Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06695

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
1,386,547	+		DZA65_RS06690	0.27	+0.6
1,386,548	-		DZA65_RS06690	0.27	+1.9
1,386,555	-		DZA65_RS06690	0.28	+0.1
1,386,602	+		DZA65_RS06690	0.31	+1.5
1,386,602	+		DZA65_RS06690	0.31	+0.6
1,386,602	+		DZA65_RS06690	0.31	+1.1
1,386,602	+		DZA65_RS06690	0.31	+1.4
1,386,603	-		DZA65_RS06690	0.32	+0.4
1,386,603	-		DZA65_RS06690	0.32	+1.1
1,386,603	-		DZA65_RS06690	0.32	+0.3
1,386,603	-		DZA65_RS06690	0.32	-0.1
1,386,704	-		DZA65_RS06690	0.40	+0.7
1,386,724	+		DZA65_RS06690	0.41	-0.0
1,386,725	-		DZA65_RS06690	0.41	+0.7
1,386,725	-		DZA65_RS06690	0.41	-0.5
1,386,831	+		DZA65_RS06690	0.50	+0.5
1,386,832	-		DZA65_RS06690	0.50	+1.5
1,386,832	-		DZA65_RS06690	0.50	+1.2
1,386,832	-		DZA65_RS06690	0.50	+0.5
1,386,877	+		DZA65_RS06690	0.54	+0.5
1,386,877	+		DZA65_RS06690	0.54	-0.9
1,386,877	+		DZA65_RS06690	0.54	+0.8
1,386,877	+		DZA65_RS06690	0.54	+0.5
1,386,877	+		DZA65_RS06690	0.54	+0.3
1,386,877	+		DZA65_RS06690	0.54	-0.3
1,386,877	+		DZA65_RS06690	0.54	+1.4
1,386,877	+		DZA65_RS06690	0.54	+0.6
1,386,877	+		DZA65_RS06690	0.54	+1.5
1,386,877	+		DZA65_RS06690	0.54	+0.8
1,386,877	+		DZA65_RS06690	0.54	-0.5
1,386,877	+		DZA65_RS06690	0.54	+0.6
1,386,877	+		DZA65_RS06690	0.54	+0.8
1,386,877	+		DZA65_RS06690	0.54	+1.6
1,386,877	+		DZA65_RS06690	0.54	-0.4
1,386,878	-		DZA65_RS06690	0.54	+0.1
1,386,878	-		DZA65_RS06690	0.54	+1.3
1,386,878	-		DZA65_RS06690	0.54	+0.2
1,386,878	-		DZA65_RS06690	0.54	+1.0
1,386,878	-		DZA65_RS06690	0.54	+1.0
1,386,878	-		DZA65_RS06690	0.54	+0.5
1,386,878	-		DZA65_RS06690	0.54	+0.3
1,386,878	-		DZA65_RS06690	0.54	+1.0
1,386,878	-		DZA65_RS06690	0.54	+0.3
1,386,878	-		DZA65_RS06690	0.54	+0.7
1,386,878	-		DZA65_RS06690	0.54	+1.3
1,386,879	+		DZA65_RS06690	0.54	-0.4
1,386,879	+		DZA65_RS06690	0.54	+0.5
1,386,879	+		DZA65_RS06690	0.54	+0.3
1,386,879	+		DZA65_RS06690	0.54	+0.2
1,386,879	+		DZA65_RS06690	0.54	-0.1
1,386,879	+		DZA65_RS06690	0.54	+1.4
1,386,879	+		DZA65_RS06690	0.54	+1.3
1,386,879	+		DZA65_RS06690	0.54	+1.1
1,386,879	+		DZA65_RS06690	0.54	-0.2
1,386,879	+		DZA65_RS06690	0.54	+0.8
1,386,879	+		DZA65_RS06690	0.54	+1.5
1,386,880	-		DZA65_RS06690	0.54	+0.6
