Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14665

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
3,187,489	-		DZA65_RS14655	0.69	-1.8
3,187,523	+		DZA65_RS14655	0.73	-0.2
3,187,523	+		DZA65_RS14655	0.73	-0.3
3,187,677	-				-0.1
3,187,737	+				-2.3
3,187,737	+				-0.8
3,187,737	+				+1.0
3,187,737	+				-0.7
3,187,738	-				-0.5
3,187,822	+		DZA65_RS14660	0.13	-1.6
3,187,822	+		DZA65_RS14660	0.13	-0.0
3,187,822	+		DZA65_RS14660	0.13	+0.8
3,187,822	+		DZA65_RS14660	0.13	+0.1
3,187,822	+		DZA65_RS14660	0.13	-0.6
3,187,822	+		DZA65_RS14660	0.13	-1.4
3,187,822	+		DZA65_RS14660	0.13	-0.6
3,187,822	+		DZA65_RS14660	0.13	+0.4
3,187,823	-		DZA65_RS14660	0.13	-0.7
3,187,823	-		DZA65_RS14660	0.13	+0.5
3,187,823	-		DZA65_RS14660	0.13	-0.6
3,187,823	-		DZA65_RS14660	0.13	-2.4
3,188,016	+		DZA65_RS14660	0.46	-1.2
3,188,016	+		DZA65_RS14660	0.46	-0.2
3,188,016	+		DZA65_RS14660	0.46	-0.9
3,188,016	+		DZA65_RS14660	0.46	+0.1
3,188,016	+		DZA65_RS14660	0.46	+0.9
3,188,017	-		DZA65_RS14660	0.46	-0.4
3,188,017	-		DZA65_RS14660	0.46	+1.0
3,188,064	+		DZA65_RS14660	0.55	+0.4
3,188,065	-		DZA65_RS14660	0.55	-2.8
3,188,065	-		DZA65_RS14660	0.55	-0.2
3,188,065	-		DZA65_RS14660	0.55	-0.3
3,188,085	-		DZA65_RS14660	0.58	-0.1
3,188,176	-		DZA65_RS14660	0.74	-1.3
3,188,185	+		DZA65_RS14660	0.75	+0.4
3,188,185	+		DZA65_RS14660	0.75	+0.9
3,188,185	+		DZA65_RS14660	0.75	+1.4
3,188,185	+		DZA65_RS14660	0.75	-0.4
3,188,185	+		DZA65_RS14660	0.75	-0.8
3,188,185	+		DZA65_RS14660	0.75	+0.1
3,188,185	+		DZA65_RS14660	0.75	-0.3
3,188,185	+		DZA65_RS14660	0.75	-0.9
3,188,186	-		DZA65_RS14660	0.75	+1.2
3,188,186	-		DZA65_RS14660	0.75	+0.4
3,188,186	-		DZA65_RS14660	0.75	-0.1
3,188,186	-		DZA65_RS14660	0.75	+0.1
3,188,245	-		DZA65_RS14660	0.85	-0.0
3,188,245	-		DZA65_RS14660	0.85	+1.7
3,188,245	-		DZA65_RS14660	0.85	-0.6
3,188,245	-		DZA65_RS14660	0.85	-0.6
3,188,360	+				+1.1
3,188,361	-				-0.2
3,188,361	-				+0.9
3,188,361	-				-0.0
3,188,366	-				-0.6
3,188,398	-				+0.1
3,188,534	+		DZA65_RS14665	0.11	-0.3
3,188,534	+		DZA65_RS14665	0.11	-1.6
3,188,535	-		DZA65_RS14665	0.11	-2.6
3,188,535	-		DZA65_RS14665	0.11	+0.2
3,188,546	+		DZA65_RS14665	0.12	-2.2
3,188,546	+		DZA65_RS14665	0.12	-0.2
3,188,546	+		DZA65_RS14665	0.12	+0.3
3,188,547	-		DZA65_RS14665	0.12	-0.6
3,188,555	+		DZA65_RS14665	0.13	-0.8
3,188,555	+		DZA65_RS14665	0.13	-0.8
3,188,555	+		DZA65_RS14665	0.13	-0.2
3,188,555	+		DZA65_RS14665	0.13	-0.9
3,188,555	+		DZA65_RS14665	0.13	-0.9
3,188,556	-		DZA65_RS14665	0.13	+0.3
3,188,556	-		DZA65_RS14665	0.13	-0.5
