Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00480

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
113,211	+		DZA65_RS00470	0.73	+0.2
113,250	+		DZA65_RS00470	0.77	-0.7
113,250	+		DZA65_RS00470	0.77	-1.4
113,252	+		DZA65_RS00470	0.77	-2.1
113,252	+		DZA65_RS00470	0.77	-0.8
113,252	+		DZA65_RS00470	0.77	-1.3
113,253	-		DZA65_RS00470	0.77	-0.3
113,253	-		DZA65_RS00470	0.77	-1.0
113,253	-		DZA65_RS00470	0.77	-0.9
113,253	-		DZA65_RS00470	0.77	-0.8
113,253	-		DZA65_RS00470	0.77	+0.3
113,253	-		DZA65_RS00470	0.77	-0.6
113,253	-		DZA65_RS00470	0.77	+0.8
113,267	+		DZA65_RS00470	0.78	-1.5
113,267	+		DZA65_RS00470	0.78	-0.3
113,364	+		DZA65_RS00470	0.87	-0.2
113,364	+		DZA65_RS00470	0.87	-0.9
113,365	-		DZA65_RS00470	0.87	-1.5
113,365	-		DZA65_RS00470	0.87	-0.4
113,387	+		DZA65_RS00470	0.89	-1.3
113,388	-		DZA65_RS00470	0.89	-1.8
113,397	+		DZA65_RS00470	0.90	-0.5
113,501	+				-1.1
113,501	+				-1.1
113,541	-				-1.1
113,541	-				-0.1
113,581	+		DZA65_RS00475	0.17	-0.1
113,581	+		DZA65_RS00475	0.17	+0.5
113,582	-		DZA65_RS00475	0.17	-0.1
113,582	-		DZA65_RS00475	0.17	+1.4
113,699	+		DZA65_RS00475	0.44	+0.1
113,699	+		DZA65_RS00475	0.44	+1.5
113,699	+		DZA65_RS00475	0.44	+0.3
113,699	+		DZA65_RS00475	0.44	+0.0
113,700	-		DZA65_RS00475	0.44	-1.1
113,700	-		DZA65_RS00475	0.44	+0.0
113,700	-		DZA65_RS00475	0.44	-0.4
113,821	+		DZA65_RS00475	0.72	-0.7
113,822	-		DZA65_RS00475	0.73	+0.4
113,822	-		DZA65_RS00475	0.73	+0.5
113,822	-		DZA65_RS00475	0.73	-0.5
113,853	+		DZA65_RS00475	0.80	-2.6
113,853	+		DZA65_RS00475	0.80	+0.8
113,853	+		DZA65_RS00475	0.80	-0.2
113,853	+		DZA65_RS00475	0.80	+0.7
113,854	-		DZA65_RS00475	0.80	+0.9
113,854	-		DZA65_RS00475	0.80	-0.9
113,854	-		DZA65_RS00475	0.80	+0.0
113,854	-		DZA65_RS00475	0.80	+0.1
113,854	-		DZA65_RS00475	0.80	+0.2
113,854	-		DZA65_RS00475	0.80	-1.2
113,859	+		DZA65_RS00475	0.81	-1.7
113,859	+		DZA65_RS00475	0.81	-0.3
113,904	-				-0.2
113,904	-				-0.4
113,904	-				+0.1
113,917	+				+0.1
113,967	-				-0.5
113,997	+				-0.2
113,998	-				-0.6
114,022	+				-0.2
114,022	+				+0.2
114,023	-				+0.5
114,023	-				-1.5
114,038	+				+0.1
114,038	+				+1.2
114,038	+				-0.1
114,039	-				+0.5
114,039	-				-1.1
114,106	+				-0.1
114,106	+				-0.0
114,107	-				+0.5
114,155	+				-0.5
