Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07845

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,771,392	+				-1.1
1,771,392	+				-0.6
1,771,392	+				-0.8
1,771,393	-				-1.5
1,771,393	-				+0.5
1,771,393	-				-0.7
1,771,469	-				-1.1
1,771,478	-				+2.8
1,771,495	+				-0.5
1,771,496	-				-0.2
1,771,496	-				+2.3
1,771,501	+				+0.7
1,771,501	+				+0.8
1,771,502	-				+1.3
1,771,539	-				-0.1
1,771,539	-				-0.9
1,771,569	-				-1.6
1,771,569	-				-1.3
1,771,572	+				-1.1
1,771,572	+				-0.8
1,771,573	-				-1.3
1,771,573	-				-0.8
1,771,577	-				-0.7
1,771,577	-				-0.3
1,771,577	-				+3.3
1,771,590	+				-2.1
1,771,590	+				-1.6
1,771,590	+				-0.9
1,771,591	-				-1.0
1,771,644	-				-2.7
1,771,659	+				-0.1
1,771,660	-				+0.8
1,771,660	-				+0.3
1,771,667	+				-0.6
1,771,667	+				-0.7
1,771,667	+				-0.7
1,771,668	-				-1.3
1,771,668	-				+0.8
1,771,668	-				+0.5
1,771,668	-				-1.6
1,771,668	-				-0.6
1,771,668	-				-1.1
1,771,678	+				-0.2
1,771,719	+				-1.0
1,771,723	+				-0.6
1,771,736	-				-0.8
1,771,786	+				-0.2
1,771,814	+				+0.3
1,771,815	-				+0.1
1,771,815	-				-1.0
1,771,819	+				-1.5
1,771,819	+				+0.3
1,771,819	+				+0.3
1,771,952	+		DDA3937_RS07845	0.11	-0.3
1,771,954	+		DDA3937_RS07845	0.12	+2.1
1,771,955	-		DDA3937_RS07845	0.12	-0.3
1,771,958	-		DDA3937_RS07845	0.12	-1.9
1,771,958	-		DDA3937_RS07845	0.12	+2.3
1,771,969	-		DDA3937_RS07845	0.12	+1.3
1,771,984	+		DDA3937_RS07845	0.13	+0.6
1,771,988	+		DDA3937_RS07845	0.13	-0.0
1,771,988	+		DDA3937_RS07845	0.13	-2.8
1,771,989	-		DDA3937_RS07845	0.13	-0.8
1,771,989	-		DDA3937_RS07845	0.13	+0.0
1,771,989	-		DDA3937_RS07845	0.13	-1.6
1,771,989	-		DDA3937_RS07845	0.13	-0.1
1,771,989	-		DDA3937_RS07845	0.13	-1.7
1,772,058	+		DDA3937_RS07845	0.15	-0.0
1,772,087	+		DDA3937_RS07845	0.17	+1.6
1,772,087	+		DDA3937_RS07845	0.17	-0.7
1,772,087	+		DDA3937_RS07845	0.17	+0.0
1,772,087	+		DDA3937_RS07845	0.17	-0.5
1,772,088	-		DDA3937_RS07845	0.17	+2.1
1,772,088	-		DDA3937_RS07845	0.17	-0.7
1,772,088	-		DDA3937_RS07845	0.17	+0.4
1,772,103	+		DDA3937_RS07845	0.17	+0.6
1,772,132	-		DDA3937_RS07845	0.18	-0.6
1,772,366	+		DDA3937_RS07845	0.27	-1.6
1,772,366	+				+0.3
1,772,366	+		DDA3937_RS07845	0.27	+0.0
1,772,366	+		DDA3937_RS07845	0.27	+1.3
1,772,366	+		DDA3937_RS07845	0.27	+0.1
1,772,366	+		DDA3937_RS07845	0.27	-0.1
1,772,366	+		DDA3937_RS07845	0.27	-0.8
1,772,367	-		DDA3937_RS07845	0.27	-0.1
