Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22345

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
4,833,027	-		DZA65_RS22340	0.34	-1.0
4,833,027	-		DZA65_RS22340	0.34	+0.5
4,833,027	-		DZA65_RS22340	0.34	+0.5
4,833,027	-		DZA65_RS22340	0.34	+0.7
4,833,027	-		DZA65_RS22340	0.34	+0.8
4,833,027	-		DZA65_RS22340	0.34	+1.8
4,833,027	-		DZA65_RS22340	0.34	-0.1
4,833,027	-		DZA65_RS22340	0.34	+1.0
4,833,027	-		DZA65_RS22340	0.34	+0.1
4,833,027	-		DZA65_RS22340	0.34	+0.8
4,833,027	-		DZA65_RS22340	0.34	+1.4
4,833,027	-		DZA65_RS22340	0.34	+1.3
4,833,027	-		DZA65_RS22340	0.34	+0.6
4,833,158	+		DZA65_RS22340	0.42	+1.0
4,833,158	+		DZA65_RS22340	0.42	+0.2
4,833,158	+		DZA65_RS22340	0.42	-1.7
4,833,158	+		DZA65_RS22340	0.42	+0.7
4,833,158	+		DZA65_RS22340	0.42	-1.1
4,833,158	+		DZA65_RS22340	0.42	+1.4
4,833,159	-		DZA65_RS22340	0.42	+0.5
4,833,179	-				-0.1
4,833,187	+		DZA65_RS22340	0.44	+1.3
4,833,187	+		DZA65_RS22340	0.44	+0.6
4,833,187	+				+0.6
4,833,187	+		DZA65_RS22340	0.44	-0.4
4,833,187	+		DZA65_RS22340	0.44	+1.2
4,833,187	+		DZA65_RS22340	0.44	-0.1
4,833,187	+		DZA65_RS22340	0.44	+1.2
4,833,188	-		DZA65_RS22340	0.44	+0.4
4,833,188	-		DZA65_RS22340	0.44	+0.6
4,833,188	-		DZA65_RS22340	0.44	-0.4
4,833,188	-		DZA65_RS22340	0.44	+0.6
4,833,188	-		DZA65_RS22340	0.44	-0.2
4,833,188	-		DZA65_RS22340	0.44	-0.2
4,833,188	-		DZA65_RS22340	0.44	+0.4
4,833,188	-		DZA65_RS22340	0.44	+0.3
4,833,188	-		DZA65_RS22340	0.44	+0.7
4,833,189	+		DZA65_RS22340	0.44	+1.6
4,833,189	+		DZA65_RS22340	0.44	-0.7
4,833,189	+		DZA65_RS22340	0.44	+0.3
4,833,189	+		DZA65_RS22340	0.44	+1.6
4,833,189	+		DZA65_RS22340	0.44	+1.5
4,833,189	+		DZA65_RS22340	0.44	+1.3
4,833,189	+		DZA65_RS22340	0.44	+0.3
4,833,189	+		DZA65_RS22340	0.44	-0.7
4,833,189	+		DZA65_RS22340	0.44	+1.1
4,833,189	+		DZA65_RS22340	0.44	+1.0
4,833,189	+		DZA65_RS22340	0.44	+0.0
4,833,189	+		DZA65_RS22340	0.44	+1.3
4,833,189	+		DZA65_RS22340	0.44	-0.6
4,833,189	+		DZA65_RS22340	0.44	+0.3
4,833,190	-		DZA65_RS22340	0.44	+0.6
4,833,190	-		DZA65_RS22340	0.44	-1.4
4,833,190	-		DZA65_RS22340	0.44	+1.1
4,833,190	-		DZA65_RS22340	0.44	+1.0
4,833,190	-		DZA65_RS22340	0.44	+0.7
4,833,190	-		DZA65_RS22340	0.44	+0.8
