Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14320

Experiment: Upstate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDDA3937_RS14315 and DDA3937_RS14320 overlap by 4 nucleotidesDDA3937_RS14320 and DDA3937_RS14325 are separated by 2 nucleotides DDA3937_RS14315: DDA3937_RS14315 - NADH-quinone oxidoreductase subunit NuoF, at 3,282,113 to 3,283,462 _RS14315 DDA3937_RS14320: DDA3937_RS14320 - NADH-quinone oxidoreductase subunit NuoE, at 3,283,459 to 3,283,989 _RS14320 DDA3937_RS14325: DDA3937_RS14325 - NADH-quinone oxidoreductase subunit C/D, at 3,283,992 to 3,285,791 _RS14325 Position (kb) 3283 3284Strain fitness (log2 ratio) -1 0 1at 3283.617 kb on + strand, within DDA3937_RS14320

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Per-strain Table

Position Strand Gene LocusTag Fraction Upstate
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3,283,617 + DDA3937_RS14320 0.30 -0.5

Or see this region's nucleotide sequence