1,772,367	-		DDA3937_RS07845	0.27	+0.4
1,772,367	-		DDA3937_RS07845	0.27	-0.6
1,772,367	-		DDA3937_RS07845	0.27	+0.3
1,772,367	-		DDA3937_RS07845	0.27	-0.7
1,772,367	-		DDA3937_RS07845	0.27	-0.3
1,772,367	-		DDA3937_RS07845	0.27	-2.2
1,772,424	+		DDA3937_RS07845	0.30	-1.1
1,772,444	-		DDA3937_RS07845	0.30	+0.1
1,772,515	+		DDA3937_RS07845	0.33	+0.4
1,772,515	+		DDA3937_RS07845	0.33	-1.4
1,772,515	+		DDA3937_RS07845	0.33	-0.3
1,772,516	-		DDA3937_RS07845	0.33	-1.1
1,772,516	-		DDA3937_RS07845	0.33	+0.8
1,772,587	+		DDA3937_RS07845	0.36	-1.6
1,772,587	+		DDA3937_RS07845	0.36	-0.4
1,772,591	+		DDA3937_RS07845	0.36	-0.4
1,772,591	+		DDA3937_RS07845	0.36	-2.7
1,772,591	+		DDA3937_RS07845	0.36	+1.7
1,772,591	+		DDA3937_RS07845	0.36	+1.1
1,772,592	-		DDA3937_RS07845	0.36	+0.3
1,772,592	-		DDA3937_RS07845	0.36	-0.7
1,772,592	-		DDA3937_RS07845	0.36	-0.5
1,772,592	-		DDA3937_RS07845	0.36	-1.2
1,772,592	-		DDA3937_RS07845	0.36	+1.3
1,772,634	+		DDA3937_RS07845	0.38	+0.8
1,772,634	+		DDA3937_RS07845	0.38	+0.6
1,772,634	+		DDA3937_RS07845	0.38	+0.8
1,772,634	+		DDA3937_RS07845	0.38	-2.0
1,772,634	+		DDA3937_RS07845	0.38	-2.6
1,772,766	+		DDA3937_RS07845	0.43	-1.1
1,772,767	-		DDA3937_RS07845	0.43	-0.6
1,772,807	+		DDA3937_RS07845	0.44	+1.5
1,772,808	-		DDA3937_RS07845	0.44	-1.1
1,772,809	+		DDA3937_RS07845	0.44	-0.7
1,772,809	+		DDA3937_RS07845	0.44	-1.7
1,772,809	+		DDA3937_RS07845	0.44	-0.7
1,772,810	-		DDA3937_RS07845	0.44	+1.3
1,772,810	-		DDA3937_RS07845	0.44	-0.5
1,772,810	-				-0.1
1,772,810	-		DDA3937_RS07845	0.44	+0.3
1,772,871	-		DDA3937_RS07845	0.47	+0.7
1,772,908	+		DDA3937_RS07845	0.48	+0.8
1,772,909	-		DDA3937_RS07845	0.48	+0.6
1,772,909	-		DDA3937_RS07845	0.48	-0.1
1,772,995	+		DDA3937_RS07845	0.52	+0.8
1,772,995	+		DDA3937_RS07845	0.52	-0.6
1,772,995	+		DDA3937_RS07845	0.52	+1.3
1,772,996	-		DDA3937_RS07845	0.52	-2.1
1,772,996	-		DDA3937_RS07845	0.52	+1.4
1,772,996	-		DDA3937_RS07845	0.52	+0.9
1,772,996	-		DDA3937_RS07845	0.52	-0.3
1,773,026	-		DDA3937_RS07845	0.53	+0.5
1,773,026	-		DDA3937_RS07845	0.53	-1.1
1,773,035	-		DDA3937_RS07845	0.53	+2.0
1,773,035	-		DDA3937_RS07845	0.53	-0.8
1,773,035	-		DDA3937_RS07845	0.53	+1.8
1,773,133	+		DDA3937_RS07845	0.57	+1.3
1,773,133	+		DDA3937_RS07845	0.57	-1.1
1,773,292	+		DDA3937_RS07845	0.63	+0.7
1,773,293	-		DDA3937_RS07845	0.63	-0.6
1,773,326	+		DDA3937_RS07845	0.64	-0.0
1,773,326	+		DDA3937_RS07845	0.64	-1.2
1,773,327	-		DDA3937_RS07845	0.64	+1.3
