Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19770

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
4,279,896	+		DZA65_RS19760	0.47	+0.9
4,279,896	+		DZA65_RS19760	0.47	-0.2
4,279,897	-		DZA65_RS19760	0.47	-0.7
4,280,079	+		DZA65_RS19760	0.67	-1.1
4,280,079	+		DZA65_RS19760	0.67	-0.5
4,280,079	+		DZA65_RS19760	0.67	-1.6
4,280,080	-		DZA65_RS19760	0.67	+0.4
4,280,091	+		DZA65_RS19760	0.68	+0.5
4,280,092	-		DZA65_RS19760	0.69	+0.5
4,280,092	-		DZA65_RS19760	0.69	-0.2
4,280,101	+		DZA65_RS19760	0.69	-0.5
4,280,101	+		DZA65_RS19760	0.69	-0.2
4,280,101	+		DZA65_RS19760	0.69	+0.1
4,280,102	-		DZA65_RS19760	0.70	-1.5
4,280,102	-		DZA65_RS19760	0.70	-1.7
4,280,102	-		DZA65_RS19760	0.70	+0.8
4,280,102	-		DZA65_RS19760	0.70	-0.8
4,280,102	-		DZA65_RS19760	0.70	+2.4
4,280,102	-		DZA65_RS19760	0.70	-0.2
4,280,173	+		DZA65_RS19760	0.77	-1.3
4,280,174	-		DZA65_RS19760	0.77	+0.7
4,280,174	-		DZA65_RS19760	0.77	+0.0
4,280,174	-		DZA65_RS19760	0.77	-0.4
4,280,175	+		DZA65_RS19760	0.77	+0.5
4,280,260	+		DZA65_RS19760	0.87	-0.1
4,280,260	+		DZA65_RS19760	0.87	+0.2
4,280,260	+		DZA65_RS19760	0.87	-0.0
4,280,261	-		DZA65_RS19760	0.87	-0.8
4,280,261	-		DZA65_RS19760	0.87	-0.6
4,280,261	-		DZA65_RS19760	0.87	-0.3
4,280,261	-		DZA65_RS19760	0.87	+0.4
4,280,261	-		DZA65_RS19760	0.87	+0.7
4,280,297	+				-1.2
4,280,297	+				-0.5
4,280,298	-				-0.3
4,280,298	-				+0.3
4,280,310	-				-1.1
4,280,416	-				-0.3
4,280,418	+				-0.8
4,280,418	+				-1.1
4,280,418	+				-0.5
4,280,418	+				+0.3
4,280,418	+				-2.7
4,280,418	+				+0.8
4,280,418	+				+0.3
4,280,418	+				-1.8
4,280,418	+				-2.1
4,280,418	+				+0.2
4,280,418	+				+0.5
4,280,419	-				+0.5
4,280,419	-				-0.5
4,280,419	-				+1.0
4,280,419	-				-0.2
4,280,419	-				+0.6
4,280,419	-				+1.9
4,280,419	-				+1.0
4,280,419	-				-1.5
4,280,419	-				+0.1
4,280,419	-				+0.5
4,280,419	-				+1.8
4,280,419	-				+0.2
4,280,419	-				+0.9
4,280,419	-				+0.1
4,280,419	-				-0.6
4,280,419	-				-0.5
4,280,419	-				-0.4
4,280,419	-				-1.1
4,280,419	-				+0.9
4,280,420	+				-0.8
4,280,420	+				+1.2
4,280,421	-				-0.8
4,280,421	-				-0.2
4,280,421	-				-0.2
4,280,421	-				+0.5
4,280,443	+				+1.5
4,280,443	+				+0.0
4,280,444	-				+1.5
4,280,444	-				-1.4
4,280,444	-				+0.4
4,280,444	-				+0.0
4,280,444	-				+0.7
4,280,444	-				+1.0
4,280,449	+				-1.4
4,280,450	-				+0.9
4,280,450	-				+1.3
4,280,454	+				+1.5
4,280,454	+				-0.3
4,280,454	+				-0.1
4,280,455	-				+0.1
4,280,455	-				-0.1
4,280,455	-				-0.3
4,280,632	-				-0.9
4,280,744	+				-0.1
4,280,744	+				+0.0
4,280,745	-				-0.4
4,280,745	-				+1.8
4,280,746	+				-1.2
4,280,747	-				+1.4
4,280,747	-				+0.4
4,280,747	-				-2.3
4,280,747	-				-1.7
4,280,750	-				+0.6
4,280,750	-				+0.5
