Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08170

Experiment: PDB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PDB
1,707,142	+				-1.7
1,707,142	+		DZA65_RS08165	0.49	-0.4
1,707,142	+		DZA65_RS08165	0.49	-0.7
1,707,143	-		DZA65_RS08165	0.49	-0.4
1,707,143	-		DZA65_RS08165	0.49	-1.1
1,707,143	-		DZA65_RS08165	0.49	-2.5
1,707,143	-		DZA65_RS08165	0.49	-0.8
1,707,143	-		DZA65_RS08165	0.49	-1.3
1,707,154	-		DZA65_RS08165	0.50	+1.6
1,707,367	+		DZA65_RS08165	0.71	+0.6
1,707,368	-		DZA65_RS08165	0.71	-2.5
1,707,368	-		DZA65_RS08165	0.71	-1.7
1,707,408	-		DZA65_RS08165	0.75	+0.7
1,707,408	-		DZA65_RS08165	0.75	-0.3
1,707,463	+		DZA65_RS08165	0.80	-2.5
1,707,463	+		DZA65_RS08165	0.80	+0.6
1,707,464	-		DZA65_RS08165	0.80	+0.7
1,707,464	-				+0.3
1,707,496	+		DZA65_RS08165	0.83	+0.3
1,707,496	+		DZA65_RS08165	0.83	-0.4
1,707,496	+		DZA65_RS08165	0.83	+1.0
1,707,496	+				+0.3
1,707,496	+		DZA65_RS08165	0.83	-1.7
1,707,496	+		DZA65_RS08165	0.83	-0.7
1,707,496	+		DZA65_RS08165	0.83	+0.6
1,707,497	-		DZA65_RS08165	0.83	+0.1
1,707,497	-		DZA65_RS08165	0.83	-1.0
1,707,590	+				-0.2
1,707,590	+				-0.4
1,707,651	+				-0.9
1,707,651	+				-2.0
1,707,652	-				-0.1
1,707,652	-				-1.7
1,707,652	-				+0.2
1,707,709	+				+0.1
1,707,710	-				-0.1
1,707,710	-				-0.2
1,707,716	+				-0.5
1,707,716	+				+1.2
1,707,716	+				-1.3
1,707,716	+				-1.1
1,707,716	+				-0.5
1,707,716	+				-2.0
1,707,716	+				+0.3
1,707,716	+				+0.2
1,707,716	+				-0.5
1,707,716	+				-1.0
1,707,717	-				-1.3
1,707,717	-				+0.1
1,707,717	-				-0.7
1,707,717	-				+0.8
1,707,717	-				+0.7
1,707,717	-				-0.2
1,707,717	-				+0.3
1,707,717	-				-0.6
1,707,717	-				-0.0
1,707,718	+				+0.9
1,707,718	+				-0.3
1,707,718	+				+1.7
1,707,719	-				+0.8
1,707,719	-				-0.5
1,707,719	-				+0.4
1,707,719	-				+0.6
1,707,719	-				+0.3
1,707,719	-				+1.1
1,707,719	-				+0.3
1,707,903	+				+0.3
1,707,903	+				-1.3
1,707,904	-				-0.7
1,707,904	-				+0.2
1,707,904	-				-1.3
1,707,913	+				-2.3
1,707,914	-				+0.6
1,707,914	-				-2.7
1,707,925	+				-0.9
1,707,960	+				-0.3
1,707,964	+				+0.4
1,707,964	+				-1.0
1,707,965	-				+1.1
1,707,992	+				+0.9
1,707,997	-				+0.3
1,708,017	+				-1.9
1,708,018	-				+0.1
1,708,023	+				+0.3
1,708,044	+				+0.1
1,708,093	+				-0.8
1,708,094	-				-0.4
1,708,120	+				+0.3
1,708,120	+				+1.3
1,708,121	-				+0.6
1,708,128	-				+0.8
1,708,129	+				+0.4
1,708,148	+				+0.3
1,708,149	-				+0.4
1,708,149	-				-0.6
1,708,166	+				+0.7
1,708,167	-				+0.7
1,708,217	+				-2.0