1,773,490	+		DDA3937_RS07845	0.71	-1.1
1,773,490	+		DDA3937_RS07845	0.71	-1.4
1,773,491	-		DDA3937_RS07845	0.71	-1.1
1,773,510	+		DDA3937_RS07845	0.71	-0.3
1,773,510	+		DDA3937_RS07845	0.71	+0.8
1,773,511	-		DDA3937_RS07845	0.71	+0.9
1,773,518	+		DDA3937_RS07845	0.72	+0.5
1,773,518	+		DDA3937_RS07845	0.72	-0.0
1,773,518	+		DDA3937_RS07845	0.72	+0.6
1,773,519	-		DDA3937_RS07845	0.72	-0.6
1,773,596	-		DDA3937_RS07845	0.75	+1.6
1,773,605	-		DDA3937_RS07845	0.75	-0.9
1,773,659	+		DDA3937_RS07845	0.77	+0.2
1,773,660	-		DDA3937_RS07845	0.77	-1.2
1,773,678	+		DDA3937_RS07845	0.78	+0.1
1,773,678	+		DDA3937_RS07845	0.78	+0.7
1,773,782	-		DDA3937_RS07845	0.82	+0.0
1,773,793	+		DDA3937_RS07845	0.82	+0.2
1,773,793	+		DDA3937_RS07845	0.82	-0.2
1,773,793	+		DDA3937_RS07845	0.82	-1.8
1,773,793	+		DDA3937_RS07845	0.82	-1.2
1,773,793	+		DDA3937_RS07845	0.82	-0.9
1,773,793	+		DDA3937_RS07845	0.82	+1.3
1,773,793	+		DDA3937_RS07845	0.82	+1.3
1,773,793	+		DDA3937_RS07845	0.82	-0.2
1,773,793	+		DDA3937_RS07845	0.82	-1.7
1,773,794	-		DDA3937_RS07845	0.82	-1.7
1,773,794	-		DDA3937_RS07845	0.82	+1.3
1,773,794	-		DDA3937_RS07845	0.82	-0.8
1,773,794	-		DDA3937_RS07845	0.82	-0.5
1,773,794	-		DDA3937_RS07845	0.82	-2.1
1,773,794	-		DDA3937_RS07845	0.82	+1.1
1,773,794	-		DDA3937_RS07845	0.82	-2.7
1,773,794	-		DDA3937_RS07845	0.82	+0.9
1,773,794	-		DDA3937_RS07845	0.82	-0.1
1,773,794	-		DDA3937_RS07845	0.82	+1.4
1,773,794	-		DDA3937_RS07845	0.82	-0.9
1,773,888	+		DDA3937_RS07845	0.86	+1.3
1,773,888	+		DDA3937_RS07845	0.86	-1.7
1,773,888	+		DDA3937_RS07845	0.86	+0.0
1,773,888	+		DDA3937_RS07845	0.86	+5.2
1,773,888	+		DDA3937_RS07845	0.86	+0.3
1,773,888	+		DDA3937_RS07845	0.86	-0.2
1,773,889	-		DDA3937_RS07845	0.86	+0.7
1,773,889	-		DDA3937_RS07845	0.86	+0.0
1,773,889	-		DDA3937_RS07845	0.86	-1.6
1,773,889	-		DDA3937_RS07845	0.86	-0.3
1,773,906	+		DDA3937_RS07845	0.87	-0.3
1,773,919	+		DDA3937_RS07845	0.87	+2.1
1,773,920	-		DDA3937_RS07845	0.87	+1.6
1,773,920	-				+1.3
1,773,951	+		DDA3937_RS07845	0.88	+0.4
1,773,952	-		DDA3937_RS07845	0.88	+0.3
1,773,974	+		DDA3937_RS07845	0.89	+0.5
1,773,974	+		DDA3937_RS07845	0.89	-0.1
1,773,974	+		DDA3937_RS07845	0.89	-1.1
1,773,975	-		DDA3937_RS07845	0.89	-1.3
1,773,978	+		DDA3937_RS07845	0.89	+0.8
1,773,979	-		DDA3937_RS07845	0.89	-0.4
1,774,095	+				-1.0
1,774,095	+				-0.3
1,774,096	-				-0.8
1,774,158	-				-0.4
1,774,183	+				+0.1
1,774,184	-				-1.1