4,280,789	-				-0.2
4,280,803	+				-2.5
4,280,803	+				+0.5
4,280,803	+				-0.5
4,280,804	-				-0.3
4,280,804	-				-0.1
4,280,804	-				+0.3
4,280,804	-				-0.5
4,280,804	-				-1.8
4,280,804	-				+0.0
4,280,863	+				+0.8
4,280,863	+				-0.8
4,280,863	+				-1.1
4,280,864	-				-1.5
4,280,871	+				-1.1
4,280,874	+				+0.7
4,280,874	+				-1.6
4,280,874	+				-0.3
4,280,874	+				+0.5
4,280,875	-				+0.4
4,280,875	-				-2.2
4,280,875	-				+0.7
4,280,875	-				-2.5
4,280,875	-				-1.4
4,280,875	-				+1.6
4,280,875	-				+0.9
4,280,875	-				-0.1
4,281,021	+		DZA65_RS19770	0.22	-0.5
4,281,021	+		DZA65_RS19770	0.22	-0.8
4,281,021	+		DZA65_RS19770	0.22	+0.5
4,281,022	-		DZA65_RS19770	0.22	+1.3
4,281,022	-		DZA65_RS19770	0.22	+1.5
4,281,114	+		DZA65_RS19770	0.34	+0.4
4,281,114	+		DZA65_RS19770	0.34	+1.1
4,281,114	+		DZA65_RS19770	0.34	-1.3
4,281,114	+		DZA65_RS19770	0.34	-0.8
4,281,114	+		DZA65_RS19770	0.34	+0.9
4,281,114	+		DZA65_RS19770	0.34	+1.7
4,281,114	+		DZA65_RS19770	0.34	-1.2
4,281,114	+		DZA65_RS19770	0.34	+1.3
4,281,114	+		DZA65_RS19770	0.34	-1.7
4,281,115	-		DZA65_RS19770	0.34	-0.5
4,281,115	-		DZA65_RS19770	0.34	+0.8
4,281,115	-		DZA65_RS19770	0.34	-1.9
4,281,115	-		DZA65_RS19770	0.34	-3.4
4,281,115	-		DZA65_RS19770	0.34	+0.2
4,281,115	-		DZA65_RS19770	0.34	-0.9
4,281,115	-		DZA65_RS19770	0.34	+0.0
4,281,115	-		DZA65_RS19770	0.34	+0.5
4,281,194	-		DZA65_RS19770	0.45	+0.2
4,281,206	+		DZA65_RS19770	0.47	-1.1
4,281,206	+		DZA65_RS19770	0.47	-0.4
4,281,207	-		DZA65_RS19770	0.47	-1.0
4,281,300	-		DZA65_RS19770	0.59	-1.1
4,281,300	-		DZA65_RS19770	0.59	+0.5
4,281,300	-		DZA65_RS19770	0.59	-1.1
4,281,390	-		DZA65_RS19770	0.72	+0.2
4,281,390	-		DZA65_RS19770	0.72	+0.7
4,281,404	+		DZA65_RS19770	0.73	-1.3
4,281,432	+		DZA65_RS19770	0.77	-2.2
4,281,518	+		DZA65_RS19770	0.89	-0.4
4,281,519	-		DZA65_RS19770	0.89	-2.1
4,281,519	-		DZA65_RS19770	0.89	+0.3
4,281,567	-				+0.8
4,281,567	-				-1.3
4,281,748	+		DZA65_RS19775	0.40	+2.8
4,281,748	+		DZA65_RS19775	0.40	-0.4
4,281,748	+		DZA65_RS19775	0.40	-1.7
4,281,748	+		DZA65_RS19775	0.40	+1.4
4,281,748	+		DZA65_RS19775	0.40	-1.8
4,281,748	+		DZA65_RS19775	0.40	-1.0
4,281,749	-		DZA65_RS19775	0.40	-0.7
4,281,749	-		DZA65_RS19775	0.40	+0.5
4,281,749	-		DZA65_RS19775	0.40	-0.6
4,281,749	-		DZA65_RS19775	0.40	+0.2
4,281,749	-		DZA65_RS19775	0.40	-1.2
4,281,824	-		DZA65_RS19775	0.62	-2.4
4,281,824	-		DZA65_RS19775	0.62	-1.5
4,281,824	-		DZA65_RS19775	0.62	-0.6
4,281,824	-		DZA65_RS19775	0.62	+0.0
4,281,829	-		DZA65_RS19775	0.63	-0.8
4,281,861	-		DZA65_RS19775	0.72	+0.5
4,281,956	+				+0.8
4,281,956	+				-0.0
4,281,956	+				-0.2
4,281,956	+				+0.8
4,281,956	+				-0.5
4,281,956	+				+1.2
4,281,956	+				-0.1
4,281,956	+				-0.1
4,281,956	+				+0.8
