Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23455

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,749,981	+		DDA3937_RS20890	0.57	+1.6
4,749,986	+		DDA3937_RS20890	0.58	-1.2
4,749,987	-				+1.8
4,749,987	-		DDA3937_RS20890	0.58	+0.1
4,749,987	-		DDA3937_RS20890	0.58	-1.0
4,750,097	+		DDA3937_RS20890	0.66	-0.7
4,750,097	+		DDA3937_RS20890	0.66	+0.1
4,750,163	+		DDA3937_RS20890	0.71	-0.5
4,750,163	+		DDA3937_RS20890	0.71	-1.1
4,750,163	+		DDA3937_RS20890	0.71	-0.7
4,750,163	+		DDA3937_RS20890	0.71	+0.6
4,750,164	-		DDA3937_RS20890	0.71	-1.1
4,750,164	-		DDA3937_RS20890	0.71	-1.0
4,750,164	-		DDA3937_RS20890	0.71	-0.3
4,750,164	-		DDA3937_RS20890	0.71	+0.8
4,750,164	-		DDA3937_RS20890	0.71	-0.9
4,750,164	-		DDA3937_RS20890	0.71	+3.0
4,750,185	+		DDA3937_RS20890	0.72	+1.1
4,750,186	-		DDA3937_RS20890	0.72	+0.1
4,750,186	-		DDA3937_RS20890	0.72	-0.8
4,750,186	-		DDA3937_RS20890	0.72	-1.2
4,750,262	+		DDA3937_RS20890	0.78	-0.2
4,750,262	+		DDA3937_RS20890	0.78	-0.0
4,750,262	+		DDA3937_RS20890	0.78	-1.0
4,750,262	+		DDA3937_RS20890	0.78	-1.9
4,750,263	-		DDA3937_RS20890	0.78	+1.1
4,750,269	+		DDA3937_RS20890	0.79	-1.2
4,750,371	-		DDA3937_RS20890	0.86	-0.9
4,750,371	-		DDA3937_RS20890	0.86	-1.0
4,750,400	+		DDA3937_RS20890	0.88	-0.2
4,750,400	+		DDA3937_RS20890	0.88	-0.6
4,750,436	+				-0.2
4,750,436	+				-0.5
4,750,436	+				-2.2
4,750,437	-				-0.9
4,750,437	-				-0.3
4,750,437	-				-1.2
4,750,437	-				+1.4
4,750,442	+				-1.1
4,750,443	-				+0.3
4,750,557	+				+0.4
4,750,557	+				+0.7
4,750,557	+				+0.3
4,750,557	+				-0.6
4,750,557	+				-1.0
4,750,558	-				-0.6
4,750,558	-				+1.4
4,750,558	-				-0.9
4,750,558	-				-2.8
4,750,558	-				+0.2
4,750,561	+				-1.1
4,750,561	+				-0.8
4,750,561	+				+0.5
4,750,561	+				-1.5
4,750,561	+				+2.1
4,750,561	+				-0.9
4,750,562	-				-1.3
4,750,562	-				-0.2
4,750,562	-				-0.6
4,750,562	-				-2.5
4,750,590	+				+0.2
4,750,591	-				-1.0
4,750,591	-				-0.7
4,750,596	+				-1.6
4,750,596	+				+0.5
4,750,597	-				+0.1
4,750,730	-				-1.7
4,750,858	-		DDA3937_RS23455	0.89	-1.8
4,750,858	-		DDA3937_RS23455	0.89	-1.6
4,750,858	-		DDA3937_RS23455	0.89	-1.0
4,750,859	+				+0.3
4,750,860	-				-1.3
4,750,860	-				+0.2
4,750,860	-				-0.6
4,750,870	+				-0.2
4,750,872	+				-0.3
4,750,872	+				+0.3
4,750,873	-				-1.2
4,750,873	-				+2.4
4,750,887	-				+0.1
4,750,920	+				-0.2
4,750,920	+				-1.2
4,750,920	+				+0.4
4,750,920	+				-0.5
4,750,920	+				-0.6
4,750,920	+				+1.2
4,750,920	+				+0.2
4,750,921	-				+1.6
4,750,921	-				-0.9
4,750,921	-				+3.0
4,750,921	-				-1.6
