Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22050

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
4,766,456	-		DZA65_RS22045	0.13	-0.2
4,766,461	+		DZA65_RS22045	0.14	+0.2
4,766,494	+		DZA65_RS22045	0.17	-1.7
4,766,494	+		DZA65_RS22045	0.17	+0.5
4,766,494	+		DZA65_RS22045	0.17	-2.8
4,766,494	+		DZA65_RS22045	0.17	+0.5
4,766,495	-		DZA65_RS22045	0.17	-0.2
4,766,495	-		DZA65_RS22045	0.17	+1.1
4,766,503	+		DZA65_RS22045	0.18	+0.2
4,766,503	+		DZA65_RS22045	0.18	-1.1
4,766,503	+		DZA65_RS22045	0.18	-0.1
4,766,503	+		DZA65_RS22045	0.18	+0.8
4,766,503	+		DZA65_RS22045	0.18	-0.9
4,766,503	+		DZA65_RS22045	0.18	+0.2
4,766,503	+		DZA65_RS22045	0.18	+1.2
4,766,504	-		DZA65_RS22045	0.18	+1.1
4,766,504	-		DZA65_RS22045	0.18	+0.9
4,766,504	-		DZA65_RS22045	0.18	+0.1
4,766,504	-		DZA65_RS22045	0.18	-1.1
4,766,504	-		DZA65_RS22045	0.18	-0.6
4,766,504	-		DZA65_RS22045	0.18	-1.1
4,766,504	-		DZA65_RS22045	0.18	-1.8
4,766,504	-		DZA65_RS22045	0.18	+0.2
4,766,518	+		DZA65_RS22045	0.20	+0.5
4,766,518	+		DZA65_RS22045	0.20	+3.2
4,766,518	+		DZA65_RS22045	0.20	-1.7
4,766,519	-		DZA65_RS22045	0.20	-0.7
4,766,519	-		DZA65_RS22045	0.20	+0.5
4,766,519	-		DZA65_RS22045	0.20	+0.2
4,766,551	+		DZA65_RS22045	0.23	-0.7
4,766,551	+		DZA65_RS22045	0.23	+0.5
4,766,551	+		DZA65_RS22045	0.23	+0.5
4,766,551	+		DZA65_RS22045	0.23	-0.5
4,766,551	+		DZA65_RS22045	0.23	-0.9
4,766,551	+		DZA65_RS22045	0.23	-1.3
4,766,551	+		DZA65_RS22045	0.23	-0.6
4,766,551	+		DZA65_RS22045	0.23	-0.5
4,766,552	-		DZA65_RS22045	0.23	+1.2
4,766,552	-		DZA65_RS22045	0.23	+0.0
4,766,552	-		DZA65_RS22045	0.23	-0.5
4,766,552	-		DZA65_RS22045	0.23	-1.2
4,766,552	-		DZA65_RS22045	0.23	-1.5
4,766,552	-		DZA65_RS22045	0.23	-0.9
4,766,552	-		DZA65_RS22045	0.23	+0.2
4,766,552	-		DZA65_RS22045	0.23	-0.3
4,766,552	-		DZA65_RS22045	0.23	-1.0
4,766,552	-		DZA65_RS22045	0.23	+0.2
4,766,557	+		DZA65_RS22045	0.24	+1.2
4,766,557	+		DZA65_RS22045	0.24	-0.2
4,766,557	+		DZA65_RS22045	0.24	-1.4
4,766,557	+		DZA65_RS22045	0.24	+0.7
4,766,557	+		DZA65_RS22045	0.24	+1.8
4,766,557	+		DZA65_RS22045	0.24	+0.4
4,766,558	-		DZA65_RS22045	0.24	-0.5
4,766,558	-		DZA65_RS22045	0.24	+0.3
4,766,558	-		DZA65_RS22045	0.24	+0.5
4,766,558	-		DZA65_RS22045	0.24	-0.1