4,281,956	+				+0.5
4,281,957	-				-0.2
4,281,957	-				-0.0
4,281,957	-				+0.8
4,281,957	-				-0.7
4,281,957	-				-0.6
4,281,957	-				+1.8
4,281,957	-				-0.5
4,281,957	-				-2.3
4,281,960	+				-0.2
4,281,960	+				-1.1
4,281,960	+				-0.3
4,281,960	+				+0.1
4,281,960	+				-1.4
4,281,961	-				+0.0
4,281,961	-				+0.3
4,281,961	-				-2.1
4,281,961	-				+0.8
4,281,961	-				+1.5
4,281,961	-				+0.1
4,281,963	+				+1.1
4,281,963	+				+0.5
4,281,973	-				-0.6
4,281,973	-				-0.2
4,282,059	+		DZA65_RS19780	0.14	+2.1
4,282,059	+		DZA65_RS19780	0.14	+1.0
4,282,059	+		DZA65_RS19780	0.14	+0.8
4,282,059	+		DZA65_RS19780	0.14	-1.3
4,282,059	+		DZA65_RS19780	0.14	-0.5
4,282,059	+		DZA65_RS19780	0.14	-0.5
4,282,059	+		DZA65_RS19780	0.14	-2.4
4,282,059	+		DZA65_RS19780	0.14	+0.4
4,282,059	+		DZA65_RS19780	0.14	-2.1
4,282,059	+		DZA65_RS19780	0.14	+0.3
4,282,059	+		DZA65_RS19780	0.14	-1.7
4,282,059	+		DZA65_RS19780	0.14	-0.4
4,282,060	-		DZA65_RS19780	0.14	+1.1
4,282,060	-		DZA65_RS19780	0.14	-0.1
4,282,060	-		DZA65_RS19780	0.14	-1.3
4,282,060	-		DZA65_RS19780	0.14	+0.4
4,282,060	-		DZA65_RS19780	0.14	-3.1
4,282,060	-		DZA65_RS19780	0.14	+0.9
4,282,060	-		DZA65_RS19780	0.14	-0.1
4,282,060	-		DZA65_RS19780	0.14	+1.0
4,282,060	-		DZA65_RS19780	0.14	+0.3
4,282,060	-		DZA65_RS19780	0.14	+0.9
4,282,060	-		DZA65_RS19780	0.14	+0.3
4,282,072	+		DZA65_RS19780	0.16	+0.5
4,282,072	+				+2.8
4,282,073	-		DZA65_RS19780	0.16	-0.5
4,282,107	+		DZA65_RS19780	0.21	+0.2
4,282,107	+		DZA65_RS19780	0.21	-1.1
4,282,107	+		DZA65_RS19780	0.21	-2.1
4,282,107	+		DZA65_RS19780	0.21	-0.8
4,282,107	+		DZA65_RS19780	0.21	+1.7
4,282,107	+		DZA65_RS19780	0.21	+0.8
4,282,107	+		DZA65_RS19780	0.21	+1.8
4,282,107	+		DZA65_RS19780	0.21	+0.0
4,282,107	+		DZA65_RS19780	0.21	+3.1
4,282,108	-		DZA65_RS19780	0.21	-0.5
4,282,108	-		DZA65_RS19780	0.21	-1.6
4,282,108	-		DZA65_RS19780	0.21	-0.1
4,282,108	-		DZA65_RS19780	0.21	+0.4
4,282,108	-		DZA65_RS19780	0.21	-0.3
4,282,147	+		DZA65_RS19780	0.27	-0.5
4,282,147	+		DZA65_RS19780	0.27	+0.1
4,282,147	+		DZA65_RS19780	0.27	-0.4
4,282,148	-		DZA65_RS19780	0.27	+0.9
4,282,153	+		DZA65_RS19780	0.27	+0.8
4,282,195	+		DZA65_RS19780	0.33	+0.5
4,282,195	+		DZA65_RS19780	0.33	-0.3
4,282,195	+		DZA65_RS19780	0.33	-0.4
4,282,195	+		DZA65_RS19780	0.33	+1.0
4,282,195	+		DZA65_RS19780	0.33	-1.1
4,282,196	-		DZA65_RS19780	0.34	+0.2
4,282,196	-		DZA65_RS19780	0.34	-0.2
4,282,196	-		DZA65_RS19780	0.34	-0.2
4,282,196	-		DZA65_RS19780	0.34	-1.1
4,282,196	-		DZA65_RS19780	0.34	+0.9
4,282,196	-		DZA65_RS19780	0.34	-0.3
4,282,196	-		DZA65_RS19780	0.34	-0.4
4,282,196	-		DZA65_RS19780	0.34	+0.5
4,282,196	-		DZA65_RS19780	0.34	-1.8
4,282,196	-		DZA65_RS19780	0.34	-0.1
4,282,199	+		DZA65_RS19780	0.34	-0.1
