Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS21460

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,884,529	-				-1.2
4,884,529	-				-1.6
4,884,529	-				+0.2
4,884,529	-				+0.6
4,884,529	-				+0.5
4,884,529	-				+0.0
4,884,536	+				+0.4
4,884,561	+				+0.3
4,884,561	+				+0.1
4,884,561	+				+0.1
4,884,562	-				+1.1
4,884,562	-				-1.1
4,884,562	-				-0.4
4,884,562	-				-1.2
4,884,562	-				-0.7
4,884,562	-				-0.1
4,884,637	-		DDA3937_RS21455	0.13	+4.5
4,884,637	-		DDA3937_RS21455	0.13	+0.1
4,884,637	-		DDA3937_RS21455	0.13	-1.0
4,884,637	-		DDA3937_RS21455	0.13	+4.1
4,884,641	-		DDA3937_RS21455	0.13	+1.4
4,884,641	-		DDA3937_RS21455	0.13	-0.8
4,884,641	-		DDA3937_RS21455	0.13	+3.3
4,884,641	-		DDA3937_RS21455	0.13	+0.1
4,884,641	-		DDA3937_RS21455	0.13	+0.2
4,884,641	-		DDA3937_RS21455	0.13	-1.7
4,884,650	-		DDA3937_RS21455	0.14	-0.8
4,884,683	-		DDA3937_RS21455	0.19	-0.2
4,884,683	-		DDA3937_RS21455	0.19	-1.2
4,884,703	+		DDA3937_RS21455	0.21	+0.5
4,884,703	+		DDA3937_RS21455	0.21	-0.4
4,884,703	+		DDA3937_RS21455	0.21	+0.5
4,884,703	+		DDA3937_RS21455	0.21	+1.3
4,884,704	-		DDA3937_RS21455	0.21	+3.1
4,884,704	-		DDA3937_RS21455	0.21	-2.1
4,884,704	-		DDA3937_RS21455	0.21	-1.1
4,884,705	+				+0.4
4,884,705	+		DDA3937_RS21455	0.21	-2.6
4,884,705	+		DDA3937_RS21455	0.21	+0.7
4,884,706	-		DDA3937_RS21455	0.21	-0.3
4,884,706	-		DDA3937_RS21455	0.21	+0.1
4,884,706	-		DDA3937_RS21455	0.21	-0.9
4,884,962	+		DDA3937_RS21455	0.54	+2.2
4,884,962	+		DDA3937_RS21455	0.54	-0.5
4,884,962	+		DDA3937_RS21455	0.54	-0.1
4,884,962	+		DDA3937_RS21455	0.54	+0.3
4,884,983	-		DDA3937_RS21455	0.57	-0.9
4,884,983	-		DDA3937_RS21455	0.57	+0.1
4,884,990	+		DDA3937_RS21455	0.58	+0.8
4,884,991	-		DDA3937_RS21455	0.58	-3.3
4,885,034	+		DDA3937_RS21455	0.64	-1.4
4,885,034	+		DDA3937_RS21455	0.64	-1.1
4,885,035	-		DDA3937_RS21455	0.64	+0.3
4,885,078	+		DDA3937_RS21455	0.69	-0.4
4,885,079	-		DDA3937_RS21455	0.69	-0.2
4,885,135	-		DDA3937_RS21455	0.77	-0.1
4,885,211	-		DDA3937_RS21455	0.86	-0.8
4,885,211	-		DDA3937_RS21455	0.86	+0.9
4,885,257	+				+3.8
4,885,258	-				-0.9
4,885,309	+				-0.1
4,885,310	-				+0.8
4,885,310	-				-0.8
4,885,310	-				-0.6
4,885,310	-				-0.9
4,885,362	-				-1.0
4,885,369	-				-0.7
4,885,371	+				+0.7
4,885,372	-				-0.3
4,885,372	-				+0.8
4,885,382	+				-0.8
4,885,382	+				-0.9
4,885,383	-				-1.6
4,885,383	-				+0.9
4,885,383	-				-0.4
4,885,405	+				-0.3
4,885,420	+				-1.5
4,885,420	+				-0.8
4,885,421	-				-1.4
4,885,428	+				-1.4
4,885,428	+				+0.6
4,885,428	+				+0.1
4,885,428	+				-0.2
4,885,429	-				-0.8
4,885,429	-				-0.2
4,885,465	+				-0.7
4,885,466	-				+0.8
4,885,624	+		DDA3937_RS21460	0.22	-0.3