1,386,880	-		DZA65_RS06690	0.54	+0.5
1,386,880	-				+1.9
1,386,880	-		DZA65_RS06690	0.54	+1.6
1,386,880	-		DZA65_RS06690	0.54	+0.9
1,386,880	-		DZA65_RS06690	0.54	+0.8
1,386,881	+		DZA65_RS06690	0.54	+1.4
1,386,881	+		DZA65_RS06690	0.54	-0.0
1,386,881	+		DZA65_RS06690	0.54	+0.2
1,386,881	+		DZA65_RS06690	0.54	-0.9
1,386,881	+		DZA65_RS06690	0.54	+0.7
1,386,881	+		DZA65_RS06690	0.54	+1.8
1,386,881	+		DZA65_RS06690	0.54	+0.6
1,386,881	+		DZA65_RS06690	0.54	-0.9
1,386,881	+		DZA65_RS06690	0.54	+1.2
1,386,881	+		DZA65_RS06690	0.54	-1.1
1,386,881	+		DZA65_RS06690	0.54	+0.7
1,386,881	+		DZA65_RS06690	0.54	+0.4
1,386,881	+		DZA65_RS06690	0.54	+1.9
1,386,882	-		DZA65_RS06690	0.54	+2.3
1,386,882	-		DZA65_RS06690	0.54	-0.7
1,386,882	-		DZA65_RS06690	0.54	+1.3
1,386,882	-		DZA65_RS06690	0.54	+0.7
1,386,882	-		DZA65_RS06690	0.54	+0.9
1,386,882	-		DZA65_RS06690	0.54	+1.5
1,386,882	-		DZA65_RS06690	0.54	+1.4
1,386,882	-		DZA65_RS06690	0.54	+0.7
1,386,882	-		DZA65_RS06690	0.54	-0.1
1,386,882	-		DZA65_RS06690	0.54	+0.9
1,386,882	-		DZA65_RS06690	0.54	+0.9
1,386,882	-		DZA65_RS06690	0.54	-0.0
1,386,882	-		DZA65_RS06690	0.54	+0.6
1,386,943	+		DZA65_RS06690	0.59	+1.1
1,386,943	+		DZA65_RS06690	0.59	+1.0
1,386,943	+		DZA65_RS06690	0.59	-1.8
1,386,943	+		DZA65_RS06690	0.59	+0.5
1,386,943	+		DZA65_RS06690	0.59	-0.4
1,386,943	+		DZA65_RS06690	0.59	+1.1
1,386,943	+		DZA65_RS06690	0.59	+0.9
1,386,943	+		DZA65_RS06690	0.59	+1.2
1,386,943	+		DZA65_RS06690	0.59	+1.8
1,386,944	-		DZA65_RS06690	0.59	+2.1
1,386,944	-		DZA65_RS06690	0.59	+0.6
1,386,944	-		DZA65_RS06690	0.59	+0.5
1,386,944	-		DZA65_RS06690	0.59	+0.7
1,386,944	-		DZA65_RS06690	0.59	+0.9
1,386,944	-		DZA65_RS06690	0.59	+0.6
1,386,944	-		DZA65_RS06690	0.59	+0.9
1,386,944	-		DZA65_RS06690	0.59	+0.1
1,386,944	-		DZA65_RS06690	0.59	+0.1
1,386,944	-		DZA65_RS06690	0.59	+1.1
1,386,944	-		DZA65_RS06690	0.59	+0.3
1,386,945	+		DZA65_RS06690	0.59	+0.9
1,386,945	+		DZA65_RS06690	0.59	+0.4
1,386,945	+		DZA65_RS06690	0.59	+0.5
1,386,945	+		DZA65_RS06690	0.59	+0.6
1,386,945	+		DZA65_RS06690	0.59	+0.2
1,386,945	+		DZA65_RS06690	0.59	+2.1
1,386,945	+		DZA65_RS06690	0.59	+0.7
1,386,945	+		DZA65_RS06690	0.59	+1.0
1,386,946	-		DZA65_RS06690	0.59	+1.0