114,155	+				+0.1
114,155	+				+0.8
114,155	+				-0.2
114,155	+				+1.1
114,155	+				-0.2
114,155	+				+2.0
114,155	+				+0.7
114,155	+				-0.6
114,155	+				+0.6
114,155	+				-0.7
114,155	+				+0.6
114,155	+				+1.5
114,155	+				-1.0
114,155	+				-0.1
114,155	+				-1.4
114,155	+				-0.6
114,155	+				+1.9
114,156	-				+0.5
114,156	-				+1.0
114,156	-				-0.1
114,156	-				-1.4
114,156	-				+0.2
114,156	-				-0.3
114,156	-				+0.3
114,156	-				-0.5
114,156	-				-0.1
114,156	-				-0.2
114,156	-				-0.8
114,156	-				-0.8
114,156	-				+1.1
114,156	-				+1.2
114,156	-				+0.2
114,156	-				-2.1
114,156	-				-0.3
114,232	+		DZA65_RS00480	0.13	-1.4
114,232	+		DZA65_RS00480	0.13	-0.2
114,232	+		DZA65_RS00480	0.13	+0.8
114,233	-		DZA65_RS00480	0.13	+0.7
114,233	-		DZA65_RS00480	0.13	-3.2
114,233	-		DZA65_RS00480	0.13	-0.9
114,233	-		DZA65_RS00480	0.13	-1.3
114,233	-		DZA65_RS00480	0.13	-2.0
114,255	+		DZA65_RS00480	0.14	-1.1
114,255	+		DZA65_RS00480	0.14	+0.1
114,256	-		DZA65_RS00480	0.14	-0.8
114,289	+		DZA65_RS00480	0.17	+0.3
114,290	-		DZA65_RS00480	0.17	+1.8
114,342	+		DZA65_RS00480	0.20	-0.4
114,354	+		DZA65_RS00480	0.21	-0.1
114,354	+				+0.1
114,354	+		DZA65_RS00480	0.21	-1.1
114,354	+		DZA65_RS00480	0.21	+0.3
114,355	-		DZA65_RS00480	0.21	-2.1
114,355	-		DZA65_RS00480	0.21	-0.2
114,355	-		DZA65_RS00480	0.21	+0.3
114,355	-		DZA65_RS00480	0.21	+0.3
114,355	-		DZA65_RS00480	0.21	+0.1
114,407	+		DZA65_RS00480	0.24	-1.1
114,408	-		DZA65_RS00480	0.24	+1.4
114,431	+		DZA65_RS00480	0.26	+0.1
114,431	+		DZA65_RS00480	0.26	-0.2
114,431	+		DZA65_RS00480	0.26	+0.5
114,431	+		DZA65_RS00480	0.26	-0.2
114,431	+		DZA65_RS00480	0.26	-2.8
114,431	+		DZA65_RS00480	0.26	-0.3
114,432	-		DZA65_RS00480	0.26	-0.5
114,432	-		DZA65_RS00480	0.26	-0.3
114,432	-				+2.1
114,432	-		DZA65_RS00480	0.26	+0.9
114,432	-		DZA65_RS00480	0.26	-2.1
114,484	+		DZA65_RS00480	0.29	+0.5
114,484	+		DZA65_RS00480	0.29	+0.5
114,484	+		DZA65_RS00480	0.29	+0.8
114,484	+		DZA65_RS00480	0.29	+0.0
114,485	-		DZA65_RS00480	0.29	+0.5
114,485	-		DZA65_RS00480	0.29	+0.9
114,485	-		DZA65_RS00480	0.29	-1.1
114,485	-		DZA65_RS00480	0.29	-0.2
114,489	-		DZA65_RS00480	0.30	-1.5
114,489	-		DZA65_RS00480	0.30	-1.1
114,489	-		DZA65_RS00480	0.30	-0.6
114,489	-		DZA65_RS00480	0.30	-0.3