1,708,217	+				+0.5
1,708,251	+				-0.2
1,708,252	-				+0.8
1,708,252	-				+0.6
1,708,283	+				+0.2
1,708,283	+				-0.2
1,708,284	-				+0.4
1,708,293	+				+0.3
1,708,293	+				+0.3
1,708,293	+				-0.3
1,708,293	+				+0.9
1,708,294	-				+0.6
1,708,294	-				-0.7
1,708,294	-				-0.2
1,708,294	-				-0.5
1,708,294	-				+0.5
1,708,294	-				+1.1
1,708,294	-				-1.0
1,708,323	+				-0.8
1,708,323	+				+0.9
1,708,323	+				-0.4
1,708,323	+				-2.0
1,708,324	-				-2.0
1,708,324	-				+0.4
1,708,324	-				+0.0
1,708,361	+				+0.0
1,708,361	+				-1.8
1,708,362	-				-0.4
1,708,412	-				+0.1
1,708,412	-				-0.7
1,708,440	+				+0.7
1,708,440	+				+0.2
1,708,440	+				-1.3
1,708,440	+				-1.3
1,708,440	+				+0.8
1,708,440	+				+0.3
1,708,440	+				-2.0
1,708,440	+				+0.2
1,708,440	+				+0.2
1,708,440	+				-0.4
1,708,440	+				-0.9
1,708,440	+				+1.1
1,708,441	-				+0.3
1,708,441	-				-0.1
1,708,441	-				+0.0
1,708,441	-				+0.3
1,708,441	-				+0.9
1,708,441	-				+1.1
1,708,441	-				+0.3
1,708,441	-				-0.7
1,708,441	-				+0.2
1,708,442	+				-0.7
1,708,442	+				-1.0
1,708,443	-				+0.6
1,708,443	-				-0.2
1,708,443	-				+0.3
1,708,650	-		DZA65_RS08170	0.17	+0.3
1,708,954	-		DZA65_RS08170	0.27	-1.5
1,709,040	+		DZA65_RS08170	0.30	+0.1
1,709,040	+		DZA65_RS08170	0.30	+0.1
1,709,040	+		DZA65_RS08170	0.30	-0.6
1,709,041	-		DZA65_RS08170	0.30	+0.0
1,709,041	-		DZA65_RS08170	0.30	+0.3
1,709,041	-		DZA65_RS08170	0.30	-0.7
1,709,041	-		DZA65_RS08170	0.30	-0.9
1,709,052	+		DZA65_RS08170	0.30	+0.5
1,709,053	-		DZA65_RS08170	0.30	+0.0
1,709,053	-		DZA65_RS08170	0.30	-1.7
1,709,053	-		DZA65_RS08170	0.30	+0.0
1,709,055	-		DZA65_RS08170	0.30	-0.8
1,709,115	+		DZA65_RS08170	0.32	+0.7
1,709,115	+		DZA65_RS08170	0.32	-0.0
1,709,116	-		DZA65_RS08170	0.32	-0.3
1,709,136	+		DZA65_RS08170	0.33	-0.0
1,709,137	-		DZA65_RS08170	0.33	-1.0
1,709,137	-		DZA65_RS08170	0.33	+0.7
1,709,137	-		DZA65_RS08170	0.33	+0.3
1,709,157	+		DZA65_RS08170	0.33	+1.0
1,709,157	+		DZA65_RS08170	0.33	+0.0
1,709,157	+		DZA65_RS08170	0.33	-0.1
1,709,157	+		DZA65_RS08170	0.33	-1.4
1,709,158	-		DZA65_RS08170	0.33	-0.2
1,709,299	-		DZA65_RS08170	0.38	+0.3
1,709,361	+		DZA65_RS08170	0.40	-0.7
1,709,361	+		DZA65_RS08170	0.40	-0.3
1,709,361	+		DZA65_RS08170	0.40	+0.0
1,709,361	+		DZA65_RS08170	0.40	-1.4
1,709,361	+		DZA65_RS08170	0.40	-3.1
1,709,362	-		DZA65_RS08170	0.40	-0.0
1,709,362	-		DZA65_RS08170	0.40	+0.3
1,709,362	-		DZA65_RS08170	0.40	+0.8
1,709,499	+		DZA65_RS08170	0.45	+1.3
1,709,500	-		DZA65_RS08170	0.45	-2.0
