Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS06755 and DDA3937_RS06760 are separated by 158 nucleotides DDA3937_RS06760 and DDA3937_RS06765 are separated by 423 nucleotides
DDA3937_RS06755: DDA3937_RS06755 - glycosyltransferase family 2 protein, at 1,510,117 to 1,511,010
_RS06755
DDA3937_RS06760: DDA3937_RS06760 - EpsG family protein, at 1,511,169 to 1,512,095
_RS06760
DDA3937_RS06765: DDA3937_RS06765 - DUF616 domain-containing protein, at 1,512,519 to 1,513,304
_RS06765
Position (kb)
1511
1512
1513 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1510.563 kb on + strand, within DDA3937_RS06755 at 1510.564 kb on - strand, within DDA3937_RS06755 at 1510.655 kb on + strand, within DDA3937_RS06755 at 1510.660 kb on + strand, within DDA3937_RS06755 at 1510.660 kb on + strand, within DDA3937_RS06755 at 1510.796 kb on - strand at 1511.099 kb on + strand at 1511.214 kb on - strand at 1511.368 kb on + strand, within DDA3937_RS06760 at 1511.374 kb on + strand, within DDA3937_RS06760 at 1511.384 kb on + strand, within DDA3937_RS06760 at 1511.386 kb on + strand, within DDA3937_RS06760 at 1511.386 kb on + strand, within DDA3937_RS06760 at 1511.485 kb on - strand, within DDA3937_RS06760 at 1511.536 kb on - strand, within DDA3937_RS06760 at 1511.729 kb on - strand, within DDA3937_RS06760 at 1511.754 kb on + strand, within DDA3937_RS06760 at 1511.827 kb on + strand, within DDA3937_RS06760 at 1511.829 kb on + strand, within DDA3937_RS06760 at 1511.829 kb on + strand, within DDA3937_RS06760 at 1511.975 kb on - strand, within DDA3937_RS06760 at 1512.148 kb on + strand at 1512.169 kb on + strand at 1512.216 kb on + strand at 1512.243 kb on - strand at 1512.551 kb on + strand at 1512.551 kb on + strand at 1512.771 kb on + strand, within DDA3937_RS06765 at 1512.771 kb on + strand, within DDA3937_RS06765 at 1512.772 kb on - strand, within DDA3937_RS06765 at 1512.877 kb on + strand, within DDA3937_RS06765 at 1512.941 kb on + strand, within DDA3937_RS06765 at 1512.941 kb on + strand, within DDA3937_RS06765 at 1512.943 kb on + strand, within DDA3937_RS06765
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 1,510,563 + DDA3937_RS06755 0.50 -2.4 1,510,564 - DDA3937_RS06755 0.50 -2.2 1,510,655 + DDA3937_RS06755 0.60 -1.4 1,510,660 + DDA3937_RS06755 0.61 +0.3 1,510,660 + DDA3937_RS06755 0.61 -1.2 1,510,796 - +1.4 1,511,099 + -0.4 1,511,214 - +0.4 1,511,368 + DDA3937_RS06760 0.21 -1.6 1,511,374 + DDA3937_RS06760 0.22 -0.7 1,511,384 + DDA3937_RS06760 0.23 -0.6 1,511,386 + DDA3937_RS06760 0.23 -3.6 1,511,386 + DDA3937_RS06760 0.23 +0.8 1,511,485 - DDA3937_RS06760 0.34 -0.9 1,511,536 - DDA3937_RS06760 0.40 -0.9 1,511,729 - DDA3937_RS06760 0.60 -1.2 1,511,754 + DDA3937_RS06760 0.63 -1.7 1,511,827 + DDA3937_RS06760 0.71 -0.4 1,511,829 + DDA3937_RS06760 0.71 +1.1 1,511,829 + DDA3937_RS06760 0.71 +0.7 1,511,975 - DDA3937_RS06760 0.87 +0.1 1,512,148 + +0.4 1,512,169 + +1.3 1,512,216 + -0.9 1,512,243 - +3.6 1,512,551 + -1.6 1,512,551 + -1.6 1,512,771 + DDA3937_RS06765 0.32 -1.9 1,512,771 + DDA3937_RS06765 0.32 -2.0 1,512,772 - DDA3937_RS06765 0.32 -0.9 1,512,877 + DDA3937_RS06765 0.46 -1.9 1,512,941 + DDA3937_RS06765 0.54 -1.0 1,512,941 + DDA3937_RS06765 0.54 -0.9 1,512,943 + DDA3937_RS06765 0.54 -1.1
Or see this region's nucleotide sequence