Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18430

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
3,972,071	-		DZA65_RS18425	0.21	-0.7
3,972,291	+		DZA65_RS18425	0.39	-0.3
3,972,291	+		DZA65_RS18425	0.39	-1.2
3,972,291	+		DZA65_RS18425	0.39	-0.2
3,972,292	-		DZA65_RS18425	0.39	-0.4
3,972,292	-		DZA65_RS18425	0.39	+0.0
3,972,292	-				-2.2
3,972,426	+		DZA65_RS18425	0.50	-0.2
3,972,426	+		DZA65_RS18425	0.50	+2.5
3,972,426	+		DZA65_RS18425	0.50	-0.2
3,972,426	+		DZA65_RS18425	0.50	-0.3
3,972,426	+		DZA65_RS18425	0.50	-0.2
3,972,426	+		DZA65_RS18425	0.50	+1.4
3,972,426	+		DZA65_RS18425	0.50	-1.4
3,972,427	-		DZA65_RS18425	0.50	-0.1
3,972,427	-		DZA65_RS18425	0.50	-0.5
3,972,427	-		DZA65_RS18425	0.50	+0.9
3,972,427	-		DZA65_RS18425	0.50	+0.2
3,972,427	-				-1.2
3,972,545	+		DZA65_RS18425	0.59	-2.4
3,972,545	+		DZA65_RS18425	0.59	+0.8
3,972,545	+		DZA65_RS18425	0.59	+0.6
3,972,546	-		DZA65_RS18425	0.59	-0.6
3,972,546	-		DZA65_RS18425	0.59	+0.1
3,972,546	-		DZA65_RS18425	0.59	-0.4
3,972,546	-		DZA65_RS18425	0.59	+0.4
3,972,558	-		DZA65_RS18425	0.60	-1.4
3,972,558	-		DZA65_RS18425	0.60	-0.4
3,972,796	+		DZA65_RS18425	0.79	+0.4
3,972,796	+		DZA65_RS18425	0.79	+0.5
3,972,796	+		DZA65_RS18425	0.79	-0.6
3,972,796	+		DZA65_RS18425	0.79	+0.7
3,972,796	+		DZA65_RS18425	0.79	-2.4
3,972,796	+		DZA65_RS18425	0.79	-1.4
3,972,796	+		DZA65_RS18425	0.79	-1.4
3,972,796	+		DZA65_RS18425	0.79	-0.3
3,972,797	-		DZA65_RS18425	0.80	+0.4
3,972,797	-		DZA65_RS18425	0.80	-0.5
3,972,797	-		DZA65_RS18425	0.80	+0.2
3,972,797	-		DZA65_RS18425	0.80	-0.2
3,972,797	-		DZA65_RS18425	0.80	+1.2
3,972,797	-		DZA65_RS18425	0.80	-1.4
3,972,797	-		DZA65_RS18425	0.80	-1.9
3,972,825	+		DZA65_RS18425	0.82	-1.2
3,972,825	+		DZA65_RS18425	0.82	+0.4
3,972,825	+				+0.8
3,972,825	+		DZA65_RS18425	0.82	+0.6
3,972,826	-		DZA65_RS18425	0.82	+0.4
3,972,826	-		DZA65_RS18425	0.82	-0.5
3,972,826	-		DZA65_RS18425	0.82	+0.8
3,972,826	-		DZA65_RS18425	0.82	-0.2
3,972,923	-		DZA65_RS18425	0.90	-1.2
3,972,923	-		DZA65_RS18425	0.90	-0.7
3,972,923	-		DZA65_RS18425	0.90	-0.2
3,973,057	+				+1.9
3,973,110	+				-0.4
3,973,110	+				-1.2
3,973,111	-				+0.0
3,973,111	-				-0.2
3,973,570	+		DZA65_RS18430	0.51	-0.1
3,973,571	-		DZA65_RS18430	0.51	+1.0
3,973,571	-		DZA65_RS18430	0.51	+0.8
3,973,600	+		DZA65_RS18430	0.54	+0.1
3,973,600	+		DZA65_RS18430	0.54	+0.7
3,973,600	+		DZA65_RS18430	0.54	+0.4
3,973,601	-		DZA65_RS18430	0.54	-0.4
3,973,603	+		DZA65_RS18430	0.54	+0.9