1,709,500	-		DZA65_RS08170	0.45	-2.0
1,709,538	+		DZA65_RS08170	0.46	+0.3
1,709,538	+		DZA65_RS08170	0.46	+0.8
1,709,539	-		DZA65_RS08170	0.46	+1.5
1,709,539	-		DZA65_RS08170	0.46	-0.2
1,709,539	-		DZA65_RS08170	0.46	-0.5
1,709,539	-		DZA65_RS08170	0.46	-0.8
1,709,539	-		DZA65_RS08170	0.46	-0.2
1,709,539	-		DZA65_RS08170	0.46	-1.1
1,709,539	-		DZA65_RS08170	0.46	-1.7
1,709,540	+		DZA65_RS08170	0.46	+0.1
1,709,540	+		DZA65_RS08170	0.46	-1.5
1,709,540	+		DZA65_RS08170	0.46	+0.3
1,709,540	+		DZA65_RS08170	0.46	+0.3
1,709,541	-		DZA65_RS08170	0.46	-0.7
1,709,541	-		DZA65_RS08170	0.46	+0.3
1,709,541	-		DZA65_RS08170	0.46	+0.3
1,709,541	-		DZA65_RS08170	0.46	-0.1
1,709,541	-		DZA65_RS08170	0.46	-0.1
1,709,541	-		DZA65_RS08170	0.46	-0.5
1,709,541	-		DZA65_RS08170	0.46	+0.3
1,709,541	-		DZA65_RS08170	0.46	-0.3
1,709,580	+		DZA65_RS08170	0.47	+0.8
1,709,580	+		DZA65_RS08170	0.47	-0.1
1,709,581	-		DZA65_RS08170	0.47	+0.0
1,709,581	-		DZA65_RS08170	0.47	+0.8
1,709,581	-		DZA65_RS08170	0.47	-2.7
1,709,581	-		DZA65_RS08170	0.47	+0.1
1,709,581	-		DZA65_RS08170	0.47	-0.6
1,709,593	+		DZA65_RS08170	0.48	+1.0
1,709,593	+		DZA65_RS08170	0.48	-1.4
1,709,593	+		DZA65_RS08170	0.48	-0.3
1,709,594	-		DZA65_RS08170	0.48	+0.0
1,709,594	-		DZA65_RS08170	0.48	-0.5
1,709,594	-		DZA65_RS08170	0.48	+0.4
1,709,628	+		DZA65_RS08170	0.49	-0.0
1,709,628	+		DZA65_RS08170	0.49	+0.1
1,709,628	+		DZA65_RS08170	0.49	-1.0
1,709,628	+		DZA65_RS08170	0.49	-0.4
1,709,629	-		DZA65_RS08170	0.49	+0.4
1,709,629	-		DZA65_RS08170	0.49	-1.3
1,709,629	-		DZA65_RS08170	0.49	-0.4
1,709,629	-		DZA65_RS08170	0.49	+1.3
1,709,629	-		DZA65_RS08170	0.49	+1.3
1,709,712	+		DZA65_RS08170	0.52	+0.8
1,709,713	-		DZA65_RS08170	0.52	-0.4
1,709,742	+		DZA65_RS08170	0.53	+1.4
1,709,742	+		DZA65_RS08170	0.53	+0.2
1,709,742	+		DZA65_RS08170	0.53	+1.9
1,709,743	-		DZA65_RS08170	0.53	+0.3
1,709,793	+		DZA65_RS08170	0.54	+0.6
1,709,793	+		DZA65_RS08170	0.54	+0.7
1,709,793	+		DZA65_RS08170	0.54	+1.7
1,709,793	+		DZA65_RS08170	0.54	-1.7
1,709,794	-		DZA65_RS08170	0.54	+0.9
1,709,871	+		DZA65_RS08170	0.57	+0.7
1,709,871	+		DZA65_RS08170	0.57	+0.2
1,709,871	+		DZA65_RS08170	0.57	-0.3
1,709,871	+		DZA65_RS08170	0.57	+0.2
1,709,871	+		DZA65_RS08170	0.57	-0.3
1,709,871	+		DZA65_RS08170	0.57	+0.3
1,709,871	+		DZA65_RS08170	0.57	+0.2
1,709,871	+		DZA65_RS08170	0.57	+0.3
1,709,871	+		DZA65_RS08170	0.57	+0.7
1,709,872	-		DZA65_RS08170	0.57	+1.2
1,709,872	-		DZA65_RS08170	0.57	+0.7
1,709,872	-		DZA65_RS08170	0.57	-0.5
1,709,872	-		DZA65_RS08170	0.57	+0.3