4,833,190	-		DZA65_RS22340	0.44	+0.5
4,833,190	-		DZA65_RS22340	0.44	+0.4
4,833,190	-		DZA65_RS22340	0.44	+0.6
4,833,190	-		DZA65_RS22340	0.44	+1.1
4,833,190	-		DZA65_RS22340	0.44	-0.1
4,833,221	+		DZA65_RS22340	0.46	+2.6
4,833,221	+		DZA65_RS22340	0.46	+0.5
4,833,221	+		DZA65_RS22340	0.46	-0.2
4,833,221	+		DZA65_RS22340	0.46	+0.9
4,833,221	+		DZA65_RS22340	0.46	+0.8
4,833,222	-		DZA65_RS22340	0.47	-0.1
4,833,222	-		DZA65_RS22340	0.47	-0.1
4,833,222	-		DZA65_RS22340	0.47	-0.7
4,833,222	-		DZA65_RS22340	0.47	-0.1
4,833,222	-		DZA65_RS22340	0.47	+0.7
4,833,222	-		DZA65_RS22340	0.47	+0.2
4,833,263	+		DZA65_RS22340	0.49	-0.5
4,833,263	+		DZA65_RS22340	0.49	-1.1
4,833,263	+		DZA65_RS22340	0.49	+0.9
4,833,263	+		DZA65_RS22340	0.49	-0.2
4,833,263	+		DZA65_RS22340	0.49	+0.4
4,833,263	+		DZA65_RS22340	0.49	-0.4
4,833,263	+		DZA65_RS22340	0.49	+1.0
4,833,264	-		DZA65_RS22340	0.49	+1.4
4,833,264	-		DZA65_RS22340	0.49	+1.2
4,833,264	-		DZA65_RS22340	0.49	+0.6
4,833,264	-		DZA65_RS22340	0.49	-2.0
4,833,405	+		DZA65_RS22340	0.59	+1.2
4,833,405	+		DZA65_RS22340	0.59	+0.0
4,833,406	-		DZA65_RS22340	0.59	+0.6
4,833,406	-		DZA65_RS22340	0.59	+0.2
4,833,417	+		DZA65_RS22340	0.60	+0.4
4,833,417	+		DZA65_RS22340	0.60	+0.4
4,833,417	+		DZA65_RS22340	0.60	-0.2
4,833,417	+		DZA65_RS22340	0.60	+0.7
4,833,417	+		DZA65_RS22340	0.60	+1.4
4,833,417	+		DZA65_RS22340	0.60	-0.9
4,833,417	+		DZA65_RS22340	0.60	+1.1
4,833,417	+		DZA65_RS22340	0.60	+0.3
4,833,417	+		DZA65_RS22340	0.60	+0.8
4,833,418	-		DZA65_RS22340	0.60	+0.6
4,833,418	-		DZA65_RS22340	0.60	+1.8
4,833,418	-		DZA65_RS22340	0.60	+0.6
4,833,418	-		DZA65_RS22340	0.60	+0.4
4,833,418	-		DZA65_RS22340	0.60	-0.1
4,833,418	-		DZA65_RS22340	0.60	+0.6
4,833,418	-		DZA65_RS22340	0.60	+0.5
4,833,418	-		DZA65_RS22340	0.60	+0.3
4,833,418	-		DZA65_RS22340	0.60	-2.1
4,833,418	-		DZA65_RS22340	0.60	-1.2
4,833,418	-		DZA65_RS22340	0.60	-0.2
4,833,418	-		DZA65_RS22340	0.60	+1.0
4,833,418	-		DZA65_RS22340	0.60	-0.4
4,833,443	+		DZA65_RS22340	0.61	+0.3
4,833,444	-		DZA65_RS22340	0.61	+0.5
4,833,444	-		DZA65_RS22340	0.61	+1.5
4,833,444	-		DZA65_RS22340	0.61	+1.0
4,833,444	-		DZA65_RS22340	0.61	-0.0
4,833,444	-		DZA65_RS22340	0.61	+0.4