1,774,184	-				+2.3
1,774,189	+				-0.3
1,774,189	+				+0.1
1,774,190	-				-1.7
1,774,190	-				-0.8
1,774,190	-				-0.7
1,774,252	+				-0.9
1,774,253	-				+2.3
1,774,253	-				-0.1
1,774,351	-				-0.1
1,774,351	-				-1.1
1,774,363	+				-0.8
1,774,363	+				-0.8
1,774,364	-				-0.7
1,774,364	-				-2.2
1,774,368	-				+0.8
1,774,368	-				-0.6
1,774,394	+				+0.6
1,774,395	-				-1.1
1,774,395	-				-0.3
1,774,395	-				-0.4
1,774,395	-				-0.1
1,774,395	-				-0.7
1,774,422	+				-1.1
1,774,422	+				-0.6
1,774,423	-				+3.5
1,774,423	-				-1.1
1,774,423	-				-0.9
1,774,423	-				+0.8
1,774,469	+				-1.2
1,774,486	+				-0.7
1,774,486	+				+1.6
1,774,487	-				+1.3
1,774,487	-				-1.2
1,774,487	-				+1.4
1,774,487	-				+0.3
1,774,487	-				+0.1
1,774,487	-				+2.8
1,774,556	-				+0.3
1,774,564	+				+0.7
1,774,564	+				+0.1
1,774,568	+				-0.3
1,774,569	-				+0.0
1,774,569	-				-1.2
1,774,574	+				-2.2
1,774,574	+				-0.3
1,774,574	+				-1.9
1,774,574	+				-0.2
1,774,574	+				-1.9
1,774,575	-				-1.3
1,774,575	-				-0.7
1,774,575	-				+0.3
1,774,575	-				-2.6
1,774,575	-				-0.7
1,774,575	-				-0.4
1,774,622	-				-1.6
1,774,642	+				-1.7
1,774,642	+				-1.1
1,774,642	+				+0.3
1,774,642	+				-0.9
1,774,642	+				-2.7
1,774,642	+				+0.5
1,774,642	+				-2.7
1,774,642	+				+0.4
1,774,642	+				-1.7
1,774,643	-				-0.4
1,774,643	-				+1.0
1,774,643	-				-2.1
1,774,644	-				-0.7
1,774,646	-				-1.0
1,774,648	+				-1.6
1,774,648	+				-0.9
1,774,649	-				-1.2
1,774,657	-				-2.2
1,774,657	-				-1.1
1,774,698	-				+0.0
1,774,724	+				-2.5
1,774,724	+				-0.2
1,774,725	-				-0.7
1,774,725	-				+0.2
1,774,731	+				+0.3
1,774,731	+				-0.7
1,774,731	+				-1.7
1,774,731	+				-1.1
1,774,732	-				-2.0
1,774,753	-				-1.1
1,774,753	-				-0.3
1,774,771	-				-1.0
1,774,771	-				-0.7
1,774,800	+				-1.1
1,774,800	+				-1.7
1,774,801	-				+1.4
1,774,801	-				+0.2
1,774,855	+				+0.8
1,774,855	+				-0.3
1,774,856	-				+0.3
1,774,856	-				-1.7
1,774,856	-				+0.2
1,774,888	-				+0.3
1,774,897	+				-1.2
1,774,897	+				+0.6
1,774,898	-				-1.6
1,774,898	-				-1.1
1,774,898	-				+1.8
1,774,927	+				-2.1
1,774,927	+				-0.3
1,774,927	+				-0.2
1,775,015	+				-1.1
1,775,015	+				-1.3
1,775,015	+				-2.1
1,775,044	+				-0.3
1,775,045	-				-2.0
1,775,045	-				-1.7
1,775,045	-				-0.2
1,775,045	-				-1.2
1,775,045	-				-0.0
1,775,045	-				-2.1
1,775,072	-		DDA3937_RS07850	0.11	-0.7
1,775,100	+		DDA3937_RS07850	0.12	+0.8