Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12465

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
2,663,340	+		DZA65_RS12460	0.37	+0.9
2,663,340	+		DZA65_RS12460	0.37	-0.2
2,663,340	+		DZA65_RS12460	0.37	-0.3
2,663,340	+		DZA65_RS12460	0.37	+0.5
2,663,340	+		DZA65_RS12460	0.37	+0.9
2,663,341	-		DZA65_RS12460	0.37	+1.5
2,663,454	+		DZA65_RS12460	0.44	+0.8
2,663,454	+		DZA65_RS12460	0.44	+0.2
2,663,455	-		DZA65_RS12460	0.44	+0.4
2,663,455	-		DZA65_RS12460	0.44	+0.4
2,663,475	-		DZA65_RS12460	0.45	-0.4
2,663,475	-		DZA65_RS12460	0.45	+1.5
2,663,509	-		DZA65_RS12460	0.48	-1.0
2,663,516	+		DZA65_RS12460	0.48	+1.2
2,663,516	+		DZA65_RS12460	0.48	-1.2
2,663,516	+		DZA65_RS12460	0.48	+0.1
2,663,516	+		DZA65_RS12460	0.48	+1.0
2,663,516	+		DZA65_RS12460	0.48	-0.4
2,663,517	-		DZA65_RS12460	0.48	+0.9
2,663,517	-		DZA65_RS12460	0.48	+0.8
2,663,517	-		DZA65_RS12460	0.48	+0.0
2,663,517	-		DZA65_RS12460	0.48	-1.1
2,663,517	-		DZA65_RS12460	0.48	-1.7
2,663,517	-		DZA65_RS12460	0.48	-0.9
2,663,517	-		DZA65_RS12460	0.48	-1.8
2,663,517	-		DZA65_RS12460	0.48	+0.5
2,663,517	-		DZA65_RS12460	0.48	-1.8
2,663,517	-		DZA65_RS12460	0.48	+0.5
2,663,527	-		DZA65_RS12460	0.49	-0.8
2,663,635	-		DZA65_RS12460	0.56	+1.5
2,663,646	+		DZA65_RS12460	0.56	-0.2
2,663,686	+		DZA65_RS12460	0.59	-2.1
2,663,687	-		DZA65_RS12460	0.59	+0.3
2,663,687	-		DZA65_RS12460	0.59	-0.1
2,663,796	+		DZA65_RS12460	0.66	+0.8
2,663,796	+		DZA65_RS12460	0.66	-0.4
2,663,797	-		DZA65_RS12460	0.66	-1.8
2,663,797	-		DZA65_RS12460	0.66	+2.1
2,663,797	-		DZA65_RS12460	0.66	-0.8
2,663,797	-		DZA65_RS12460	0.66	+0.2
2,663,797	-		DZA65_RS12460	0.66	-0.1
2,663,797	-		DZA65_RS12460	0.66	+0.2
2,663,797	-		DZA65_RS12460	0.66	-1.8
2,663,797	-		DZA65_RS12460	0.66	-2.4
2,663,797	-		DZA65_RS12460	0.66	+0.2
2,663,797	-		DZA65_RS12460	0.66	+2.5
2,663,797	-		DZA65_RS12460	0.66	-0.4
2,663,797	-		DZA65_RS12460	0.66	-1.6
2,663,826	+		DZA65_RS12460	0.68	+1.8
2,663,826	+		DZA65_RS12460	0.68	+0.0
2,663,826	+		DZA65_RS12460	0.68	+1.0
2,663,826	+		DZA65_RS12460	0.68	-0.1
2,663,826	+		DZA65_RS12460	0.68	-0.6
2,663,826	+		DZA65_RS12460	0.68	+0.2
2,663,826	+		DZA65_RS12460	0.68	+0.2
2,663,826	+		DZA65_RS12460	0.68	+0.6
