Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS02735 and DDA3937_RS02740 are separated by 324 nucleotides DDA3937_RS02740 and DDA3937_RS02745 are separated by 21 nucleotides DDA3937_RS02745 and DDA3937_RS02750 are separated by 78 nucleotides
DDA3937_RS02735: DDA3937_RS02735 - chaperonin GroEL, at 604,063 to 605,709
_RS02735
DDA3937_RS02740: DDA3937_RS02740 - chorismate lyase, at 606,034 to 606,549
_RS02740
DDA3937_RS02745: DDA3937_RS02745 - 4-hydroxybenzoate octaprenyltransferase, at 606,571 to 607,434
_RS02745
DDA3937_RS02750: DDA3937_RS02750 - glycerol-3-phosphate 1-O-acyltransferase PlsB, at 607,513 to 610,002
_RS02750
Position (kb) 606
607 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 605.708 kb on - strand at 605.708 kb on - strand at 605.708 kb on - strand at 605.708 kb on - strand at 605.708 kb on - strand at 605.794 kb on + strand at 605.831 kb on + strand at 605.831 kb on + strand at 605.831 kb on + strand at 605.831 kb on + strand at 605.831 kb on + strand at 605.831 kb on + strand at 605.831 kb on + strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.832 kb on - strand at 605.893 kb on + strand at 605.893 kb on + strand at 605.894 kb on - strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.951 kb on + strand at 605.952 kb on - strand at 605.965 kb on - strand at 605.965 kb on - strand at 605.987 kb on + strand at 605.988 kb on - strand at 606.003 kb on + strand at 606.003 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.031 kb on + strand at 606.132 kb on + strand, within DDA3937_RS02740 at 606.132 kb on + strand, within DDA3937_RS02740 at 606.296 kb on + strand, within DDA3937_RS02740 at 606.382 kb on + strand, within DDA3937_RS02740 at 606.523 kb on + strand at 606.527 kb on - strand at 607.432 kb on + strand at 607.432 kb on + strand at 607.432 kb on + strand at 607.432 kb on + strand at 607.432 kb on + strand at 607.432 kb on + strand at 607.432 kb on + strand at 607.433 kb on - strand at 607.450 kb on + strand at 607.450 kb on + strand at 607.456 kb on + strand at 607.456 kb on + strand at 607.457 kb on - strand at 607.457 kb on - strand at 607.475 kb on - strand at 607.515 kb on - strand at 607.520 kb on - strand at 607.520 kb on - strand at 607.520 kb on - strand at 607.520 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 605,708 - -0.8 605,708 - -0.9 605,708 - -2.5 605,708 - -1.0 605,708 - -1.4 605,794 + +0.8 605,831 + +0.5 605,831 + -1.0 605,831 + +0.2 605,831 + -0.2 605,831 + +1.4 605,831 + +3.3 605,831 + -2.1 605,832 - -0.1 605,832 - -1.4 605,832 - +1.3 605,832 - -0.5 605,832 - -2.5 605,832 - +1.5 605,832 - -0.8 605,832 - -0.2 605,832 - -2.1 605,832 - +0.4 605,832 - -0.4 605,832 - -0.2 605,893 + +2.2 605,893 + -1.4 605,894 - +2.0 605,951 + +0.5 605,951 + +2.7 605,951 + -0.1 605,951 + +0.6 605,951 + -0.3 605,951 + -0.8 605,951 + +0.5 605,951 + +0.2 605,951 + +0.5 605,951 + -0.2 605,952 - -1.0 605,965 - +0.2 605,965 - -0.1 605,987 + -0.9 605,988 - -2.1 606,003 + +1.5 606,003 + -0.5 606,031 + +2.4 606,031 + -0.9 606,031 + -2.2 606,031 + +0.6 606,031 + +0.2 606,031 + -0.5 606,031 + -0.2 606,031 + -0.0 606,031 + -0.4 606,031 + -0.8 606,132 + DDA3937_RS02740 0.19 -2.0 606,132 + DDA3937_RS02740 0.19 -2.6 606,296 + DDA3937_RS02740 0.51 +0.5 606,382 + DDA3937_RS02740 0.67 -0.9 606,523 + +1.0 606,527 - +0.0 607,432 + +1.7 607,432 + +0.1 607,432 + -2.5 607,432 + -1.0 607,432 + +0.8 607,432 + +0.7 607,432 + +3.9 607,433 - -0.0 607,450 + -0.5 607,450 + -0.3 607,456 + +0.6 607,456 + -0.8 607,457 - +0.5 607,457 - -1.2 607,475 - -0.2 607,515 - -1.4 607,520 - -0.8 607,520 - -1.5 607,520 - +0.5 607,520 - +0.4
Or see this region's nucleotide sequence