Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19490

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,431,068	+				-1.3
4,431,118	+		DDA3937_RS19485	0.12	-1.0
4,431,126	-		DDA3937_RS19485	0.13	+0.1
4,431,142	+		DDA3937_RS19485	0.15	+0.4
4,431,187	-		DDA3937_RS19485	0.19	-0.7
4,431,187	-		DDA3937_RS19485	0.19	-0.9
4,431,187	-		DDA3937_RS19485	0.19	-1.1
4,431,187	-		DDA3937_RS19485	0.19	+0.0
4,431,206	-		DDA3937_RS19485	0.21	-2.5
4,431,206	-		DDA3937_RS19485	0.21	-0.2
4,431,206	-		DDA3937_RS19485	0.21	-0.3
4,431,206	-		DDA3937_RS19485	0.21	-0.3
4,431,225	+		DDA3937_RS19485	0.23	-0.6
4,431,225	+		DDA3937_RS19485	0.23	-0.5
4,431,225	+		DDA3937_RS19485	0.23	-0.5
4,431,349	-		DDA3937_RS19485	0.35	+0.7
4,431,349	-		DDA3937_RS19485	0.35	-0.4
4,431,349	-		DDA3937_RS19485	0.35	+0.3
4,431,349	-		DDA3937_RS19485	0.35	-0.3
4,431,351	+		DDA3937_RS19485	0.35	+0.1
4,431,352	-		DDA3937_RS19485	0.35	+0.1
4,431,352	-				+1.3
4,431,385	+		DDA3937_RS19485	0.38	-0.3
4,431,386	-		DDA3937_RS19485	0.38	-0.4
4,431,505	+		DDA3937_RS19485	0.50	+0.3
4,431,506	-		DDA3937_RS19485	0.50	+5.1
4,431,506	-		DDA3937_RS19485	0.50	-1.1
4,431,506	-		DDA3937_RS19485	0.50	-1.6
4,431,506	-		DDA3937_RS19485	0.50	-1.0
4,431,506	-		DDA3937_RS19485	0.50	-0.5
4,431,516	+		DDA3937_RS19485	0.51	+0.9
4,431,516	+		DDA3937_RS19485	0.51	+0.7
4,431,516	+		DDA3937_RS19485	0.51	-0.9
4,431,517	-		DDA3937_RS19485	0.51	+0.5
4,431,524	+		DDA3937_RS19485	0.52	+0.0
4,431,524	+		DDA3937_RS19485	0.52	+1.6
4,431,524	+		DDA3937_RS19485	0.52	-1.0
4,431,524	+		DDA3937_RS19485	0.52	-1.5
4,431,524	+		DDA3937_RS19485	0.52	-0.2
4,431,524	+		DDA3937_RS19485	0.52	-1.3
4,431,525	-		DDA3937_RS19485	0.52	+1.3
4,431,525	-		DDA3937_RS19485	0.52	-0.5
4,431,525	-		DDA3937_RS19485	0.52	-1.0
4,431,525	-		DDA3937_RS19485	0.52	+0.7
4,431,525	-		DDA3937_RS19485	0.52	+0.5
4,431,554	-		DDA3937_RS19485	0.55	-0.3
4,431,555	+		DDA3937_RS19485	0.55	+0.7
4,431,556	-		DDA3937_RS19485	0.55	-1.3
4,431,556	-		DDA3937_RS19485	0.55	+1.6
4,431,556	-		DDA3937_RS19485	0.55	-1.2
4,431,556	-		DDA3937_RS19485	0.55	+0.3
4,431,654	+		DDA3937_RS19485	0.64	+0.2
4,431,654	+		DDA3937_RS19485	0.64	+1.4
4,431,654	+		DDA3937_RS19485	0.64	-0.9
4,431,654	+		DDA3937_RS19485	0.64	+1.3