114,601	+		DZA65_RS00480	0.37	-0.8
114,602	-		DZA65_RS00480	0.37	+0.5
114,617	-		DZA65_RS00480	0.38	-0.2
114,643	+		DZA65_RS00480	0.40	-0.2
114,649	+		DZA65_RS00480	0.40	+2.5
114,649	+		DZA65_RS00480	0.40	-0.2
114,649	+		DZA65_RS00480	0.40	+0.0
114,650	-		DZA65_RS00480	0.40	-0.9
114,650	-		DZA65_RS00480	0.40	+0.2
114,650	-		DZA65_RS00480	0.40	-0.4
114,650	-		DZA65_RS00480	0.40	-0.8
114,650	-		DZA65_RS00480	0.40	+0.7
114,650	-		DZA65_RS00480	0.40	+0.2
114,650	-		DZA65_RS00480	0.40	-1.8
114,650	-		DZA65_RS00480	0.40	-0.2
114,686	+				+3.1
114,687	-		DZA65_RS00480	0.43	-1.5
114,687	-		DZA65_RS00480	0.43	-0.2
114,687	-		DZA65_RS00480	0.43	+1.1
114,778	+		DZA65_RS00480	0.49	-0.4
114,778	+		DZA65_RS00480	0.49	-0.3
114,778	+		DZA65_RS00480	0.49	+0.3
114,778	+		DZA65_RS00480	0.49	-0.9
114,778	+		DZA65_RS00480	0.49	-0.7
114,779	-		DZA65_RS00480	0.49	+0.2
114,779	-		DZA65_RS00480	0.49	+1.2
114,779	-		DZA65_RS00480	0.49	-0.9
114,779	-		DZA65_RS00480	0.49	+1.3
114,779	-		DZA65_RS00480	0.49	+0.7
114,779	-		DZA65_RS00480	0.49	+0.7
114,779	-		DZA65_RS00480	0.49	+0.9
114,779	-		DZA65_RS00480	0.49	+0.9
114,779	-		DZA65_RS00480	0.49	+1.8
114,779	-		DZA65_RS00480	0.49	+0.7
114,816	+		DZA65_RS00480	0.51	-2.1
114,816	+		DZA65_RS00480	0.51	+0.2
114,816	+		DZA65_RS00480	0.51	-3.0
114,816	+		DZA65_RS00480	0.51	+1.0
114,822	+		DZA65_RS00480	0.52	-0.2
114,822	+		DZA65_RS00480	0.52	+1.1
114,822	+		DZA65_RS00480	0.52	-0.7
114,822	+		DZA65_RS00480	0.52	-0.8
114,822	+		DZA65_RS00480	0.52	-0.8
114,822	+		DZA65_RS00480	0.52	-0.3
114,822	+		DZA65_RS00480	0.52	-0.5
114,822	+		DZA65_RS00480	0.52	+1.2
114,822	+		DZA65_RS00480	0.52	+0.2
114,822	+		DZA65_RS00480	0.52	-0.3
114,822	+		DZA65_RS00480	0.52	+2.7
114,822	+		DZA65_RS00480	0.52	+1.2
114,822	+		DZA65_RS00480	0.52	+1.1
114,822	+		DZA65_RS00480	0.52	-0.5
114,822	+		DZA65_RS00480	0.52	+0.5
114,822	+		DZA65_RS00480	0.52	-1.7
114,822	+		DZA65_RS00480	0.52	-2.1
114,822	+		DZA65_RS00480	0.52	-0.8
114,822	+		DZA65_RS00480	0.52	-1.0
114,822	+		DZA65_RS00480	0.52	+0.1
114,823	-		DZA65_RS00480	0.52	+0.0
114,823	-		DZA65_RS00480	0.52	-0.7
114,823	-		DZA65_RS00480	0.52	-1.6
114,823	-		DZA65_RS00480	0.52	+0.9
114,823	-		DZA65_RS00480	0.52	-0.8
114,823	-				-1.1
114,823	-		DZA65_RS00480	0.52	+0.0
