3,986,816	+		DZA65_RS18495	0.47	-0.7
3,986,816	+		DZA65_RS18495	0.47	+0.4
3,986,816	+		DZA65_RS18495	0.47	-0.3
3,986,816	+		DZA65_RS18495	0.47	-1.4
3,986,816	+		DZA65_RS18495	0.47	+0.1
3,986,816	+		DZA65_RS18495	0.47	+0.6
3,986,816	+		DZA65_RS18495	0.47	-0.1
3,986,816	+		DZA65_RS18495	0.47	-2.9
3,986,817	-		DZA65_RS18495	0.47	+0.4
3,986,817	-		DZA65_RS18495	0.47	-1.0
3,986,817	-		DZA65_RS18495	0.47	+0.4
3,986,817	-		DZA65_RS18495	0.47	-0.9
3,986,824	+		DZA65_RS18495	0.48	+0.3
3,986,825	-		DZA65_RS18495	0.48	+0.3
3,986,825	-		DZA65_RS18495	0.48	+1.2
3,986,885	+		DZA65_RS18495	0.51	-0.2
3,986,885	+		DZA65_RS18495	0.51	-0.2
3,986,885	+		DZA65_RS18495	0.51	-0.1
3,986,885	+		DZA65_RS18495	0.51	-1.6
3,986,885	+		DZA65_RS18495	0.51	-0.0
3,986,885	+		DZA65_RS18495	0.51	-0.3
3,986,885	+		DZA65_RS18495	0.51	+0.0
3,986,885	+		DZA65_RS18495	0.51	+1.0
3,986,885	+		DZA65_RS18495	0.51	-1.9
3,986,885	+		DZA65_RS18495	0.51	+0.3
3,986,885	+		DZA65_RS18495	0.51	-0.3
3,986,885	+		DZA65_RS18495	0.51	-1.0
3,986,886	-		DZA65_RS18495	0.51	+1.3
3,986,886	-		DZA65_RS18495	0.51	-0.6
3,986,886	-		DZA65_RS18495	0.51	-0.1
3,986,886	-		DZA65_RS18495	0.51	+0.4
3,986,886	-		DZA65_RS18495	0.51	-1.3
3,986,886	-		DZA65_RS18495	0.51	-0.9
3,986,886	-		DZA65_RS18495	0.51	-1.0
3,986,886	-		DZA65_RS18495	0.51	-0.9
3,986,886	-		DZA65_RS18495	0.51	+1.4
3,986,886	-		DZA65_RS18495	0.51	+0.3
3,986,886	-		DZA65_RS18495	0.51	-1.4
3,986,886	-		DZA65_RS18495	0.51	+1.2
3,986,886	-		DZA65_RS18495	0.51	+0.8
3,986,946	+		DZA65_RS18495	0.54	-0.7
3,986,947	-		DZA65_RS18495	0.54	-0.1
3,986,952	+		DZA65_RS18495	0.55	-0.2
3,986,953	-		DZA65_RS18495	0.55	-1.2
3,986,953	-		DZA65_RS18495	0.55	+0.9
3,986,953	-		DZA65_RS18495	0.55	-1.2
3,986,953	-		DZA65_RS18495	0.55	-1.6
3,986,953	-		DZA65_RS18495	0.55	+0.7
3,986,953	-		DZA65_RS18495	0.55	-0.3
3,987,072	+		DZA65_RS18495	0.61	-0.9
3,987,072	+		DZA65_RS18495	0.61	+0.7
3,987,072	+		DZA65_RS18495	0.61	+1.1
3,987,072	+		DZA65_RS18495	0.61	-1.2
3,987,072	+		DZA65_RS18495	0.61	-0.4
3,987,073	-		DZA65_RS18495	0.61	+0.9
3,987,073	-		DZA65_RS18495	0.61	+0.4
3,987,167	+		DZA65_RS18495	0.66	+0.1
3,987,168	-		DZA65_RS18495	0.66	-0.4
3,987,168	-		DZA65_RS18495	0.66	-1.7
3,987,168	-		DZA65_RS18495	0.66	+0.4
3,987,201	+		DZA65_RS18495	0.68	-1.6
3,987,201	+		DZA65_RS18495	0.68	+0.0
3,987,202	-		DZA65_RS18495	0.68	+0.5
3,987,275	+		DZA65_RS18495	0.72	+1.3
3,987,275	+		DZA65_RS18495	0.72	+0.8
3,987,275	+		DZA65_RS18495	0.72	+1.0
3,987,275	+		DZA65_RS18495	0.72	-0.6
3,987,276	-		DZA65_RS18495	0.72	-1.7
3,987,276	-		DZA65_RS18495	0.72	-0.0
3,987,276	-		DZA65_RS18495	0.72	+1.0
3,987,276	-		DZA65_RS18495	0.72	+0.9
3,987,328	-		DZA65_RS18495	0.75	-0.3
3,987,328	-		DZA65_RS18495	0.75	-0.6
3,987,328	-		DZA65_RS18495	0.75	-1.3