4,766,558	-		DZA65_RS22045	0.24	+0.2
4,766,584	+		DZA65_RS22045	0.27	-1.1
4,766,584	+		DZA65_RS22045	0.27	-0.2
4,766,585	-		DZA65_RS22045	0.27	-1.1
4,766,585	-		DZA65_RS22045	0.27	+0.6
4,766,614	-		DZA65_RS22045	0.30	-0.6
4,766,614	-		DZA65_RS22045	0.30	+0.5
4,766,769	+		DZA65_RS22045	0.47	+0.5
4,766,770	-		DZA65_RS22045	0.47	-0.7
4,766,770	-		DZA65_RS22045	0.47	-0.5
4,766,770	-		DZA65_RS22045	0.47	-1.8
4,766,795	+		DZA65_RS22045	0.50	-1.5
4,766,795	+		DZA65_RS22045	0.50	-0.0
4,766,884	+		DZA65_RS22045	0.60	-0.2
4,766,885	-		DZA65_RS22045	0.60	-2.5
4,766,885	-		DZA65_RS22045	0.60	+0.2
4,767,011	+		DZA65_RS22045	0.73	+0.9
4,767,022	+		DZA65_RS22045	0.75	+0.5
4,767,022	+		DZA65_RS22045	0.75	+0.1
4,767,022	+		DZA65_RS22045	0.75	-0.7
4,767,022	+		DZA65_RS22045	0.75	+0.8
4,767,022	+		DZA65_RS22045	0.75	+0.1
4,767,022	+		DZA65_RS22045	0.75	+0.5
4,767,022	+		DZA65_RS22045	0.75	-0.5
4,767,022	+		DZA65_RS22045	0.75	+0.2
4,767,022	+		DZA65_RS22045	0.75	+0.3
4,767,023	-		DZA65_RS22045	0.75	+0.3
4,767,023	-		DZA65_RS22045	0.75	+0.6
4,767,023	-		DZA65_RS22045	0.75	-0.7
4,767,023	-		DZA65_RS22045	0.75	-0.4
4,767,023	-		DZA65_RS22045	0.75	-1.2
4,767,023	-		DZA65_RS22045	0.75	+0.2
4,767,023	-		DZA65_RS22045	0.75	+1.3
4,767,105	+				+1.3
4,767,105	+		DZA65_RS22045	0.84	+0.7
4,767,105	+		DZA65_RS22045	0.84	+1.5
4,767,105	+		DZA65_RS22045	0.84	+0.5
4,767,105	+		DZA65_RS22045	0.84	-1.5
4,767,105	+		DZA65_RS22045	0.84	+0.7
4,767,105	+		DZA65_RS22045	0.84	-0.5
4,767,106	-		DZA65_RS22045	0.84	+0.3
4,767,106	-		DZA65_RS22045	0.84	+1.1
4,767,106	-		DZA65_RS22045	0.84	-0.7
4,767,106	-		DZA65_RS22045	0.84	-0.8
4,767,106	-		DZA65_RS22045	0.84	-1.1
4,767,106	-		DZA65_RS22045	0.84	-1.2
4,767,106	-		DZA65_RS22045	0.84	+1.2
4,767,254	+				-0.5
4,767,254	+				+0.9
4,767,255	-				+0.1
4,767,255	-				-1.1
4,767,499	+				-0.5
4,767,499	+				+1.7
4,767,499	+				-0.5
4,767,499	+				-2.3
4,767,500	-				-1.7
4,767,500	-				-0.9
4,767,501	+				+0.8
4,767,501	+				+0.3
4,767,502	-				-0.5
4,767,502	-				-0.4
4,767,585	+		DZA65_RS22050	0.16	+1.3
4,767,585	+		DZA65_RS22050	0.16	-1.1
4,767,585	+		DZA65_RS22050	0.16	-0.4
4,767,609	+		DZA65_RS22050	0.18	+1.6
4,767,609	+		DZA65_RS22050	0.18	-0.9
4,767,609	+		DZA65_RS22050	0.18	-0.9