3,973,603	+		DZA65_RS18430	0.54	-1.4
3,973,603	+		DZA65_RS18430	0.54	+0.8
3,973,603	+		DZA65_RS18430	0.54	+0.2
3,973,603	+		DZA65_RS18430	0.54	+1.4
3,973,603	+		DZA65_RS18430	0.54	+0.4
3,973,603	+		DZA65_RS18430	0.54	-0.6
3,973,603	+		DZA65_RS18430	0.54	+0.9
3,973,603	+		DZA65_RS18430	0.54	+0.7
3,973,603	+		DZA65_RS18430	0.54	+0.4
3,973,604	-		DZA65_RS18430	0.55	+0.2
3,973,604	-		DZA65_RS18430	0.55	-0.2
3,973,604	-		DZA65_RS18430	0.55	-0.0
3,973,604	-		DZA65_RS18430	0.55	+0.1
3,973,604	-		DZA65_RS18430	0.55	+0.4
3,973,604	-		DZA65_RS18430	0.55	-1.2
3,973,604	-		DZA65_RS18430	0.55	+0.0
3,973,604	-		DZA65_RS18430	0.55	+0.1
3,973,604	-		DZA65_RS18430	0.55	+0.8
3,973,604	-		DZA65_RS18430	0.55	-1.8
3,973,664	-		DZA65_RS18430	0.60	-0.8
3,973,939	+		DZA65_RS18430	0.87	-0.2
3,974,039	+				-0.6
3,974,039	+				+0.3
3,974,040	-				-0.3
3,974,040	-				+0.7
3,974,040	-				-1.0
3,974,040	-				-0.1
3,974,040	-				+1.2
3,974,044	+				-0.7
3,974,044	+				-0.0
3,974,044	+				+0.3
3,974,045	-				+0.2
3,974,045	-				-0.1
3,974,045	-				-0.5
3,974,092	+				+1.6
3,974,092	+				+1.3
3,974,092	+				+1.4
3,974,093	-				-0.8
3,974,113	+				+1.1
3,974,113	+				-0.6
3,974,113	+				-0.4
3,974,113	+				-0.2
3,974,113	+				+0.4
3,974,113	+				-0.6
3,974,114	-				-0.7
3,974,114	-				+1.3
3,974,114	-				+0.4
3,974,136	+				-1.3
3,974,137	-				+0.2
3,974,200	+		DZA65_RS18435	0.15	-2.6
3,974,200	+		DZA65_RS18435	0.15	+0.9
3,974,200	+		DZA65_RS18435	0.15	+1.0
3,974,201	-		DZA65_RS18435	0.15	-1.0
3,974,201	-		DZA65_RS18435	0.15	+0.0
3,974,201	-		DZA65_RS18435	0.15	-1.2
3,974,285	+		DZA65_RS18435	0.26	+1.1
3,974,286	-		DZA65_RS18435	0.26	-0.7
3,974,286	-		DZA65_RS18435	0.26	+0.4
3,974,286	-		DZA65_RS18435	0.26	+0.2
3,974,286	-		DZA65_RS18435	0.26	-1.7
3,974,286	-		DZA65_RS18435	0.26	+0.2
3,974,339	-		DZA65_RS18435	0.33	+1.6
3,974,339	-		DZA65_RS18435	0.33	-1.2
3,974,339	-		DZA65_RS18435	0.33	+1.2
3,974,380	+		DZA65_RS18435	0.39	+0.1
3,974,381	-		DZA65_RS18435	0.39	+0.7
3,974,381	-		DZA65_RS18435	0.39	-1.2
3,974,381	-		DZA65_RS18435	0.39	-2.6
3,974,506	+		DZA65_RS18435	0.56	-1.6
3,974,506	+		DZA65_RS18435	0.56	+0.2
3,974,652	+		DZA65_RS18435	0.76	-0.2
3,974,696	+		DZA65_RS18435	0.82	+1.4
3,974,726	-		DZA65_RS18435	0.86	+0.4
3,974,808	-				-1.2
3,974,825	+				+0.9
3,974,825	+				+0.2
3,974,825	+				+0.4
3,974,825	+				+1.3
3,974,826	-				+0.4
3,974,826	-				-0.9
3,974,826	-				-1.7
3,974,831	+				+0.0
3,974,877	+				-0.6
3,974,877	+				-1.9
3,974,878	-				+0.8