Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16950

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,851,895	-		DDA3937_RS16945	0.70	+0.7
3,851,946	+		DDA3937_RS16945	0.73	+0.1
3,851,947	-		DDA3937_RS16945	0.73	-0.7
3,851,947	-		DDA3937_RS16945	0.73	-1.8
3,852,115	+		DDA3937_RS16945	0.82	-1.4
3,852,118	-		DDA3937_RS16945	0.83	+0.4
3,852,118	-		DDA3937_RS16945	0.83	-0.8
3,852,226	+		DDA3937_RS16945	0.88	-2.0
3,852,245	+		DDA3937_RS16945	0.89	+0.3
3,852,322	-				-1.3
3,852,491	+				-1.8
3,852,509	-				+0.5
3,852,525	+				-1.1
3,852,525	+				-1.3
3,852,525	+				-1.4
3,852,526	-				+0.1
3,852,526	-				+5.5
3,852,527	+				-0.2
3,852,527	+				-0.2
3,852,527	+				+0.4
3,852,527	+				-0.2
3,852,527	+				-0.5
3,852,527	+				-0.1
3,852,527	+				+0.3
3,852,527	+				-2.2
3,852,527	+				-1.8
3,852,527	+				-0.3
3,852,527	+				-0.0
3,852,528	-				+0.8
3,852,528	-				-0.8
3,852,528	-				-1.0
3,852,528	-				-1.1
3,852,528	-				-1.0
3,852,528	-				-0.3
3,852,528	-				+0.3
3,852,528	-				-0.3
3,852,528	-				+0.0
3,852,528	-				+0.1
3,852,528	-				-0.8
3,852,532	+				+0.0
3,852,532	+				-1.3
3,852,532	+				-0.9
3,852,533	-				-0.0
3,852,547	+				+0.8
3,852,554	+				-1.0
3,852,554	+				-1.1
3,852,555	-				-1.3
3,852,555	-				-2.4
3,852,575	+				+0.7
3,852,576	-				+0.4
3,852,592	-				+0.7
3,852,623	-				-1.1
3,852,623	-				-1.1
3,852,655	+				+0.8
3,852,656	-				+0.1
3,852,660	+				+0.5
3,852,661	-				+0.9
3,852,692	-				+1.3
3,852,692	-				-0.0
3,852,693	+				+1.0
3,852,693	+				+1.1
3,852,694	-				-2.1
3,852,728	+				-1.0
3,852,728	+				+1.0
3,852,729	-				+1.7
3,852,729	-				+0.7
3,852,729	-				-0.7
3,852,729	-				-3.0
3,852,729	-				-0.0
3,852,768	-				+1.4
3,852,940	-		DDA3937_RS16950	0.12	-1.9
3,852,986	-		DDA3937_RS16950	0.15	-1.7
3,852,988	-		DDA3937_RS16950	0.15	+2.2
3,853,096	-		DDA3937_RS16950	0.21	+1.4
3,853,111	+		DDA3937_RS16950	0.22	+0.3
3,853,111	+		DDA3937_RS16950	0.22	-0.2
3,853,111	+		DDA3937_RS16950	0.22	+0.9
3,853,112	-		DDA3937_RS16950	0.22	+0.1
3,853,112	-		DDA3937_RS16950	0.22	-1.0
3,853,112	-		DDA3937_RS16950	0.22	+1.0
3,853,227	-		DDA3937_RS16950	0.29	-0.7
3,853,382	-		DDA3937_RS16950	0.38	+1.1
3,853,382	-		DDA3937_RS16950	0.38	-2.4
3,853,382	-		DDA3937_RS16950	0.38	+0.4
3,853,382	-		DDA3937_RS16950	0.38	+0.2
3,853,549	+		DDA3937_RS16950	0.48	+1.4
3,853,549	+		DDA3937_RS16950	0.48	+0.1
3,853,550	-		DDA3937_RS16950	0.48	+2.2
3,853,564	-		DDA3937_RS16950	0.49	-0.4
3,853,564	-		DDA3937_RS16950	0.49	-0.9
3,853,860	+		DDA3937_RS16950	0.66	-0.1