4,833,464	+		DZA65_RS22340	0.63	-0.0
4,833,464	+		DZA65_RS22340	0.63	-0.1
4,833,464	+		DZA65_RS22340	0.63	+0.8
4,833,465	-		DZA65_RS22340	0.63	-1.7
4,833,500	+		DZA65_RS22340	0.65	+1.7
4,833,500	+		DZA65_RS22340	0.65	+1.2
4,833,501	-		DZA65_RS22340	0.65	+1.6
4,833,647	+		DZA65_RS22340	0.75	-0.7
4,833,647	+		DZA65_RS22340	0.75	+1.2
4,833,647	+		DZA65_RS22340	0.75	-0.1
4,833,647	+		DZA65_RS22340	0.75	+1.6
4,833,647	+		DZA65_RS22340	0.75	+0.2
4,833,647	+		DZA65_RS22340	0.75	-0.1
4,833,648	-		DZA65_RS22340	0.75	+0.0
4,833,648	-		DZA65_RS22340	0.75	+1.1
4,833,648	-		DZA65_RS22340	0.75	-0.6
4,833,648	-		DZA65_RS22340	0.75	+0.3
4,833,648	-		DZA65_RS22340	0.75	+1.0
4,833,648	-		DZA65_RS22340	0.75	+0.6
4,833,655	-		DZA65_RS22340	0.75	+0.3
4,833,714	+		DZA65_RS22340	0.79	-0.8
4,833,715	-		DZA65_RS22340	0.79	+0.0
4,833,742	+		DZA65_RS22340	0.81	+0.0
4,833,743	-		DZA65_RS22340	0.81	-0.4
4,833,816	+		DZA65_RS22340	0.86	-1.4
4,833,816	+		DZA65_RS22340	0.86	-0.4
4,833,817	-		DZA65_RS22340	0.86	-1.7
4,833,872	+				+1.0
4,833,872	+				+1.8
4,833,873	-				+0.0
4,833,873	-				-0.2
4,833,873	-				+0.4
4,833,873	-				+0.6
4,833,999	+				-1.1
4,833,999	+				-0.5
4,833,999	+				+1.4
4,833,999	+				+0.2
4,833,999	+				-1.4
4,833,999	+				+1.0
4,833,999	+				+0.5
4,834,000	-				-0.0
4,834,000	-				+1.2
4,834,000	-				-1.0
4,834,000	-				+0.6
4,834,000	-				-0.8
4,834,000	-				-0.0
4,834,000	-				+0.4
4,834,000	-				+1.0
4,834,000	-				-0.4
4,834,000	-				-1.5
4,834,000	-				+0.5
4,834,000	-				+1.3
4,834,000	-				-1.2
4,834,000	-				-1.7
4,834,020	-				+0.8
4,834,020	-				-0.0
4,834,095	+				+0.6
4,834,095	+				+0.3
4,834,095	+				-0.7
4,834,095	+				-0.5
4,834,096	-				+1.4
4,834,137	+				-0.4
4,834,137	+				+1.0
4,834,138	-				-1.2
4,834,138	-				+0.6
4,834,138	-				+0.9
4,834,142	-				-0.1
4,834,142	-				+0.4
4,834,142	-				+1.4
4,834,212	+		DZA65_RS22345	0.13	-0.5
4,834,212	+		DZA65_RS22345	0.13	-0.3
4,834,212	+		DZA65_RS22345	0.13	+0.5
4,834,212	+		DZA65_RS22345	0.13	+0.6
4,834,212	+		DZA65_RS22345	0.13	+1.2
4,834,212	+		DZA65_RS22345	0.13	+1.1
4,834,212	+		DZA65_RS22345	0.13	+0.0
4,834,212	+		DZA65_RS22345	0.13	+1.0
4,834,212	+		DZA65_RS22345	0.13	+0.5