4,767,610	-				+0.8
4,767,610	-		DZA65_RS22050	0.18	-0.7
4,767,610	-		DZA65_RS22050	0.18	-0.7
4,767,610	-		DZA65_RS22050	0.18	+0.2
4,767,628	-		DZA65_RS22050	0.19	-1.6
4,767,628	-		DZA65_RS22050	0.19	+0.7
4,767,654	+		DZA65_RS22050	0.21	+0.8
4,767,655	-		DZA65_RS22050	0.21	-1.5
4,767,655	-		DZA65_RS22050	0.21	+0.0
4,767,657	+		DZA65_RS22050	0.21	+1.1
4,767,657	+		DZA65_RS22050	0.21	-0.5
4,767,657	+		DZA65_RS22050	0.21	-0.5
4,767,702	+		DZA65_RS22050	0.24	-0.0
4,767,702	+		DZA65_RS22050	0.24	+0.9
4,767,702	+		DZA65_RS22050	0.24	-2.0
4,767,702	+		DZA65_RS22050	0.24	-0.1
4,767,703	-		DZA65_RS22050	0.24	-0.2
4,767,703	-		DZA65_RS22050	0.24	+1.1
4,767,807	+		DZA65_RS22050	0.32	+1.2
4,767,807	+		DZA65_RS22050	0.32	+1.0
4,767,807	+		DZA65_RS22050	0.32	-0.2
4,767,808	-		DZA65_RS22050	0.32	+0.9
4,767,808	-		DZA65_RS22050	0.32	+0.0
4,767,808	-		DZA65_RS22050	0.32	-1.7
4,767,844	+		DZA65_RS22050	0.35	+0.8
4,767,976	+		DZA65_RS22050	0.44	-1.1
4,767,976	+		DZA65_RS22050	0.44	+1.2
4,767,976	+		DZA65_RS22050	0.44	-0.5
4,767,977	-		DZA65_RS22050	0.44	-0.3
4,767,977	-		DZA65_RS22050	0.44	+0.3
4,767,984	+		DZA65_RS22050	0.45	-1.9
4,767,984	+		DZA65_RS22050	0.45	-1.2
4,768,083	+		DZA65_RS22050	0.52	-1.3
4,768,083	+		DZA65_RS22050	0.52	-3.5
4,768,084	-		DZA65_RS22050	0.52	-0.2
4,768,139	+		DZA65_RS22050	0.56	-0.7
4,768,139	+		DZA65_RS22050	0.56	-1.2
4,768,139	+		DZA65_RS22050	0.56	+0.2
4,768,139	+		DZA65_RS22050	0.56	-0.5
4,768,139	+		DZA65_RS22050	0.56	-1.8
4,768,139	+		DZA65_RS22050	0.56	-1.0
4,768,139	+		DZA65_RS22050	0.56	-0.4
4,768,139	+		DZA65_RS22050	0.56	-0.2
4,768,140	-		DZA65_RS22050	0.56	+0.1
4,768,140	-		DZA65_RS22050	0.56	-0.1
4,768,259	-		DZA65_RS22050	0.65	-1.6
4,768,260	+		DZA65_RS22050	0.65	+0.0
4,768,261	-		DZA65_RS22050	0.65	-0.8
4,768,299	+		DZA65_RS22050	0.68	-1.1
4,768,299	+		DZA65_RS22050	0.68	-0.7
4,768,299	+		DZA65_RS22050	0.68	-1.5
4,768,299	+		DZA65_RS22050	0.68	+1.0
4,768,300	-		DZA65_RS22050	0.68	-0.5
4,768,314	+		DZA65_RS22050	0.69	-1.5
4,768,314	+		DZA65_RS22050	0.69	-1.0
4,768,314	+		DZA65_RS22050	0.69	-0.1
4,768,314	+		DZA65_RS22050	0.69	-0.3
4,768,314	+		DZA65_RS22050	0.69	+0.2
4,768,315	-		DZA65_RS22050	0.69	-1.7
4,768,315	-		DZA65_RS22050	0.69	+1.3