2,663,827	-		DZA65_RS12460	0.68	+1.6
2,663,827	-		DZA65_RS12460	0.68	+0.6
2,663,827	-		DZA65_RS12460	0.68	-0.4
2,663,827	-		DZA65_RS12460	0.68	-0.3
2,663,827	-		DZA65_RS12460	0.68	-2.4
2,663,827	-		DZA65_RS12460	0.68	+1.0
2,663,858	-		DZA65_RS12460	0.70	+1.2
2,663,858	-		DZA65_RS12460	0.70	+1.6
2,664,007	-		DZA65_RS12460	0.79	+2.2
2,664,007	-		DZA65_RS12460	0.79	-0.3
2,664,012	+		DZA65_RS12460	0.80	-0.9
2,664,013	-		DZA65_RS12460	0.80	+0.8
2,664,028	-		DZA65_RS12460	0.81	-1.1
2,664,030	+		DZA65_RS12460	0.81	+0.0
2,664,030	+		DZA65_RS12460	0.81	-2.4
2,664,030	+		DZA65_RS12460	0.81	+0.4
2,664,030	+		DZA65_RS12460	0.81	-0.8
2,664,216	+				-1.4
2,664,250	+				-0.1
2,664,251	-				-0.3
2,664,251	-				-1.8
2,664,251	-				+0.1
2,664,251	-				-2.1
2,664,268	+				+0.3
2,664,269	-				-0.9
2,664,287	-				+1.8
2,664,458	+				-0.4
2,664,458	+				+1.1
2,664,461	+				+1.4
2,664,461	+				-0.6
2,664,461	+				-0.1
2,664,462	-				-0.8
2,664,462	-				-0.8
2,664,465	+				+0.8
2,664,465	+				+0.7
2,664,465	+				+0.2
2,664,465	+				-0.8
2,664,466	-				+0.4
2,664,466	-				+0.5
2,664,473	+				-0.8
2,664,474	-				-0.5
2,664,488	+				+0.4
2,664,605	+				-0.5
2,664,605	+				-0.7
2,664,605	+				-0.8
2,664,605	+				+0.2
2,664,605	+				+0.4
2,664,605	+				-0.1
2,664,606	-				+0.3
2,664,606	-				-0.2
2,664,606	-				-0.1
2,664,606	-				+0.2
2,664,630	+				-0.1
2,664,788	+		DZA65_RS12465	0.12	-0.3
2,664,789	-		DZA65_RS12465	0.12	+0.2
2,664,789	-		DZA65_RS12465	0.12	-0.5
2,664,789	-		DZA65_RS12465	0.12	-1.0
2,664,957	-		DZA65_RS12465	0.17	+1.1
2,664,957	-		DZA65_RS12465	0.17	-0.1
2,664,957	-		DZA65_RS12465	0.17	-0.5
2,665,013	+		DZA65_RS12465	0.18	-1.4
2,665,013	+		DZA65_RS12465	0.18	+0.4
2,665,014	-		DZA65_RS12465	0.18	+1.5
2,665,014	-		DZA65_RS12465	0.18	+0.6
2,665,023	+		DZA65_RS12465	0.18	+0.5
2,665,024	-		DZA65_RS12465	0.19	-1.4
2,665,024	-		DZA65_RS12465	0.19	-2.1
2,665,024	-		DZA65_RS12465	0.19	-0.8
2,665,024	-		DZA65_RS12465	0.19	-0.1
2,665,025	+		DZA65_RS12465	0.19	+0.1
2,665,025	+		DZA65_RS12465	0.19	-1.2
2,665,025	+		DZA65_RS12465	0.19	-2.1
2,665,025	+		DZA65_RS12465	0.19	-1.3
2,665,025	+		DZA65_RS12465	0.19	-0.9
2,665,025	+		DZA65_RS12465	0.19	-1.4
2,665,026	-		DZA65_RS12465	0.19	+0.5