4,834,212	+		DZA65_RS22345	0.13	-0.9
4,834,212	+		DZA65_RS22345	0.13	-0.2
4,834,213	-		DZA65_RS22345	0.13	+0.4
4,834,213	-		DZA65_RS22345	0.13	-1.7
4,834,213	-		DZA65_RS22345	0.13	+1.2
4,834,213	-		DZA65_RS22345	0.13	+0.1
4,834,213	-		DZA65_RS22345	0.13	-0.2
4,834,213	-		DZA65_RS22345	0.13	+0.3
4,834,213	-		DZA65_RS22345	0.13	-0.4
4,834,213	-		DZA65_RS22345	0.13	+0.6
4,834,213	-		DZA65_RS22345	0.13	-1.8
4,834,213	-		DZA65_RS22345	0.13	-0.2
4,834,213	-		DZA65_RS22345	0.13	-0.3
4,834,213	-		DZA65_RS22345	0.13	+0.3
4,834,215	+		DZA65_RS22345	0.13	-1.5
4,834,215	+		DZA65_RS22345	0.13	+1.1
4,834,215	+		DZA65_RS22345	0.13	-0.4
4,834,215	+		DZA65_RS22345	0.13	+0.1
4,834,215	+		DZA65_RS22345	0.13	+1.6
4,834,215	+		DZA65_RS22345	0.13	-0.2
4,834,215	+		DZA65_RS22345	0.13	-0.8
4,834,215	+		DZA65_RS22345	0.13	+0.1
4,834,215	+		DZA65_RS22345	0.13	+0.7
4,834,215	+		DZA65_RS22345	0.13	-1.7
4,834,215	+		DZA65_RS22345	0.13	-0.8
4,834,216	-		DZA65_RS22345	0.13	-1.4
4,834,216	-		DZA65_RS22345	0.13	+0.6
4,834,216	-		DZA65_RS22345	0.13	+0.1
4,834,216	-		DZA65_RS22345	0.13	-0.5
4,834,216	-		DZA65_RS22345	0.13	+0.1
4,834,216	-		DZA65_RS22345	0.13	-1.2
4,834,216	-		DZA65_RS22345	0.13	-0.7
4,834,216	-		DZA65_RS22345	0.13	+0.4
4,834,216	-		DZA65_RS22345	0.13	+0.6
4,834,216	-		DZA65_RS22345	0.13	+1.3
4,834,255	+		DZA65_RS22345	0.15	+0.9
4,834,255	+		DZA65_RS22345	0.15	+0.7
4,834,256	-		DZA65_RS22345	0.16	+0.5
4,834,256	-		DZA65_RS22345	0.16	+2.6
4,834,326	+		DZA65_RS22345	0.20	-0.1
4,834,326	+		DZA65_RS22345	0.20	+1.6
4,834,326	+		DZA65_RS22345	0.20	+3.3
4,834,326	+		DZA65_RS22345	0.20	-1.1
4,834,326	+		DZA65_RS22345	0.20	+0.1
4,834,326	+		DZA65_RS22345	0.20	+1.4
4,834,326	+		DZA65_RS22345	0.20	+0.0
4,834,326	+		DZA65_RS22345	0.20	+0.3
4,834,326	+		DZA65_RS22345	0.20	-0.1
4,834,327	-		DZA65_RS22345	0.20	+0.2
4,834,327	-		DZA65_RS22345	0.20	-1.1
4,834,327	-		DZA65_RS22345	0.20	+0.3
4,834,327	-		DZA65_RS22345	0.20	-0.7
4,834,327	-		DZA65_RS22345	0.20	-1.2
4,834,327	-		DZA65_RS22345	0.20	-1.7
4,834,327	-		DZA65_RS22345	0.20	-1.7
4,834,327	-		DZA65_RS22345	0.20	+1.5
4,834,327	-		DZA65_RS22345	0.20	+0.2
4,834,327	-		DZA65_RS22345	0.20	-0.4
4,834,327	-		DZA65_RS22345	0.20	+0.9