4,768,315	-		DZA65_RS22050	0.69	+0.1
4,768,315	-		DZA65_RS22050	0.69	-0.5
4,768,315	-		DZA65_RS22050	0.69	+0.8
4,768,315	-		DZA65_RS22050	0.69	-0.3
4,768,353	+		DZA65_RS22050	0.72	-0.1
4,768,353	+		DZA65_RS22050	0.72	+0.3
4,768,353	+		DZA65_RS22050	0.72	-0.3
4,768,354	-		DZA65_RS22050	0.72	-0.5
4,768,354	-		DZA65_RS22050	0.72	-1.5
4,768,354	-		DZA65_RS22050	0.72	+0.2
4,768,356	-		DZA65_RS22050	0.72	-1.0
4,768,356	-		DZA65_RS22050	0.72	-0.3
4,768,399	-		DZA65_RS22050	0.75	-3.1
4,768,462	+		DZA65_RS22050	0.79	+1.3
4,768,463	-		DZA65_RS22050	0.80	-0.0
4,768,484	-		DZA65_RS22050	0.81	-0.6
4,768,683	-				-0.7
4,768,715	+				-0.9
4,768,729	+				-0.4
4,768,729	+				-0.7
4,768,730	-				-2.3
4,768,739	+				-0.7
4,768,739	+				-0.0
4,768,739	+				-1.1
4,768,739	+				-0.2
4,768,740	-				+1.7
4,768,740	-				+0.6
4,768,751	-				-0.4
4,768,781	-				-1.8
4,768,785	-				+0.5
4,768,873	+				+0.2
4,768,873	+				+0.5
4,769,064	+		DZA65_RS22055	0.21	-0.5
4,769,064	+		DZA65_RS22055	0.21	+0.5
4,769,064	+		DZA65_RS22055	0.21	-0.4
4,769,065	-		DZA65_RS22055	0.21	+0.7
4,769,065	-		DZA65_RS22055	0.21	-0.6
4,769,065	-		DZA65_RS22055	0.21	-1.8
4,769,065	-		DZA65_RS22055	0.21	-0.3
4,769,065	-		DZA65_RS22055	0.21	-1.5
4,769,065	-		DZA65_RS22055	0.21	+0.8
4,769,079	+		DZA65_RS22055	0.22	-0.5
4,769,079	+		DZA65_RS22055	0.22	+1.5
4,769,079	+		DZA65_RS22055	0.22	+2.1
4,769,079	+		DZA65_RS22055	0.22	+2.6
4,769,079	+		DZA65_RS22055	0.22	-2.1
4,769,080	-		DZA65_RS22055	0.22	+0.7
4,769,080	-		DZA65_RS22055	0.22	+0.8
4,769,080	-		DZA65_RS22055	0.22	-0.4
4,769,080	-		DZA65_RS22055	0.22	-0.5
4,769,080	-		DZA65_RS22055	0.22	-0.5
4,769,080	-		DZA65_RS22055	0.22	-0.8
4,769,088	+		DZA65_RS22055	0.23	+0.1
4,769,089	-		DZA65_RS22055	0.23	-0.5
4,769,089	-		DZA65_RS22055	0.23	+0.3
4,769,104	+		DZA65_RS22055	0.24	-0.5
4,769,118	+		DZA65_RS22055	0.26	-0.2
4,769,118	+		DZA65_RS22055	0.26	-0.9
4,769,119	-		DZA65_RS22055	0.26	-1.5
4,769,187	-		DZA65_RS22055	0.32	-0.5
4,769,457	+		DZA65_RS22055	0.56	+0.6
4,769,458	-		DZA65_RS22055	0.56	+0.1
4,769,458	-		DZA65_RS22055	0.56	-0.4
4,769,463	+		DZA65_RS22055	0.57	+1.3
4,769,463	+		DZA65_RS22055	0.57	-1.5
4,769,463	+		DZA65_RS22055	0.57	+0.4
4,769,463	+		DZA65_RS22055	0.57	-1.0