4,282,199	+		DZA65_RS19780	0.34	+1.5
4,282,199	+		DZA65_RS19780	0.34	-0.5
4,282,200	-		DZA65_RS19780	0.34	+0.1
4,282,200	-		DZA65_RS19780	0.34	-1.5
4,282,239	+		DZA65_RS19780	0.40	+0.3
4,282,239	+		DZA65_RS19780	0.40	-1.8
4,282,239	+		DZA65_RS19780	0.40	+2.8
4,282,239	+		DZA65_RS19780	0.40	+0.5
4,282,239	+		DZA65_RS19780	0.40	-0.9
4,282,239	+		DZA65_RS19780	0.40	+1.1
4,282,239	+		DZA65_RS19780	0.40	+0.6
4,282,239	+		DZA65_RS19780	0.40	+1.7
4,282,239	+		DZA65_RS19780	0.40	-0.2
4,282,239	+		DZA65_RS19780	0.40	-0.1
4,282,239	+		DZA65_RS19780	0.40	-0.7
4,282,239	+		DZA65_RS19780	0.40	-3.2
4,282,239	+		DZA65_RS19780	0.40	+1.5
4,282,239	+		DZA65_RS19780	0.40	+0.2
4,282,239	+		DZA65_RS19780	0.40	+0.2
4,282,239	+		DZA65_RS19780	0.40	-0.2
4,282,239	+		DZA65_RS19780	0.40	-0.4
4,282,239	+		DZA65_RS19780	0.40	+0.3
4,282,240	-		DZA65_RS19780	0.40	+1.5
4,282,240	-		DZA65_RS19780	0.40	-0.9
4,282,240	-		DZA65_RS19780	0.40	-0.5
4,282,240	-		DZA65_RS19780	0.40	+1.2
4,282,240	-		DZA65_RS19780	0.40	+0.0
4,282,240	-		DZA65_RS19780	0.40	+0.4
4,282,240	-		DZA65_RS19780	0.40	+0.5
4,282,240	-		DZA65_RS19780	0.40	-0.4
4,282,240	-		DZA65_RS19780	0.40	-1.5
4,282,240	-		DZA65_RS19780	0.40	-0.8
4,282,240	-		DZA65_RS19780	0.40	+0.5
4,282,240	-		DZA65_RS19780	0.40	-0.4
4,282,306	+		DZA65_RS19780	0.49	-1.0
4,282,320	+		DZA65_RS19780	0.51	+1.3
4,282,320	+		DZA65_RS19780	0.51	-1.4
4,282,372	+		DZA65_RS19780	0.59	+0.2
4,282,372	+		DZA65_RS19780	0.59	-0.2
4,282,372	+		DZA65_RS19780	0.59	+0.9
4,282,372	+		DZA65_RS19780	0.59	+0.0
4,282,372	+		DZA65_RS19780	0.59	-0.5
4,282,372	+		DZA65_RS19780	0.59	+0.3
4,282,372	+		DZA65_RS19780	0.59	+0.1
4,282,372	+		DZA65_RS19780	0.59	-0.2
4,282,373	-		DZA65_RS19780	0.59	-0.1
4,282,373	-		DZA65_RS19780	0.59	-0.5
4,282,373	-		DZA65_RS19780	0.59	-1.1
4,282,373	-		DZA65_RS19780	0.59	-0.4
4,282,373	-		DZA65_RS19780	0.59	-0.5
4,282,373	-		DZA65_RS19780	0.59	+0.1
4,282,418	+		DZA65_RS19780	0.66	-0.5
4,282,428	+		DZA65_RS19780	0.67	-0.1
4,282,428	+		DZA65_RS19780	0.67	-0.8
4,282,448	+		DZA65_RS19780	0.70	+0.3
4,282,448	+		DZA65_RS19780	0.70	-1.2
4,282,448	+		DZA65_RS19780	0.70	-0.7
4,282,449	-		DZA65_RS19780	0.70	-0.1
4,282,449	-		DZA65_RS19780	0.70	+0.5
4,282,449	-		DZA65_RS19780	0.70	+0.8
4,282,471	-		DZA65_RS19780	0.73	+0.5
4,282,479	+		DZA65_RS19780	0.74	+0.2
4,282,479	+		DZA65_RS19780	0.74	-1.1
4,282,480	-		DZA65_RS19780	0.74	+1.5
4,282,480	-		DZA65_RS19780	0.74	+0.5
4,282,493	+		DZA65_RS19780	0.76	-1.5
4,282,493	+		DZA65_RS19780	0.76	-0.3
4,282,494	-		DZA65_RS19780	0.76	-0.2
4,282,494	-		DZA65_RS19780	0.76	-0.2
4,282,511	-		DZA65_RS19780	0.79	-0.7
4,282,511	-		DZA65_RS19780	0.79	+0.8
4,282,556	+		DZA65_RS19780	0.85	+0.1
4,282,556	+		DZA65_RS19780	0.85	+1.7