3,987,332	+		DZA65_RS18495	0.75	-0.3
3,987,332	+		DZA65_RS18495	0.75	-0.2
3,987,333	-		DZA65_RS18495	0.75	-0.6
3,987,368	+		DZA65_RS18495	0.77	+0.5
3,987,368	+		DZA65_RS18495	0.77	+0.3
3,987,368	+		DZA65_RS18495	0.77	-1.2
3,987,368	+		DZA65_RS18495	0.77	+0.2
3,987,369	-		DZA65_RS18495	0.77	-1.9
3,987,369	-		DZA65_RS18495	0.77	+2.3
3,987,369	-		DZA65_RS18495	0.77	+0.1
3,987,369	-		DZA65_RS18495	0.77	+0.6
3,987,427	-		DZA65_RS18495	0.80	-0.2
3,987,569	-		DZA65_RS18495	0.87	+0.3
3,987,636	+				-0.7
3,987,639	+				-0.6
3,987,640	-				-1.6
3,987,655	+				+0.7
3,987,655	+				+0.2
3,987,655	+				-0.5
3,987,681	+				-0.9
3,987,681	+				+0.8
3,987,681	+				-0.3
3,987,702	-				-0.1
3,987,720	+				+0.8
3,987,720	+				+1.0
3,987,721	-				-0.1
3,987,721	-				+0.0
3,987,792	-				-2.5
3,987,795	+				+0.2
3,987,795	+				-0.4
3,987,795	+				+0.9
3,987,795	+				-0.2
3,987,796	-				-0.6
3,987,805	-				+0.1
3,987,862	+				+0.4
3,987,863	-				-1.2
3,987,863	-				-0.2
3,987,941	-				-0.6
3,987,986	-				+1.2
3,988,000	+				+0.0
3,988,000	+				-0.6
3,988,000	+				-2.4
3,988,000	+				-0.7
3,988,000	+				-1.2
3,988,001	-				-1.4
3,988,001	-				+0.7
3,988,001	-				+1.5
3,988,001	-				-0.6
3,988,010	-				-0.3
3,988,019	+				-0.2
3,988,020	-				+0.7
3,988,020	-				+0.4
3,988,075	+				+1.4
3,988,075	+		DZA65_RS18500	0.12	+0.1
3,988,075	+		DZA65_RS18500	0.12	+1.4
3,988,076	-		DZA65_RS18500	0.12	+0.0
3,988,076	-		DZA65_RS18500	0.12	-0.2
3,988,129	+		DZA65_RS18500	0.19	-0.9
3,988,130	-		DZA65_RS18500	0.19	+0.1
3,988,130	-		DZA65_RS18500	0.19	+1.1
3,988,133	+		DZA65_RS18500	0.19	-2.7
3,988,215	+		DZA65_RS18500	0.29	-0.5
3,988,225	+		DZA65_RS18500	0.30	+1.2
3,988,304	-		DZA65_RS18500	0.39	-2.2
3,988,351	+		DZA65_RS18500	0.45	+0.1
3,988,428	+		DZA65_RS18500	0.54	-0.3
3,988,428	+		DZA65_RS18500	0.54	-0.1
3,988,428	+		DZA65_RS18500	0.54	+0.2
3,988,429	-		DZA65_RS18500	0.54	-0.5
3,988,429	-		DZA65_RS18500	0.54	+0.8
3,988,441	-		DZA65_RS18500	0.56	-1.1
3,988,441	-		DZA65_RS18500	0.56	+0.1
3,988,502	+		DZA65_RS18500	0.63	+1.2
3,988,503	-		DZA65_RS18500	0.63	-1.0
3,988,536	+		DZA65_RS18500	0.67	-1.2
3,988,536	+		DZA65_RS18500	0.67	+0.0
3,988,536	+		DZA65_RS18500	0.67	+0.5
3,988,536	+		DZA65_RS18500	0.67	+0.9
3,988,537	-		DZA65_RS18500	0.67	+1.1
3,988,537	-		DZA65_RS18500	0.67	+0.8
3,988,537	-		DZA65_RS18500	0.67	-0.1
3,988,537	-		DZA65_RS18500	0.67	-0.6
3,988,537	-		DZA65_RS18500	0.67	+0.4
3,988,639	+		DZA65_RS18500	0.79	+0.6
3,988,640	-		DZA65_RS18500	0.79	-1.0
3,988,640	-		DZA65_RS18500	0.79	+0.2
3,988,640	-		DZA65_RS18500	0.79	-0.4
3,988,750	+				-1.2
3,988,751	-				+0.8
3,988,789	+				-0.7
3,988,789	+				+2.4
3,988,789	+				-0.8
3,988,790	-				+1.0
3,988,790	-				-1.9
3,988,790	-				+0.4
3,988,793	-				-0.1
3,988,793	-				-0.1
3,988,793	-				+0.4