1,709,872	-		DZA65_RS08170	0.57	+0.3
1,709,909	+		DZA65_RS08170	0.58	+0.4
1,709,909	+		DZA65_RS08170	0.58	+0.3
1,709,910	-		DZA65_RS08170	0.58	-1.1
1,709,910	-		DZA65_RS08170	0.58	+1.3
1,709,910	-		DZA65_RS08170	0.58	+0.0
1,709,937	-		DZA65_RS08170	0.59	+0.9
1,710,014	+		DZA65_RS08170	0.61	-0.7
1,710,014	+		DZA65_RS08170	0.61	+0.1
1,710,171	-		DZA65_RS08170	0.67	+0.0
1,710,183	+		DZA65_RS08170	0.67	+1.1
1,710,183	+		DZA65_RS08170	0.67	-0.7
1,710,184	-		DZA65_RS08170	0.67	-0.5
1,710,184	-		DZA65_RS08170	0.67	+0.4
1,710,184	-		DZA65_RS08170	0.67	+1.8
1,710,354	+		DZA65_RS08170	0.73	-0.3
1,710,355	-		DZA65_RS08170	0.73	+0.2
1,710,355	-		DZA65_RS08170	0.73	+0.6
1,710,362	+		DZA65_RS08170	0.73	+0.1
1,710,425	+		DZA65_RS08170	0.75	+1.2
1,710,471	+		DZA65_RS08170	0.76	-0.7
1,710,471	+		DZA65_RS08170	0.76	-1.0
1,710,687	+		DZA65_RS08170	0.84	-2.5
1,710,688	-		DZA65_RS08170	0.84	+0.6
1,710,688	-		DZA65_RS08170	0.84	+1.9
1,710,807	+		DZA65_RS08170	0.88	+0.6
1,710,822	+		DZA65_RS08170	0.88	+2.0
1,710,822	+		DZA65_RS08170	0.88	-1.1
1,710,823	-		DZA65_RS08170	0.88	-1.5
1,710,823	-		DZA65_RS08170	0.88	+0.7
1,710,823	-		DZA65_RS08170	0.88	+0.0
1,710,823	-		DZA65_RS08170	0.88	+0.3
1,710,823	-		DZA65_RS08170	0.88	+0.3
1,710,823	-		DZA65_RS08170	0.88	+0.3
1,710,823	-		DZA65_RS08170	0.88	-0.8
1,710,823	-		DZA65_RS08170	0.88	+0.7
1,710,975	+				+1.3
1,710,976	-				+0.2
1,711,152	+				+0.3
1,711,152	+				-1.1
1,711,152	+				+0.5
1,711,153	-				+0.0
1,711,185	+				-0.4
1,711,185	+				+0.1
1,711,186	-				-1.3
1,711,191	+				-0.9
1,711,192	-				-1.3
1,711,199	+				-1.3
1,711,199	+				+0.3
1,711,199	+				+0.6
1,711,200	-				+0.9
1,711,220	+				+0.3
1,711,220	+				+2.1
1,711,221	-				+0.3
1,711,223	+				-1.3
1,711,223	+				-0.7
1,711,223	+				-1.3
1,711,277	+				+0.3
1,711,277	+				+1.4
1,711,282	-				-1.7
1,711,298	+		DZA65_RS08175	0.11	+1.2
1,711,298	+		DZA65_RS08175	0.11	-1.1
1,711,299	-		DZA65_RS08175	0.11	+0.3
1,711,325	+		DZA65_RS08175	0.14	+0.5
1,711,396	-		DZA65_RS08175	0.22	+0.4
1,711,488	-		DZA65_RS08175	0.32	+0.7
1,711,488	-		DZA65_RS08175	0.32	-0.5
1,711,499	+		DZA65_RS08175	0.33	-0.1
1,711,499	+		DZA65_RS08175	0.33	+0.3
1,711,499	+		DZA65_RS08175	0.33	+0.7
1,711,499	+		DZA65_RS08175	0.33	+0.1
1,711,500	-		DZA65_RS08175	0.33	-0.0
1,711,500	-		DZA65_RS08175	0.33	+0.0
1,711,500	-		DZA65_RS08175	0.33	-0.2
1,711,500	-		DZA65_RS08175	0.33	+0.5
1,711,500	-		DZA65_RS08175	0.33	-0.3
1,711,554	-		DZA65_RS08175	0.39	+0.7
1,711,560	+		DZA65_RS08175	0.40	+0.7
1,711,561	-		DZA65_RS08175	0.40	-0.9