114,823	-		DZA65_RS00480	0.52	-0.5
114,823	-		DZA65_RS00480	0.52	-1.1
114,823	-		DZA65_RS00480	0.52	-0.4
114,823	-		DZA65_RS00480	0.52	-1.4
114,823	-		DZA65_RS00480	0.52	-1.9
114,823	-		DZA65_RS00480	0.52	-1.5
114,823	-		DZA65_RS00480	0.52	-0.7
114,823	-		DZA65_RS00480	0.52	-0.2
114,843	+		DZA65_RS00480	0.53	-0.2
114,843	+		DZA65_RS00480	0.53	-0.7
114,843	+		DZA65_RS00480	0.53	+0.8
114,844	-		DZA65_RS00480	0.53	+0.0
114,844	-		DZA65_RS00480	0.53	-0.6
114,910	-		DZA65_RS00480	0.57	+1.5
114,910	-		DZA65_RS00480	0.57	+0.1
114,912	+		DZA65_RS00480	0.57	+0.7
114,912	+		DZA65_RS00480	0.57	+0.6
114,912	+		DZA65_RS00480	0.57	-0.1
114,913	-		DZA65_RS00480	0.57	+0.2
114,913	-		DZA65_RS00480	0.57	+0.9
114,913	-		DZA65_RS00480	0.57	+0.4
114,913	-		DZA65_RS00480	0.57	+0.2
114,913	-		DZA65_RS00480	0.57	+0.1
114,913	-		DZA65_RS00480	0.57	+0.1
114,913	-		DZA65_RS00480	0.57	+1.3
114,913	-		DZA65_RS00480	0.57	-0.3
114,916	-		DZA65_RS00480	0.58	-0.5
114,973	-		DZA65_RS00480	0.61	-1.8
114,973	-		DZA65_RS00480	0.61	-0.4
114,993	+		DZA65_RS00480	0.63	-0.4
114,993	+		DZA65_RS00480	0.63	-1.5
114,993	+		DZA65_RS00480	0.63	-0.8
114,993	+				+3.5
114,993	+		DZA65_RS00480	0.63	+1.0
114,993	+		DZA65_RS00480	0.63	-0.2
114,993	+		DZA65_RS00480	0.63	+1.4
114,993	+		DZA65_RS00480	0.63	+1.2
114,994	-		DZA65_RS00480	0.63	-1.1
114,994	-		DZA65_RS00480	0.63	-0.3
114,994	-		DZA65_RS00480	0.63	-1.1
114,994	-		DZA65_RS00480	0.63	-0.9
114,994	-		DZA65_RS00480	0.63	-0.8
114,994	-				+0.5
114,994	-		DZA65_RS00480	0.63	+1.4
115,049	+		DZA65_RS00480	0.66	-2.8
115,049	+		DZA65_RS00480	0.66	-0.3
115,049	+		DZA65_RS00480	0.66	-0.0
115,049	+		DZA65_RS00480	0.66	+0.4
115,049	+		DZA65_RS00480	0.66	+0.0
115,050	-		DZA65_RS00480	0.66	+1.7
115,050	-		DZA65_RS00480	0.66	-2.1
115,050	-		DZA65_RS00480	0.66	-0.3
115,050	-		DZA65_RS00480	0.66	-0.3
115,050	-		DZA65_RS00480	0.66	-0.8
115,050	-		DZA65_RS00480	0.66	-0.7
115,050	-		DZA65_RS00480	0.66	+0.3
115,050	-		DZA65_RS00480	0.66	-0.8
115,050	-		DZA65_RS00480	0.66	-0.0
115,050	-		DZA65_RS00480	0.66	-0.5
115,050	-		DZA65_RS00480	0.66	-0.6
115,050	-		DZA65_RS00480	0.66	+1.3
115,050	-		DZA65_RS00480	0.66	-0.6
115,050	-		DZA65_RS00480	0.66	-2.3
115,050	-		DZA65_RS00480	0.66	+1.1
115,050	-		DZA65_RS00480	0.66	-0.8
115,084	+		DZA65_RS00480	0.69	-0.3