1,386,946	-		DZA65_RS06690	0.59	+0.6
1,386,946	-		DZA65_RS06690	0.59	+0.1
1,386,946	-		DZA65_RS06690	0.59	-0.4
1,386,946	-		DZA65_RS06690	0.59	+0.5
1,386,946	-		DZA65_RS06690	0.59	+0.5
1,386,946	-		DZA65_RS06690	0.59	+0.9
1,386,946	-		DZA65_RS06690	0.59	+0.5
1,386,946	-		DZA65_RS06690	0.59	+1.0
1,387,049	-		DZA65_RS06690	0.68	+0.1
1,387,049	-		DZA65_RS06690	0.68	+0.2
1,387,130	+		DZA65_RS06690	0.74	+1.0
1,387,130	+		DZA65_RS06690	0.74	+0.0
1,387,130	+		DZA65_RS06690	0.74	+1.6
1,387,131	-		DZA65_RS06690	0.74	+1.0
1,387,131	-		DZA65_RS06690	0.74	+1.4
1,387,137	+		DZA65_RS06690	0.75	+0.7
1,387,137	+		DZA65_RS06690	0.75	+1.5
1,387,137	+		DZA65_RS06690	0.75	+0.1
1,387,137	+		DZA65_RS06690	0.75	+0.5
1,387,137	+		DZA65_RS06690	0.75	-0.5
1,387,137	+		DZA65_RS06690	0.75	+0.8
1,387,137	+		DZA65_RS06690	0.75	+0.9
1,387,137	+		DZA65_RS06690	0.75	-0.6
1,387,137	+		DZA65_RS06690	0.75	+0.3
1,387,137	+		DZA65_RS06690	0.75	+0.1
1,387,138	-		DZA65_RS06690	0.75	+1.4
1,387,138	-		DZA65_RS06690	0.75	-1.7
1,387,138	-		DZA65_RS06690	0.75	+0.9
1,387,138	-				-1.7
1,387,138	-		DZA65_RS06690	0.75	+0.7
1,387,138	-		DZA65_RS06690	0.75	+1.0
1,387,138	-		DZA65_RS06690	0.75	+0.5
1,387,138	-		DZA65_RS06690	0.75	-1.7
1,387,138	-		DZA65_RS06690	0.75	-0.0
1,387,138	-		DZA65_RS06690	0.75	+0.3
1,387,138	-		DZA65_RS06690	0.75	+0.8
1,387,138	-		DZA65_RS06690	0.75	-0.0
1,387,139	+		DZA65_RS06690	0.75	+1.5
1,387,139	+		DZA65_RS06690	0.75	+1.8
1,387,140	-		DZA65_RS06690	0.75	-0.7
1,387,375	-				+0.9
1,387,464	+				+0.3
1,387,464	+				-0.6
1,387,464	+				+0.6
1,387,464	+				+1.9
1,387,464	+				+1.0
1,387,465	-				-0.7
1,387,465	-				-0.5
1,387,465	-				-1.1
1,387,465	-				+3.0
1,387,465	-				+0.6
1,387,465	-				+0.3
1,387,465	-				-0.5
1,387,465	-				-1.1
1,387,465	-				+0.5
1,387,469	+				+1.4
1,387,469	+				+1.7
1,387,469	+				+0.1
1,387,469	+				+0.2
1,387,469	+				+1.1
1,387,469	+				+0.7
1,387,469	+				+0.7
1,387,470	-				-2.7
1,387,470	-				-0.0
1,387,470	-				+0.1
1,387,470	-				-0.4
1,387,476	+				+0.2
1,387,476	+				+0.4
1,387,476	+				-0.2
1,387,476	+				+1.3
1,387,477	-				+1.1
1,387,477	-				+0.9
1,387,477	-				+0.7
1,387,483	+				+0.3
1,387,484	-				+0.5
1,387,484	-				+0.6
1,387,513	+				+1.2