3,188,556	-		DZA65_RS14665	0.13	-0.8
3,188,723	+		DZA65_RS14665	0.32	-1.6
3,188,723	+		DZA65_RS14665	0.32	-1.1
3,188,788	+		DZA65_RS14665	0.39	-1.9
3,188,813	+		DZA65_RS14665	0.42	-0.7
3,189,158	+		DZA65_RS14665	0.80	-0.3
3,189,158	+		DZA65_RS14665	0.80	-1.2
3,189,158	+		DZA65_RS14665	0.80	-2.2
3,189,175	-		DZA65_RS14665	0.82	-2.2
3,189,175	-		DZA65_RS14665	0.82	-0.8
3,189,185	+		DZA65_RS14665	0.83	-1.2
3,189,203	+		DZA65_RS14665	0.85	-0.2
3,189,203	+		DZA65_RS14665	0.85	-1.9
3,189,203	+		DZA65_RS14665	0.85	-1.2
3,189,203	+		DZA65_RS14665	0.85	+0.2
3,189,203	+		DZA65_RS14665	0.85	-0.6
3,189,204	-		DZA65_RS14665	0.85	-0.6
3,189,204	-		DZA65_RS14665	0.85	-1.8
3,189,204	-		DZA65_RS14665	0.85	-1.3
3,189,204	-		DZA65_RS14665	0.85	-1.2
3,189,204	-		DZA65_RS14665	0.85	+2.7
3,189,209	+		DZA65_RS14665	0.86	-0.1
3,189,209	+				+1.4
3,189,209	+		DZA65_RS14665	0.86	-1.6
3,189,210	-		DZA65_RS14665	0.86	-2.2
3,189,210	-		DZA65_RS14665	0.86	+0.4
3,189,210	-		DZA65_RS14665	0.86	-0.7
3,189,210	-		DZA65_RS14665	0.86	+0.1
3,189,210	-		DZA65_RS14665	0.86	-0.7
3,189,210	-				+2.5
3,189,210	-		DZA65_RS14665	0.86	-2.1
3,189,220	+		DZA65_RS14665	0.87	-1.3
3,189,253	+				+0.0
3,189,384	+				+0.8
3,189,405	+				-1.2
3,189,405	+				+0.1
3,189,415	+				-0.3
3,189,445	+				+0.8
3,189,445	+				-0.0
3,189,445	+				+0.0
3,189,446	-				-0.3
3,189,447	+				-0.5
3,189,448	-				-1.6
3,189,448	-				-0.3
3,189,476	+				-0.6
3,189,476	+				-2.2
3,189,482	+				-0.6
3,189,482	+				-0.9
3,189,483	-				+0.3
3,189,483	-				-0.4
3,189,525	-				+0.1
3,189,550	+				-0.6
3,189,550	+				+0.8
3,189,550	+				+0.4
3,189,550	+				+0.4
3,189,551	-				-1.8
3,189,551	-				-0.2
3,189,551	-				+1.2
3,189,551	-				-0.7
3,189,551	-				-0.4
3,189,551	-				-0.6
3,189,551	-				-1.4
3,189,566	+				+0.6
3,189,566	+				+0.6
3,189,567	-				-0.2
3,189,581	+				+0.5
3,189,581	+				-0.4
3,189,582	-				+0.9
3,189,582	-				-0.1
3,189,582	-				-0.6
3,189,582	-				+0.5
3,189,627	+				-0.3
3,189,645	+				+0.1
3,189,646	-				+1.2
3,189,709	+				-1.9
3,189,721	-				-1.0
3,189,789	+				+0.4
3,189,850	-				-1.6
3,189,864	+				-1.5
3,189,864	+				-0.8
3,189,865	-				+0.0
3,189,865	-				-1.2
3,189,865	-				+0.0
3,189,901	+				+0.8
3,189,901	+				-0.5
3,189,901	+				+0.5
3,189,901	+				+0.1
3,189,901	+				-0.6
3,189,901	+				+0.2
3,189,901	+				+0.5
3,189,901	+				-0.8
3,189,901	+				+1.1
3,189,901	+				+2.7
3,189,901	+				-0.3
3,189,901	+				-0.2
3,189,902	-				-1.9
3,189,902	-				-0.1
3,189,902	-				-0.2
3,189,902	-				-1.4
3,189,902	-				-0.3
3,189,902	-				+0.8