1,711,561	-		DZA65_RS08175	0.40	+0.9
1,711,612	-		DZA65_RS08175	0.45	+1.3
1,711,679	+		DZA65_RS08175	0.53	+0.5
1,711,679	+		DZA65_RS08175	0.53	+0.3
1,711,679	+		DZA65_RS08175	0.53	+0.7
1,711,679	+		DZA65_RS08175	0.53	+0.1
1,711,680	-		DZA65_RS08175	0.53	-0.8
1,711,680	-		DZA65_RS08175	0.53	-1.5
1,711,680	-		DZA65_RS08175	0.53	+0.2
1,711,680	-		DZA65_RS08175	0.53	+0.1
1,711,681	-		DZA65_RS08175	0.53	+0.3
1,711,840	-		DZA65_RS08175	0.70	+0.8
1,711,875	+		DZA65_RS08175	0.74	-1.0
1,711,875	+		DZA65_RS08175	0.74	-0.0
1,711,875	+		DZA65_RS08175	0.74	+0.3
1,711,875	+		DZA65_RS08175	0.74	-0.8
1,711,875	+		DZA65_RS08175	0.74	-2.0
1,711,875	+		DZA65_RS08175	0.74	-0.9
1,711,875	+		DZA65_RS08175	0.74	-0.5
1,711,875	+		DZA65_RS08175	0.74	-0.4
1,711,875	+		DZA65_RS08175	0.74	-0.1
1,711,875	+		DZA65_RS08175	0.74	+0.4
1,711,875	+		DZA65_RS08175	0.74	-0.7
1,711,875	+		DZA65_RS08175	0.74	+0.2
1,711,875	+		DZA65_RS08175	0.74	+0.9
1,711,875	+		DZA65_RS08175	0.74	-1.5
1,711,875	+		DZA65_RS08175	0.74	+1.3
1,711,875	+		DZA65_RS08175	0.74	+2.2
1,711,875	+		DZA65_RS08175	0.74	+0.0
1,711,875	+		DZA65_RS08175	0.74	+0.6
1,711,875	+		DZA65_RS08175	0.74	+0.0
1,711,875	+		DZA65_RS08175	0.74	+0.5
1,711,876	-		DZA65_RS08175	0.74	-1.3
1,711,876	-		DZA65_RS08175	0.74	-0.7
1,711,876	-		DZA65_RS08175	0.74	+1.6
1,711,876	-		DZA65_RS08175	0.74	+1.1
1,711,876	-		DZA65_RS08175	0.74	+1.6
1,711,876	-		DZA65_RS08175	0.74	-0.8
1,711,876	-		DZA65_RS08175	0.74	+1.3
1,711,876	-		DZA65_RS08175	0.74	+1.2
1,711,876	-		DZA65_RS08175	0.74	-0.5
1,711,876	-		DZA65_RS08175	0.74	+0.0
1,711,876	-		DZA65_RS08175	0.74	+0.5
1,711,876	-		DZA65_RS08175	0.74	-1.7
1,711,876	-		DZA65_RS08175	0.74	+0.0
1,711,876	-		DZA65_RS08175	0.74	-1.0
1,711,876	-		DZA65_RS08175	0.74	+0.7
1,711,876	-		DZA65_RS08175	0.74	-0.7
1,711,876	-		DZA65_RS08175	0.74	-0.9
1,712,025	+				+0.6
1,712,025	+				-0.0
1,712,025	+				+0.1
1,712,026	-				+0.0
1,712,026	-				-0.2
1,712,026	-				-0.2
1,712,026	-				-1.3
1,712,026	-				+0.8
1,712,026	-				+0.1
1,712,026	-				-0.7
1,712,096	+				+0.5
1,712,096	+				+0.5
1,712,096	+				-1.7
1,712,096	+				-2.7
1,712,096	+				-0.7
1,712,096	+				-0.0
1,712,097	-				-0.4
1,712,097	-				+0.2
1,712,097	-				-1.1
1,712,097	-				+0.1
1,712,097	-				+0.2
1,712,097	-				-0.8
1,712,097	-				-0.6
1,712,106	+				+1.2
1,712,107	-				-0.1
1,712,168	+		DZA65_RS08180	0.10	+0.6
1,712,169	-		DZA65_RS08180	0.11	-0.1
1,712,169	-		DZA65_RS08180	0.11	+0.3
1,712,169	-		DZA65_RS08180	0.11	+0.1
1,712,169	-		DZA65_RS08180	0.11	-0.1