1,387,514	-				+0.5
1,387,514	-				+1.5
1,387,514	-				+0.5
1,387,514	-				+1.6
1,387,664	+		DZA65_RS06695	0.16	+2.0
1,387,664	+		DZA65_RS06695	0.16	+1.1
1,387,664	+		DZA65_RS06695	0.16	+0.7
1,387,664	+		DZA65_RS06695	0.16	+1.1
1,387,665	-		DZA65_RS06695	0.16	+0.6
1,387,665	-		DZA65_RS06695	0.16	+0.4
1,387,665	-		DZA65_RS06695	0.16	+0.3
1,387,665	-		DZA65_RS06695	0.16	+0.9
1,387,746	+		DZA65_RS06695	0.24	-0.4
1,387,747	-		DZA65_RS06695	0.24	+2.5
1,387,749	+		DZA65_RS06695	0.24	+0.3
1,387,749	+		DZA65_RS06695	0.24	-0.2
1,387,749	+		DZA65_RS06695	0.24	-0.3
1,387,749	+		DZA65_RS06695	0.24	+0.5
1,387,749	+		DZA65_RS06695	0.24	+1.8
1,387,749	+		DZA65_RS06695	0.24	-2.7
1,387,749	+		DZA65_RS06695	0.24	+0.5
1,387,749	+		DZA65_RS06695	0.24	+1.3
1,387,749	+		DZA65_RS06695	0.24	-0.9
1,387,749	+		DZA65_RS06695	0.24	+1.4
1,387,749	+		DZA65_RS06695	0.24	+1.2
1,387,750	-		DZA65_RS06695	0.24	+2.2
1,387,750	-		DZA65_RS06695	0.24	+1.6
1,387,750	-				-0.1
1,387,750	-		DZA65_RS06695	0.24	+0.8
1,387,750	-		DZA65_RS06695	0.24	+1.7
1,387,750	-		DZA65_RS06695	0.24	+0.7
1,387,750	-		DZA65_RS06695	0.24	+1.1
1,387,750	-		DZA65_RS06695	0.24	+1.1
1,387,750	-		DZA65_RS06695	0.24	+1.2
1,387,750	-		DZA65_RS06695	0.24	-0.6
1,387,750	-		DZA65_RS06695	0.24	-2.0
1,387,750	-		DZA65_RS06695	0.24	-0.2
1,387,750	-		DZA65_RS06695	0.24	+0.7
1,387,750	-		DZA65_RS06695	0.24	+0.9
1,387,750	-		DZA65_RS06695	0.24	+0.9
1,387,751	+		DZA65_RS06695	0.24	+0.0
1,387,751	+		DZA65_RS06695	0.24	+0.3
1,387,751	+		DZA65_RS06695	0.24	-0.7
1,387,751	+		DZA65_RS06695	0.24	+0.9
1,387,751	+		DZA65_RS06695	0.24	+3.3
1,387,751	+		DZA65_RS06695	0.24	+0.1
1,387,752	-		DZA65_RS06695	0.24	-0.1
1,387,752	-		DZA65_RS06695	0.24	+0.4
1,387,752	-		DZA65_RS06695	0.24	-0.2
1,387,902	+		DZA65_RS06695	0.37	+0.0
1,387,902	+		DZA65_RS06695	0.37	+0.9
1,387,902	+		DZA65_RS06695	0.37	+0.9
1,387,902	+		DZA65_RS06695	0.37	+0.8
1,387,902	+		DZA65_RS06695	0.37	+0.6
1,387,903	-		DZA65_RS06695	0.37	+1.1
1,387,920	+		DZA65_RS06695	0.39	+0.0
1,387,920	+		DZA65_RS06695	0.39	-0.2
1,387,920	+		DZA65_RS06695	0.39	-0.7
1,387,920	+		DZA65_RS06695	0.39	+0.6
1,387,920	+		DZA65_RS06695	0.39	-0.7
1,387,920	+		DZA65_RS06695	0.39	-0.3
1,387,920	+		DZA65_RS06695	0.39	+0.6