4,885,624	+		DDA3937_RS21460	0.22	+0.5
4,885,625	-		DDA3937_RS21460	0.22	-0.7
4,885,625	-		DDA3937_RS21460	0.22	-1.5
4,885,827	-		DDA3937_RS21460	0.45	-1.7
4,885,876	+		DDA3937_RS21460	0.51	-0.7
4,885,946	-		DDA3937_RS21460	0.58	-2.7
4,885,976	-		DDA3937_RS21460	0.62	-2.3
4,885,983	+		DDA3937_RS21460	0.63	-0.3
4,885,995	+		DDA3937_RS21460	0.64	-2.0
4,885,995	+		DDA3937_RS21460	0.64	-1.0
4,885,996	-		DDA3937_RS21460	0.64	+0.3
4,886,095	+		DDA3937_RS21460	0.75	-1.1
4,886,096	-		DDA3937_RS21460	0.75	-1.7
4,886,098	+		DDA3937_RS21460	0.76	-1.2
4,886,376	+				-1.9
4,886,376	+				-0.4
4,886,490	+		DDA3937_RS21465	0.18	-0.6
4,886,490	+		DDA3937_RS21465	0.18	+0.6
4,886,490	+		DDA3937_RS21465	0.18	+1.4
4,886,490	+		DDA3937_RS21465	0.18	-0.9
4,886,491	-		DDA3937_RS21465	0.18	+1.8
4,886,491	-		DDA3937_RS21465	0.18	+0.1
4,886,491	-		DDA3937_RS21465	0.18	-0.9
4,886,491	-		DDA3937_RS21465	0.18	-0.6
4,886,491	-		DDA3937_RS21465	0.18	+1.7
4,886,491	-		DDA3937_RS21465	0.18	-0.6
4,886,492	+		DDA3937_RS21465	0.19	-0.4
4,886,492	+		DDA3937_RS21465	0.19	+0.1
4,886,492	+		DDA3937_RS21465	0.19	-0.8
4,886,492	+		DDA3937_RS21465	0.19	-1.1
4,886,492	+		DDA3937_RS21465	0.19	-2.0
4,886,492	+		DDA3937_RS21465	0.19	-0.8
4,886,492	+		DDA3937_RS21465	0.19	-1.3
4,886,492	+		DDA3937_RS21465	0.19	+1.1
4,886,492	+		DDA3937_RS21465	0.19	-2.4
4,886,492	+		DDA3937_RS21465	0.19	+0.9
4,886,493	-		DDA3937_RS21465	0.19	+2.2
4,886,493	-		DDA3937_RS21465	0.19	-0.6
4,886,493	-		DDA3937_RS21465	0.19	-0.1
4,886,493	-		DDA3937_RS21465	0.19	+0.3
4,886,493	-		DDA3937_RS21465	0.19	+0.8
4,886,493	-		DDA3937_RS21465	0.19	+0.3
4,886,516	+		DDA3937_RS21465	0.21	-0.8
4,886,516	+		DDA3937_RS21465	0.21	+0.1
4,886,517	-		DDA3937_RS21465	0.21	-1.4
4,886,576	-		DDA3937_RS21465	0.27	-0.4
4,886,622	+		DDA3937_RS21465	0.32	-1.0
4,886,623	-				+1.4
4,886,623	-		DDA3937_RS21465	0.32	+0.2
4,886,623	-		DDA3937_RS21465	0.32	-0.4
4,886,631	+		DDA3937_RS21465	0.33	+0.1
4,886,632	-		DDA3937_RS21465	0.33	-1.3
4,886,632	-		DDA3937_RS21465	0.33	-0.2
4,886,723	+		DDA3937_RS21465	0.43	-1.9
4,886,723	+		DDA3937_RS21465	0.43	+0.1
4,886,723	+		DDA3937_RS21465	0.43	-1.4
4,886,723	+		DDA3937_RS21465	0.43	-1.9
4,886,724	-		DDA3937_RS21465	0.43	-0.4
4,886,724	-		DDA3937_RS21465	0.43	+0.2
4,886,724	-		DDA3937_RS21465	0.43	-0.9
4,886,724	-		DDA3937_RS21465	0.43	-0.5
4,886,766	+		DDA3937_RS21465	0.47	+1.4
4,886,849	+		DDA3937_RS21465	0.56	-2.6
4,887,048	-		DDA3937_RS21465	0.76	-0.6
4,887,204	+				-1.0
4,887,250	-				-0.9
4,887,250	-				-0.9
4,887,273	+				+0.6
4,887,273	+				-1.3
4,887,274	-				-0.9
4,887,274	-				-0.6
4,887,274	-				-0.8
4,887,274	-				+0.5
4,887,274	-				-1.9
4,887,293	+				-0.1
4,887,310	+				+1.6