3,853,860	+		DDA3937_RS16950	0.66	+0.3
3,853,860	+		DDA3937_RS16950	0.66	+0.3
3,853,861	-		DDA3937_RS16950	0.66	-0.8
3,853,861	-		DDA3937_RS16950	0.66	-1.4
3,853,861	-		DDA3937_RS16950	0.66	-1.5
3,853,861	-		DDA3937_RS16950	0.66	-1.1
3,853,861	-		DDA3937_RS16950	0.66	-1.6
3,853,908	+		DDA3937_RS16950	0.69	+0.3
3,853,979	+		DDA3937_RS16950	0.73	-0.9
3,853,980	-		DDA3937_RS16950	0.73	-0.5
3,854,167	-		DDA3937_RS16950	0.84	+0.9
3,854,167	-		DDA3937_RS16950	0.84	+1.1
3,854,214	+		DDA3937_RS16950	0.87	-1.3
3,854,227	+		DDA3937_RS16950	0.88	-0.5
3,854,267	+		DDA3937_RS16950	0.90	-0.5
3,854,436	+				+0.9
3,854,620	+		DDA3937_RS16955	0.11	-0.7
3,854,620	+		DDA3937_RS16955	0.11	+0.2
3,854,621	-		DDA3937_RS16955	0.11	-0.3
3,854,621	-		DDA3937_RS16955	0.11	-0.7
3,854,621	-		DDA3937_RS16955	0.11	+1.1
3,854,621	-		DDA3937_RS16955	0.11	-1.2
3,854,805	+		DDA3937_RS16955	0.25	+0.7
3,854,805	+		DDA3937_RS16955	0.25	-0.5
3,854,905	+		DDA3937_RS16955	0.33	-0.3
3,854,905	+		DDA3937_RS16955	0.33	+0.6
3,854,905	+		DDA3937_RS16955	0.33	-0.9
3,854,905	+		DDA3937_RS16955	0.33	-1.4
3,854,905	+		DDA3937_RS16955	0.33	-0.7
3,854,905	+		DDA3937_RS16955	0.33	+1.3
3,854,905	+		DDA3937_RS16955	0.33	-0.4
3,854,906	-		DDA3937_RS16955	0.33	+7.3
3,854,951	-		DDA3937_RS16955	0.36	-0.3
3,854,951	-		DDA3937_RS16955	0.36	-1.5
3,854,973	+		DDA3937_RS16955	0.38	+0.8
3,854,973	+		DDA3937_RS16955	0.38	-1.3
3,854,974	-		DDA3937_RS16955	0.38	-0.5
3,854,990	-		DDA3937_RS16955	0.39	+0.2
3,855,046	+		DDA3937_RS16955	0.44	+0.3
3,855,046	+		DDA3937_RS16955	0.44	-0.8
3,855,047	-		DDA3937_RS16955	0.44	-0.5
3,855,047	-		DDA3937_RS16955	0.44	-2.0
3,855,047	-		DDA3937_RS16955	0.44	-1.1
3,855,047	-		DDA3937_RS16955	0.44	+0.7
3,855,049	+		DDA3937_RS16955	0.44	-0.3
3,855,049	+		DDA3937_RS16955	0.44	+0.1
3,855,049	+		DDA3937_RS16955	0.44	+0.4
3,855,050	-		DDA3937_RS16955	0.44	-0.4
3,855,128	-		DDA3937_RS16955	0.50	+0.1
3,855,128	-		DDA3937_RS16955	0.50	+1.8
3,855,182	+		DDA3937_RS16955	0.54	+0.7
3,855,182	+		DDA3937_RS16955	0.54	-0.5
3,855,182	+				+7.9
3,855,182	+		DDA3937_RS16955	0.54	-0.3
3,855,182	+		DDA3937_RS16955	0.54	+0.9
3,855,183	-		DDA3937_RS16955	0.54	-1.1
3,855,183	-		DDA3937_RS16955	0.54	-1.4
3,855,183	-		DDA3937_RS16955	0.54	-2.1
3,855,183	-		DDA3937_RS16955	0.54	-0.3
3,855,184	+		DDA3937_RS16955	0.54	-0.1
3,855,184	+		DDA3937_RS16955	0.54	-0.4
3,855,184	+		DDA3937_RS16955	0.54	+0.3
3,855,184	+		DDA3937_RS16955	0.54	-0.9
3,855,184	+		DDA3937_RS16955	0.54	-1.9
3,855,184	+		DDA3937_RS16955	0.54	-0.2