4,834,327	-		DZA65_RS22345	0.20	+0.1
4,834,421	+		DZA65_RS22345	0.27	+0.1
4,834,421	+		DZA65_RS22345	0.27	+0.9
4,834,421	+		DZA65_RS22345	0.27	+1.4
4,834,421	+		DZA65_RS22345	0.27	-0.4
4,834,421	+				+0.6
4,834,421	+		DZA65_RS22345	0.27	+1.1
4,834,421	+		DZA65_RS22345	0.27	+0.5
4,834,421	+		DZA65_RS22345	0.27	+0.5
4,834,422	-		DZA65_RS22345	0.27	+0.7
4,834,422	-		DZA65_RS22345	0.27	+0.1
4,834,422	-		DZA65_RS22345	0.27	+0.6
4,834,422	-		DZA65_RS22345	0.27	+1.0
4,834,425	+		DZA65_RS22345	0.27	+1.0
4,834,425	+		DZA65_RS22345	0.27	+0.7
4,834,425	+		DZA65_RS22345	0.27	+0.6
4,834,425	+		DZA65_RS22345	0.27	-1.4
4,834,425	+		DZA65_RS22345	0.27	+0.5
4,834,425	+		DZA65_RS22345	0.27	-0.0
4,834,425	+		DZA65_RS22345	0.27	+0.2
4,834,425	+		DZA65_RS22345	0.27	-0.5
4,834,425	+		DZA65_RS22345	0.27	+1.8
4,834,425	+		DZA65_RS22345	0.27	+1.2
4,834,425	+		DZA65_RS22345	0.27	-0.2
4,834,425	+		DZA65_RS22345	0.27	+1.3
4,834,425	+		DZA65_RS22345	0.27	+2.6
4,834,426	-		DZA65_RS22345	0.27	+0.6
4,834,426	-		DZA65_RS22345	0.27	+0.9
4,834,426	-		DZA65_RS22345	0.27	+0.5
4,834,426	-		DZA65_RS22345	0.27	+0.9
4,834,426	-		DZA65_RS22345	0.27	+0.4
4,834,426	-		DZA65_RS22345	0.27	-0.4
4,834,426	-		DZA65_RS22345	0.27	+0.5
4,834,426	-		DZA65_RS22345	0.27	+0.9
4,834,426	-		DZA65_RS22345	0.27	+0.5
4,834,426	-		DZA65_RS22345	0.27	+0.8
4,834,426	-		DZA65_RS22345	0.27	-0.4
4,834,426	-		DZA65_RS22345	0.27	-0.2
4,834,426	-		DZA65_RS22345	0.27	+0.8
4,834,426	-		DZA65_RS22345	0.27	+0.0
4,834,426	-		DZA65_RS22345	0.27	+0.2
4,834,426	-		DZA65_RS22345	0.27	+1.0
4,834,426	-		DZA65_RS22345	0.27	+1.1
4,834,426	-		DZA65_RS22345	0.27	+0.8
4,834,426	-		DZA65_RS22345	0.27	+1.3
4,834,426	-		DZA65_RS22345	0.27	+0.4
4,834,426	-		DZA65_RS22345	0.27	+0.1
4,834,426	-		DZA65_RS22345	0.27	+3.5
4,834,658	+		DZA65_RS22345	0.43	-0.2
4,834,658	+		DZA65_RS22345	0.43	-0.0
4,834,658	+		DZA65_RS22345	0.43	-0.4
4,834,658	+		DZA65_RS22345	0.43	-0.5
4,834,659	-		DZA65_RS22345	0.43	+0.0
4,834,659	-		DZA65_RS22345	0.43	-0.2
4,834,760	+		DZA65_RS22345	0.50	+2.2
4,834,760	+		DZA65_RS22345	0.50	+0.3
4,834,760	+		DZA65_RS22345	0.50	+0.9
4,834,760	+		DZA65_RS22345	0.50	+1.2
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