115,084	+		DZA65_RS00480	0.69	-0.3
115,084	+		DZA65_RS00480	0.69	+0.0
115,084	+		DZA65_RS00480	0.69	-1.1
115,084	+		DZA65_RS00480	0.69	-0.3
115,085	-		DZA65_RS00480	0.69	+0.5
115,085	-		DZA65_RS00480	0.69	-0.9
115,133	+		DZA65_RS00480	0.72	+0.6
115,133	+		DZA65_RS00480	0.72	-0.2
115,133	+		DZA65_RS00480	0.72	+0.2
115,133	+		DZA65_RS00480	0.72	-2.0
115,133	+		DZA65_RS00480	0.72	-0.7
115,133	+		DZA65_RS00480	0.72	+0.9
115,133	+		DZA65_RS00480	0.72	+0.5
115,134	-		DZA65_RS00480	0.72	-0.6
115,134	-		DZA65_RS00480	0.72	-0.4
115,134	-		DZA65_RS00480	0.72	-0.3
115,134	-		DZA65_RS00480	0.72	-0.6
115,134	-		DZA65_RS00480	0.72	-2.1
115,134	-		DZA65_RS00480	0.72	-1.1
115,134	-		DZA65_RS00480	0.72	-0.0
115,134	-		DZA65_RS00480	0.72	-0.9
115,144	+		DZA65_RS00480	0.73	+1.3
115,144	+		DZA65_RS00480	0.73	+0.4
115,144	+		DZA65_RS00480	0.73	+0.8
115,144	+		DZA65_RS00480	0.73	-0.5
115,145	-		DZA65_RS00480	0.73	+0.3
115,145	-		DZA65_RS00480	0.73	-0.5
115,145	-		DZA65_RS00480	0.73	+0.4
115,156	+		DZA65_RS00480	0.73	+1.4
115,156	+		DZA65_RS00480	0.73	+0.5
115,156	+		DZA65_RS00480	0.73	-2.3
115,156	+		DZA65_RS00480	0.73	+0.6
115,156	+		DZA65_RS00480	0.73	-0.7
115,156	+		DZA65_RS00480	0.73	-0.7
115,156	+		DZA65_RS00480	0.73	+0.3
115,156	+		DZA65_RS00480	0.73	-0.5
115,156	+		DZA65_RS00480	0.73	+0.6
115,156	+		DZA65_RS00480	0.73	-1.7
115,156	+		DZA65_RS00480	0.73	+1.5
115,157	-		DZA65_RS00480	0.73	-0.1
115,157	-		DZA65_RS00480	0.73	-0.4
115,157	-		DZA65_RS00480	0.73	-0.9
115,157	-		DZA65_RS00480	0.73	-0.5
115,157	-		DZA65_RS00480	0.73	-0.2
115,157	-		DZA65_RS00480	0.73	+0.1
115,157	-		DZA65_RS00480	0.73	-0.3
115,157	-		DZA65_RS00480	0.73	+0.5
115,158	+		DZA65_RS00480	0.74	-1.1
115,158	+		DZA65_RS00480	0.74	-0.1
115,158	+		DZA65_RS00480	0.74	+0.4
115,158	+		DZA65_RS00480	0.74	-2.5
115,159	-		DZA65_RS00480	0.74	-1.8
115,159	-		DZA65_RS00480	0.74	+0.2
115,159	-		DZA65_RS00480	0.74	-1.7
115,171	+		DZA65_RS00480	0.74	+1.1
115,171	+		DZA65_RS00480	0.74	+0.1
115,171	+		DZA65_RS00480	0.74	+0.1
115,171	+		DZA65_RS00480	0.74	-2.4
115,171	+		DZA65_RS00480	0.74	-0.0
115,171	+		DZA65_RS00480	0.74	-0.5
115,172	-		DZA65_RS00480	0.74	-0.3
115,179	+		DZA65_RS00480	0.75	+0.8
115,180	-		DZA65_RS00480	0.75	+0.5
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