3,855,184	+		DDA3937_RS16955	0.54	-0.1
3,855,184	+		DDA3937_RS16955	0.54	-0.7
3,855,184	+		DDA3937_RS16955	0.54	-1.8
3,855,184	+		DDA3937_RS16955	0.54	-0.5
3,855,184	+		DDA3937_RS16955	0.54	-1.7
3,855,184	+		DDA3937_RS16955	0.54	-2.7
3,855,184	+		DDA3937_RS16955	0.54	+1.9
3,855,184	+		DDA3937_RS16955	0.54	-1.2
3,855,184	+		DDA3937_RS16955	0.54	-1.8
3,855,184	+		DDA3937_RS16955	0.54	-0.1
3,855,184	+		DDA3937_RS16955	0.54	+0.5
3,855,184	+		DDA3937_RS16955	0.54	+0.1
3,855,185	-		DDA3937_RS16955	0.54	+2.1
3,855,185	-		DDA3937_RS16955	0.54	-1.6
3,855,185	-		DDA3937_RS16955	0.54	-1.4
3,855,185	-		DDA3937_RS16955	0.54	-2.1
3,855,185	-		DDA3937_RS16955	0.54	+3.0
3,855,185	-		DDA3937_RS16955	0.54	+0.9
3,855,185	-		DDA3937_RS16955	0.54	-1.5
3,855,185	-		DDA3937_RS16955	0.54	+0.5
3,855,185	-		DDA3937_RS16955	0.54	-0.3
3,855,185	-		DDA3937_RS16955	0.54	+0.7
3,855,185	-		DDA3937_RS16955	0.54	-0.3
3,855,185	-		DDA3937_RS16955	0.54	+2.1
3,855,185	-		DDA3937_RS16955	0.54	+1.1
3,855,185	-		DDA3937_RS16955	0.54	+0.4
3,855,185	-		DDA3937_RS16955	0.54	+1.2
3,855,185	-		DDA3937_RS16955	0.54	-0.7
3,855,185	-		DDA3937_RS16955	0.54	-1.0
3,855,185	-		DDA3937_RS16955	0.54	-1.9
3,855,185	-		DDA3937_RS16955	0.54	-0.3
3,855,185	-		DDA3937_RS16955	0.54	-0.6
3,855,185	-		DDA3937_RS16955	0.54	-0.7
3,855,247	+		DDA3937_RS16955	0.59	+0.4
3,855,247	+				+3.2
3,855,247	+		DDA3937_RS16955	0.59	+0.2
3,855,247	+		DDA3937_RS16955	0.59	-1.2
3,855,248	-		DDA3937_RS16955	0.59	-0.3
3,855,263	+		DDA3937_RS16955	0.60	-0.5
3,855,263	+		DDA3937_RS16955	0.60	-0.7
3,855,349	+		DDA3937_RS16955	0.67	-0.4
3,855,349	+		DDA3937_RS16955	0.67	+0.2
3,855,349	+		DDA3937_RS16955	0.67	-0.2
3,855,349	+		DDA3937_RS16955	0.67	+1.9
3,855,349	+		DDA3937_RS16955	0.67	+1.7
3,855,349	+		DDA3937_RS16955	0.67	-0.7
3,855,349	+		DDA3937_RS16955	0.67	-0.3
3,855,349	+		DDA3937_RS16955	0.67	-0.9
3,855,349	+		DDA3937_RS16955	0.67	+0.2
3,855,349	+		DDA3937_RS16955	0.67	+0.3
3,855,350	-		DDA3937_RS16955	0.67	+1.2
3,855,350	-		DDA3937_RS16955	0.67	-0.3
3,855,350	-		DDA3937_RS16955	0.67	+2.1
3,855,350	-		DDA3937_RS16955	0.67	-1.0
3,855,350	-		DDA3937_RS16955	0.67	-0.7
3,855,352	+		DDA3937_RS16955	0.67	-0.1
3,855,352	+		DDA3937_RS16955	0.67	-0.4
3,855,352	+		DDA3937_RS16955	0.67	+1.6
3,855,352	+		DDA3937_RS16955	0.67	+0.9
3,855,353	-		DDA3937_RS16955	0.67	+2.2
3,855,353	-		DDA3937_RS16955	0.67	+0.3
3,855,353	-		DDA3937_RS16955	0.67	-0.3
3,855,353	-		DDA3937_RS16955	0.67	+0.4
3,855,353	-		DDA3937_RS16955	0.67	-0.2
3,855,353	-		DDA3937_RS16955	0.67	-1.4