3,189,902	-				+0.4
3,189,902	-				+1.6
3,189,902	-				+0.6
3,189,902	-				+0.7
3,189,903	+				+0.1
3,189,903	+				+0.3
3,189,903	+				-0.1
3,189,903	+				+0.2
3,189,903	+				+0.2
3,189,904	-				-1.8
3,189,904	-				-1.9
3,189,904	-				-0.4
3,189,904	-				-1.6
3,189,904	-				+1.1
3,189,904	-				+0.1
3,189,936	+				-0.9
3,189,936	+				+0.1
3,189,936	+				-0.9
3,189,936	+				-0.9
3,189,936	+				-0.4
3,189,936	+				+1.1
3,189,936	+				+1.4
3,189,936	+				+0.4
3,189,937	-				-1.0
3,189,937	-				-0.2
3,189,937	-				+1.4
3,189,962	-				-1.3
3,189,962	-				-0.5
3,189,977	+				-0.5
3,189,977	+				+1.1
3,189,978	-				-1.1
3,189,978	-				+0.0
3,189,991	+				-1.8
3,189,991	+				+1.4
3,189,991	+				+0.8
3,189,992	-				+0.4
3,189,992	-				-0.6
3,189,992	-				-0.7
3,190,005	+				+0.4
3,190,006	-				+1.0
3,190,013	+				+0.7
3,190,014	-				+2.7
3,190,025	-				+1.4
3,190,032	+				+0.6
3,190,032	+				-0.4
3,190,056	+				-0.7
3,190,056	+				+1.0
3,190,056	+				-0.4
3,190,075	+				-1.0
3,190,076	-				-1.2
3,190,076	-				+0.4
3,190,090	-				-1.2
3,190,179	+				-0.6
3,190,179	+				-0.6
3,190,179	+				-1.6
3,190,179	+				-0.8
3,190,179	+				-0.9
3,190,179	+				+2.2
3,190,179	+				-0.5
3,190,180	-				-0.8
3,190,180	-				-1.8
3,190,180	-				-0.1
3,190,180	-				-1.3
3,190,180	-				+0.4
3,190,184	+				-0.0
3,190,184	+				-0.5
3,190,184	+				-1.9
3,190,185	-				-0.5
3,190,185	-				-0.6
3,190,185	-				-1.3
3,190,185	-				-0.9
3,190,185	-				-0.8
3,190,185	-				+1.6
3,190,185	-				+2.0
3,190,187	+				-0.9
3,190,187	+				-0.1
3,190,187	+				-0.1
3,190,188	-				+0.0
3,190,212	-				-0.9
3,190,234	+				+0.7
3,190,234	+				+1.6
3,190,234	+				-0.6
3,190,234	+				+0.2
3,190,234	+				+0.7
3,190,235	-				-0.0
3,190,235	-				-0.1
3,190,235	-				+0.2
3,190,235	-				+0.0
3,190,239	+				+0.2
3,190,239	+				+0.4
3,190,239	+				-0.8
3,190,239	+				+0.8
3,190,239	+				-0.6
3,190,239	+				+0.5
3,190,239	+				-0.1
3,190,240	-				-1.0
3,190,240	-				-0.1
3,190,240	-				-1.6
3,190,240	-				-0.5
3,190,240	-				-0.4
3,190,240	-				+0.4
3,190,240	-				+1.3
3,190,240	-				+1.8
3,190,240	-				-0.2
3,190,260	+				-0.9
3,190,260	+				-0.3
3,190,261	-				-2.6
3,190,270	+				+1.4
3,190,270	+				+1.0
3,190,290	+				-0.2
3,190,290	+				-0.7
3,190,290	+				+0.3
3,190,290	+				-0.8
3,190,304	+				-0.2
3,190,304	+				+0.8
3,190,304	+				+0.2
3,190,305	-				-1.7
3,190,305	-				+0.2
3,190,305	-				-0.7
3,190,313	+				-1.9
3,190,313	+				-0.5
3,190,313	+				+0.8
3,190,313	+				-1.2
3,190,313	+				+0.4
3,190,314	-				-0.1
3,190,314	-				+0.0
3,190,320	-				-0.8