2,665,026	-		DZA65_RS12465	0.19	+0.2
2,665,026	-		DZA65_RS12465	0.19	-1.4
2,665,026	-		DZA65_RS12465	0.19	-0.8
2,665,026	-		DZA65_RS12465	0.19	-0.6
2,665,243	+		DZA65_RS12465	0.24	+0.5
2,665,369	-		DZA65_RS12465	0.28	+1.0
2,665,393	-		DZA65_RS12465	0.28	+0.7
2,665,403	+		DZA65_RS12465	0.29	+1.2
2,665,403	+		DZA65_RS12465	0.29	-0.9
2,665,403	+		DZA65_RS12465	0.29	-1.4
2,665,403	+		DZA65_RS12465	0.29	+0.9
2,665,404	-		DZA65_RS12465	0.29	+0.4
2,665,404	-		DZA65_RS12465	0.29	+0.6
2,665,404	-		DZA65_RS12465	0.29	+1.2
2,665,404	-		DZA65_RS12465	0.29	+0.2
2,665,537	-		DZA65_RS12465	0.32	+0.0
2,665,547	-		DZA65_RS12465	0.32	-1.4
2,665,611	+		DZA65_RS12465	0.34	+0.4
2,665,611	+		DZA65_RS12465	0.34	+0.4
2,665,612	-		DZA65_RS12465	0.34	-0.1
2,665,613	+		DZA65_RS12465	0.34	-0.1
2,665,613	+		DZA65_RS12465	0.34	+0.7
2,665,614	-		DZA65_RS12465	0.34	+1.9
2,665,614	-		DZA65_RS12465	0.34	-0.6
2,665,716	-		DZA65_RS12465	0.37	-0.3
2,665,716	-		DZA65_RS12465	0.37	+1.8
2,665,748	+		DZA65_RS12465	0.38	-0.4
2,665,749	-		DZA65_RS12465	0.38	-1.8
2,665,901	+		DZA65_RS12465	0.42	-0.0
2,665,901	+		DZA65_RS12465	0.42	+1.3
2,665,901	+		DZA65_RS12465	0.42	+1.2
2,665,902	-		DZA65_RS12465	0.42	-0.1
2,665,902	-		DZA65_RS12465	0.42	-1.4
2,665,913	+		DZA65_RS12465	0.42	+0.8
2,665,913	+		DZA65_RS12465	0.42	-1.8
2,665,913	+		DZA65_RS12465	0.42	-1.2
2,665,913	+		DZA65_RS12465	0.42	+0.2
2,665,913	+		DZA65_RS12465	0.42	+1.4
2,665,913	+		DZA65_RS12465	0.42	+0.8
2,665,913	+		DZA65_RS12465	0.42	+0.2
2,665,914	-		DZA65_RS12465	0.42	-0.2
2,665,914	-		DZA65_RS12465	0.42	+1.6
2,665,914	-				+3.0
2,665,914	-		DZA65_RS12465	0.42	-0.4
2,665,914	-		DZA65_RS12465	0.42	+1.2
2,665,914	-		DZA65_RS12465	0.42	-0.1
2,665,914	-		DZA65_RS12465	0.42	-0.1
2,665,914	-		DZA65_RS12465	0.42	+0.3
2,665,914	-		DZA65_RS12465	0.42	-1.0
2,665,914	-		DZA65_RS12465	0.42	+1.7
2,665,914	-		DZA65_RS12465	0.42	-2.1
2,665,914	-		DZA65_RS12465	0.42	-2.8
2,665,914	-		DZA65_RS12465	0.42	+0.4
2,665,959	+		DZA65_RS12465	0.43	+2.0
2,665,959	+		DZA65_RS12465	0.43	+0.6
2,665,959	+		DZA65_RS12465	0.43	+0.0
2,665,959	+		DZA65_RS12465	0.43	+0.7
2,665,960	-		DZA65_RS12465	0.43	-0.1
2,665,960	-		DZA65_RS12465	0.43	-1.8
2,665,960	-		DZA65_RS12465	0.43	-0.9