1,387,920	+		DZA65_RS06695	0.39	+1.1
1,387,920	+		DZA65_RS06695	0.39	-2.9
1,387,920	+		DZA65_RS06695	0.39	+0.4
1,387,920	+		DZA65_RS06695	0.39	-0.3
1,387,921	-		DZA65_RS06695	0.39	+1.5
1,387,921	-		DZA65_RS06695	0.39	+0.9
1,387,921	-		DZA65_RS06695	0.39	+0.6
1,387,921	-		DZA65_RS06695	0.39	+1.1
1,387,921	-		DZA65_RS06695	0.39	+1.1
1,387,921	-		DZA65_RS06695	0.39	+1.1
1,387,921	-		DZA65_RS06695	0.39	-0.7
1,387,921	-		DZA65_RS06695	0.39	-1.3
1,387,921	-		DZA65_RS06695	0.39	-1.5
1,387,921	-		DZA65_RS06695	0.39	+0.6
1,387,921	-		DZA65_RS06695	0.39	+0.9
1,387,921	-		DZA65_RS06695	0.39	-2.5
1,387,921	-		DZA65_RS06695	0.39	+0.7
1,388,132	+		DZA65_RS06695	0.57	+0.2
1,388,132	+		DZA65_RS06695	0.57	+0.1
1,388,132	+		DZA65_RS06695	0.57	+0.1
1,388,132	+		DZA65_RS06695	0.57	+1.0
1,388,132	+		DZA65_RS06695	0.57	+2.0
1,388,132	+		DZA65_RS06695	0.57	+0.6
1,388,132	+		DZA65_RS06695	0.57	+0.1
1,388,132	+		DZA65_RS06695	0.57	+0.3
1,388,132	+		DZA65_RS06695	0.57	-0.5
1,388,133	-		DZA65_RS06695	0.57	+0.6
1,388,133	-		DZA65_RS06695	0.57	+1.5
1,388,133	-		DZA65_RS06695	0.57	+0.7
1,388,133	-		DZA65_RS06695	0.57	+0.3
1,388,133	-		DZA65_RS06695	0.57	-1.3
1,388,133	-		DZA65_RS06695	0.57	+0.2
1,388,133	-		DZA65_RS06695	0.57	+1.3
1,388,133	-		DZA65_RS06695	0.57	+0.5
1,388,133	-		DZA65_RS06695	0.57	+1.0
1,388,133	-		DZA65_RS06695	0.57	-0.0
1,388,154	+		DZA65_RS06695	0.59	-0.2
1,388,154	+		DZA65_RS06695	0.59	+0.0
1,388,154	+		DZA65_RS06695	0.59	-0.3
1,388,154	+		DZA65_RS06695	0.59	+1.1
1,388,154	+		DZA65_RS06695	0.59	+1.1
1,388,154	+				-0.5
1,388,154	+		DZA65_RS06695	0.59	-0.1
1,388,154	+		DZA65_RS06695	0.59	+0.1
1,388,154	+		DZA65_RS06695	0.59	+1.0
1,388,155	-		DZA65_RS06695	0.59	+0.1
1,388,155	-		DZA65_RS06695	0.59	-0.6
1,388,155	-		DZA65_RS06695	0.59	+0.4
1,388,155	-		DZA65_RS06695	0.59	+0.6
1,388,155	-		DZA65_RS06695	0.59	+0.3
1,388,155	-		DZA65_RS06695	0.59	+1.3
1,388,331	-		DZA65_RS06695	0.74	+1.6
1,388,331	-		DZA65_RS06695	0.74	+0.2
1,388,350	+		DZA65_RS06695	0.76	+0.3
1,388,350	+		DZA65_RS06695	0.76	-0.7
1,388,350	+		DZA65_RS06695	0.76	-0.1
1,388,351	-		DZA65_RS06695	0.76	-1.3
1,388,351	-		DZA65_RS06695	0.76	+0.6
1,388,351	-		DZA65_RS06695	0.76	+0.1
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