4,769,463	+		DZA65_RS22055	0.57	-1.8
4,769,463	+		DZA65_RS22055	0.57	+0.2
4,769,463	+		DZA65_RS22055	0.57	-1.8
4,769,463	+		DZA65_RS22055	0.57	-2.1
4,769,463	+		DZA65_RS22055	0.57	-0.1
4,769,463	+		DZA65_RS22055	0.57	+0.3
4,769,463	+		DZA65_RS22055	0.57	-1.8
4,769,463	+		DZA65_RS22055	0.57	+0.2
4,769,463	+		DZA65_RS22055	0.57	+0.0
4,769,463	+		DZA65_RS22055	0.57	-1.1
4,769,463	+		DZA65_RS22055	0.57	-0.4
4,769,463	+		DZA65_RS22055	0.57	+0.1
4,769,464	-		DZA65_RS22055	0.57	-0.2
4,769,464	-		DZA65_RS22055	0.57	-0.5
4,769,464	-		DZA65_RS22055	0.57	+2.1
4,769,464	-		DZA65_RS22055	0.57	+1.1
4,769,464	-		DZA65_RS22055	0.57	+0.6
4,769,464	-		DZA65_RS22055	0.57	+0.4
4,769,464	-		DZA65_RS22055	0.57	-2.3
4,769,464	-		DZA65_RS22055	0.57	+0.4
4,769,464	-		DZA65_RS22055	0.57	-1.4
4,769,464	-		DZA65_RS22055	0.57	+0.2
4,769,464	-		DZA65_RS22055	0.57	+1.7
4,769,464	-		DZA65_RS22055	0.57	+0.8
4,769,464	-		DZA65_RS22055	0.57	-1.3
4,769,464	-		DZA65_RS22055	0.57	-0.2
4,769,464	-		DZA65_RS22055	0.57	+0.5
4,769,464	-		DZA65_RS22055	0.57	-0.9
4,769,464	-		DZA65_RS22055	0.57	+0.1
4,769,464	-		DZA65_RS22055	0.57	+1.3
4,769,464	-		DZA65_RS22055	0.57	-0.5
4,769,464	-		DZA65_RS22055	0.57	+0.2
4,769,464	-		DZA65_RS22055	0.57	-0.0
4,769,464	-		DZA65_RS22055	0.57	-0.3
4,769,464	-		DZA65_RS22055	0.57	+0.6
4,769,464	-		DZA65_RS22055	0.57	-0.3
4,769,464	-		DZA65_RS22055	0.57	-0.1
4,769,464	-		DZA65_RS22055	0.57	-0.1
4,769,464	-		DZA65_RS22055	0.57	-1.1
4,769,592	+		DZA65_RS22055	0.68	+0.3
4,769,592	+		DZA65_RS22055	0.68	+0.7
4,769,592	+		DZA65_RS22055	0.68	+0.8
4,769,592	+		DZA65_RS22055	0.68	-1.5
4,769,593	-		DZA65_RS22055	0.69	-0.8
4,769,593	-		DZA65_RS22055	0.69	+1.5
4,769,713	-		DZA65_RS22055	0.79	-2.1
4,769,724	+		DZA65_RS22055	0.80	+1.1
4,769,724	+		DZA65_RS22055	0.80	-3.4
4,769,724	+		DZA65_RS22055	0.80	-0.2
4,769,724	+		DZA65_RS22055	0.80	+0.2
4,769,724	+		DZA65_RS22055	0.80	-0.9
4,769,724	+		DZA65_RS22055	0.80	-1.1
4,769,725	-		DZA65_RS22055	0.81	-0.5
4,769,725	-		DZA65_RS22055	0.81	-0.7
4,769,725	-		DZA65_RS22055	0.81	-0.2
4,769,726	+		DZA65_RS22055	0.81	+0.0
4,769,726	+		DZA65_RS22055	0.81	-0.5
4,769,726	+		DZA65_RS22055	0.81	-1.1
4,769,726	+		DZA65_RS22055	0.81	+0.5
4,769,727	-		DZA65_RS22055	0.81	+0.7