2,666,045	+		DZA65_RS12465	0.46	+0.5
2,666,046	-		DZA65_RS12465	0.46	+0.4
2,666,046	-		DZA65_RS12465	0.46	-0.6
2,666,046	-		DZA65_RS12465	0.46	+0.1
2,666,256	-		DZA65_RS12465	0.51	+0.2
2,666,256	-		DZA65_RS12465	0.51	+0.6
2,666,277	+		DZA65_RS12465	0.52	-1.5
2,666,277	+		DZA65_RS12465	0.52	+0.8
2,666,277	+		DZA65_RS12465	0.52	+0.7
2,666,277	+		DZA65_RS12465	0.52	-0.4
2,666,278	-		DZA65_RS12465	0.52	-1.0
2,666,278	-		DZA65_RS12465	0.52	-0.0
2,666,278	-		DZA65_RS12465	0.52	+0.0
2,666,278	-		DZA65_RS12465	0.52	-2.6
2,666,278	-		DZA65_RS12465	0.52	+0.2
2,666,360	+		DZA65_RS12465	0.54	+0.6
2,666,360	+		DZA65_RS12465	0.54	+0.2
2,666,361	-		DZA65_RS12465	0.54	-0.4
2,666,412	+		DZA65_RS12465	0.55	-0.8
2,666,412	+		DZA65_RS12465	0.55	-2.0
2,666,412	+		DZA65_RS12465	0.55	+0.0
2,666,412	+		DZA65_RS12465	0.55	+0.2
2,666,413	-		DZA65_RS12465	0.55	+0.1
2,666,413	-		DZA65_RS12465	0.55	-0.2
2,666,413	-		DZA65_RS12465	0.55	+0.2
2,666,413	-		DZA65_RS12465	0.55	+1.2
2,666,413	-		DZA65_RS12465	0.55	+0.4
2,666,413	-		DZA65_RS12465	0.55	-0.8
2,666,413	-		DZA65_RS12465	0.55	+0.5
2,666,413	-		DZA65_RS12465	0.55	+0.3
2,666,413	-		DZA65_RS12465	0.55	-0.6
2,666,413	-		DZA65_RS12465	0.55	+0.1
2,666,430	-		DZA65_RS12465	0.56	+0.6
2,666,447	+		DZA65_RS12465	0.56	-2.1
2,666,447	+		DZA65_RS12465	0.56	+0.2
2,666,448	-		DZA65_RS12465	0.56	+0.2
2,666,475	+		DZA65_RS12465	0.57	-0.2
2,666,538	+		DZA65_RS12465	0.59	+1.7
2,666,538	+		DZA65_RS12465	0.59	+0.1
2,666,538	+		DZA65_RS12465	0.59	+0.2
2,666,538	+		DZA65_RS12465	0.59	-0.1
2,666,538	+		DZA65_RS12465	0.59	+0.1
2,666,539	-		DZA65_RS12465	0.59	+1.5
2,666,539	-		DZA65_RS12465	0.59	+0.0
2,666,539	-		DZA65_RS12465	0.59	+0.9
2,666,539	-		DZA65_RS12465	0.59	+0.6
2,666,539	-		DZA65_RS12465	0.59	-0.8
2,666,585	+		DZA65_RS12465	0.60	-0.4
2,666,585	+		DZA65_RS12465	0.60	+0.0
2,666,585	+		DZA65_RS12465	0.60	-1.4
2,666,585	+		DZA65_RS12465	0.60	-0.4
2,666,586	-		DZA65_RS12465	0.60	-0.1
2,666,586	-		DZA65_RS12465	0.60	-0.2
2,666,586	-		DZA65_RS12465	0.60	+1.0
2,666,603	+		DZA65_RS12465	0.60	+1.2
2,666,603	+		DZA65_RS12465	0.60	-1.4
2,666,603	+		DZA65_RS12465	0.60	+0.1
2,666,604	-		DZA65_RS12465	0.60	-1.3
2,666,648	+		DZA65_RS12465	0.62	-0.6
2,666,648	+		DZA65_RS12465	0.62	+0.2