4,750,921	-				-0.2
4,750,921	-				-1.5
4,750,921	-				+0.4
4,750,922	+				-1.8
4,750,922	+				+0.2
4,750,922	+				-1.9
4,750,922	+				-1.7
4,750,922	+				-0.3
4,750,922	+				-0.3
4,750,922	+				-1.1
4,750,922	+				-1.9
4,750,922	+				-1.2
4,750,922	+				-0.6
4,750,922	+				+0.4
4,750,923	-				-0.7
4,750,923	-				-1.2
4,750,923	-				-0.5
4,750,923	-				+0.1
4,750,923	-				+0.8
4,750,923	-				-0.6
4,751,080	+		DDA3937_RS20900	0.21	-1.6
4,751,080	+		DDA3937_RS20900	0.21	-0.7
4,751,081	-		DDA3937_RS20900	0.21	-1.9
4,751,081	-		DDA3937_RS20900	0.21	-1.0
4,751,100	+		DDA3937_RS20900	0.23	-0.7
4,751,100	+		DDA3937_RS20900	0.23	-0.1
4,751,101	-		DDA3937_RS20900	0.23	-0.4
4,751,101	-		DDA3937_RS20900	0.23	-1.5
4,751,118	+		DDA3937_RS20900	0.25	-0.8
4,751,118	+		DDA3937_RS20900	0.25	-0.9
4,751,118	+		DDA3937_RS20900	0.25	-0.8
4,751,119	-		DDA3937_RS20900	0.25	-0.5
4,751,119	-		DDA3937_RS20900	0.25	-0.0
4,751,122	+		DDA3937_RS20900	0.25	-0.4
4,751,122	+		DDA3937_RS20900	0.25	-1.4
4,751,122	+		DDA3937_RS20900	0.25	+0.7
4,751,122	+		DDA3937_RS20900	0.25	-0.2
4,751,123	-		DDA3937_RS20900	0.25	-1.6
4,751,123	-		DDA3937_RS20900	0.25	+2.0
4,751,123	-		DDA3937_RS20900	0.25	+1.4
4,751,123	-		DDA3937_RS20900	0.25	+0.2
4,751,123	-		DDA3937_RS20900	0.25	-1.2
4,751,123	-		DDA3937_RS20900	0.25	+0.4
4,751,123	-		DDA3937_RS20900	0.25	-1.1
4,751,123	-		DDA3937_RS20900	0.25	-0.8
4,751,227	+		DDA3937_RS20900	0.36	+1.3
4,751,227	+		DDA3937_RS20900	0.36	-0.4
4,751,227	+		DDA3937_RS20900	0.36	-1.3
4,751,235	+		DDA3937_RS20900	0.37	+0.0
4,751,264	+		DDA3937_RS20900	0.40	-0.7
4,751,323	-		DDA3937_RS20900	0.46	-1.4
4,751,323	-		DDA3937_RS20900	0.46	-1.0
4,751,460	+		DDA3937_RS20900	0.61	-1.0
4,751,460	+		DDA3937_RS20900	0.61	+3.4
4,751,460	+		DDA3937_RS20900	0.61	-0.9
4,751,460	+		DDA3937_RS20900	0.61	-0.8
4,751,461	-		DDA3937_RS20900	0.61	+0.6
4,751,499	+		DDA3937_RS20900	0.65	+0.4
4,751,517	+				+0.4
4,751,518	-		DDA3937_RS20900	0.67	-1.0
4,751,597	+		DDA3937_RS20900	0.75	-2.1
4,751,598	-		DDA3937_RS20900	0.75	-0.2
4,751,598	-		DDA3937_RS20900	0.75	-0.7
4,751,626	+		DDA3937_RS20900	0.78	-0.8
4,751,635	-		DDA3937_RS20900	0.79	+0.4
4,751,647	-		DDA3937_RS20900	0.81	-0.7
4,751,700	+		DDA3937_RS20900	0.86	-0.4
4,751,775	+				+0.3
4,751,775	+				+0.5
4,751,776	-				-0.7
4,751,812	+				+1.4
4,751,829	+				-0.9
4,751,829	+				-0.6
4,751,829	+				+0.7
4,751,829	+				-1.4
4,751,829	+				+0.5
4,751,829	+				-0.0
4,751,829	+				+0.6
4,751,830	-				+0.6
4,751,830	-				-2.1
4,751,830	-				-0.4
4,751,830	-				-0.9
4,751,833	+				-1.1
4,751,833	+				+0.6
4,751,833	+				-0.1