2,666,649	-		DZA65_RS12465	0.62	+0.7
2,666,649	-		DZA65_RS12465	0.62	+1.0
2,666,649	-		DZA65_RS12465	0.62	-1.6
2,666,669	+		DZA65_RS12465	0.62	-0.6
2,666,792	+		DZA65_RS12465	0.65	+0.6
2,667,047	+		DZA65_RS12465	0.72	-0.5
2,667,048	-		DZA65_RS12465	0.72	-0.2
2,667,048	-		DZA65_RS12465	0.72	+0.6
2,667,048	-		DZA65_RS12465	0.72	+0.1
2,667,048	-		DZA65_RS12465	0.72	+0.5
2,667,048	-		DZA65_RS12465	0.72	+0.9
2,667,096	+		DZA65_RS12465	0.73	-0.4
2,667,110	+		DZA65_RS12465	0.74	-0.1
2,667,110	+		DZA65_RS12465	0.74	+0.8
2,667,111	-		DZA65_RS12465	0.74	+0.1
2,667,111	-		DZA65_RS12465	0.74	+1.0
2,667,122	+		DZA65_RS12465	0.74	+0.7
2,667,123	-		DZA65_RS12465	0.74	-0.7
2,667,154	-		DZA65_RS12465	0.75	-0.7
2,667,246	-		DZA65_RS12465	0.77	-0.1
2,667,281	+		DZA65_RS12465	0.78	+0.2
2,667,281	+		DZA65_RS12465	0.78	-0.1
2,667,281	+		DZA65_RS12465	0.78	-2.1
2,667,282	-		DZA65_RS12465	0.78	+0.4
2,667,287	-		DZA65_RS12465	0.78	+0.5
2,667,287	-		DZA65_RS12465	0.78	+1.0
2,667,348	+		DZA65_RS12465	0.80	+0.0
2,667,353	+		DZA65_RS12465	0.80	-1.6
2,667,354	-		DZA65_RS12465	0.80	+0.9
2,667,354	-		DZA65_RS12465	0.80	+0.5
2,667,363	+		DZA65_RS12465	0.80	-0.0
2,667,363	+		DZA65_RS12465	0.80	+0.5
2,667,364	-		DZA65_RS12465	0.81	-1.2
2,667,364	-		DZA65_RS12465	0.81	+0.9
2,667,365	+		DZA65_RS12465	0.81	+1.5
2,667,365	+		DZA65_RS12465	0.81	+0.5
2,667,365	+		DZA65_RS12465	0.81	-0.4
2,667,365	+		DZA65_RS12465	0.81	+0.1
2,667,366	-		DZA65_RS12465	0.81	-0.1
2,667,366	-		DZA65_RS12465	0.81	-0.9
2,667,366	-		DZA65_RS12465	0.81	+0.7
2,667,366	-		DZA65_RS12465	0.81	+1.2
2,667,437	+		DZA65_RS12465	0.82	-2.1
2,667,446	+		DZA65_RS12465	0.83	+0.0
2,667,460	+		DZA65_RS12465	0.83	-0.6
2,667,460	+		DZA65_RS12465	0.83	+2.5
2,667,460	+		DZA65_RS12465	0.83	+0.2
2,667,461	-		DZA65_RS12465	0.83	+0.6
2,667,500	+		DZA65_RS12465	0.84	-0.8
2,667,572	+		DZA65_RS12465	0.86	-0.0
2,667,572	+		DZA65_RS12465	0.86	+1.1
2,667,573	-		DZA65_RS12465	0.86	+1.8
2,667,651	+		DZA65_RS12465	0.88	-1.2
2,667,651	+		DZA65_RS12465	0.88	-0.1
2,667,651	+		DZA65_RS12465	0.88	-0.4
2,667,651	+		DZA65_RS12465	0.88	+0.5
2,667,651	+		DZA65_RS12465	0.88	-0.8
2,667,651	+		DZA65_RS12465	0.88	-0.9
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