4,431,655	-		DDA3937_RS19485	0.64	+1.7
4,431,655	-		DDA3937_RS19485	0.64	-1.1
4,431,846	+		DDA3937_RS19485	0.83	+3.8
4,431,846	+		DDA3937_RS19485	0.83	-0.3
4,431,846	+		DDA3937_RS19485	0.83	+0.2
4,431,846	+		DDA3937_RS19485	0.83	-0.8
4,431,846	+		DDA3937_RS19485	0.83	-1.1
4,431,847	-		DDA3937_RS19485	0.83	+1.3
4,431,847	-		DDA3937_RS19485	0.83	+0.4
4,431,847	-		DDA3937_RS19485	0.83	-1.1
4,431,861	+		DDA3937_RS19485	0.84	-0.3
4,431,861	+		DDA3937_RS19485	0.84	-0.5
4,431,862	-		DDA3937_RS19485	0.84	+1.6
4,431,896	-		DDA3937_RS19485	0.88	-1.6
4,431,902	-		DDA3937_RS19485	0.88	-0.8
4,432,113	+				+0.0
4,432,113	+				+0.7
4,432,315	-		DDA3937_RS19490	0.21	-0.7
4,432,441	+		DDA3937_RS19490	0.30	-0.4
4,432,441	+		DDA3937_RS19490	0.30	+0.0
4,432,441	+		DDA3937_RS19490	0.30	-1.0
4,432,441	+		DDA3937_RS19490	0.30	-0.4
4,432,441	+		DDA3937_RS19490	0.30	-0.2
4,432,442	-		DDA3937_RS19490	0.31	-1.6
4,432,442	-		DDA3937_RS19490	0.31	-1.5
4,432,442	-		DDA3937_RS19490	0.31	-0.8
4,432,442	-		DDA3937_RS19490	0.31	-0.4
4,432,442	-		DDA3937_RS19490	0.31	+1.3
4,432,525	+		DDA3937_RS19490	0.37	-0.8
4,432,525	+		DDA3937_RS19490	0.37	+0.1
4,432,526	-		DDA3937_RS19490	0.37	+2.6
4,432,612	+		DDA3937_RS19490	0.43	-0.2
4,432,613	-		DDA3937_RS19490	0.43	-2.4
4,432,648	+		DDA3937_RS19490	0.46	+0.8
4,432,649	-		DDA3937_RS19490	0.46	-0.8
4,432,649	-		DDA3937_RS19490	0.46	-0.7
4,432,667	+		DDA3937_RS19490	0.47	+0.1
4,432,948	+		DDA3937_RS19490	0.67	-0.7
4,432,967	-		DDA3937_RS19490	0.69	-2.4
4,432,967	-		DDA3937_RS19490	0.69	+0.0
4,432,967	-		DDA3937_RS19490	0.69	-0.4
4,433,105	-		DDA3937_RS19490	0.79	-1.3
4,433,105	-		DDA3937_RS19490	0.79	+1.1
4,433,105	-		DDA3937_RS19490	0.79	-0.8
4,433,134	+		DDA3937_RS19490	0.81	-0.5
4,433,135	-		DDA3937_RS19490	0.81	-1.7
4,433,138	-		DDA3937_RS19490	0.81	-1.3
4,433,138	-		DDA3937_RS19490	0.81	-0.3
4,433,352	+				-1.2
4,433,394	-				-0.1
4,433,394	-				-1.8
4,433,432	+				-0.7
4,433,476	+				-0.3
4,433,720	+				+0.4
4,433,720	+				+0.3
4,433,721	-				-0.6
4,433,744	+				-1.5
4,433,744	+				+1.0
4,433,744	+				+0.5
4,433,744	+				-1.0
4,433,745	-				-0.0
4,433,752	+				-0.7
4,433,802	+				-0.5
4,433,803	-				+1.3
4,433,803	-				-1.6
4,433,820	+				-1.1
4,433,820	+				-0.5
4,433,820	+				-0.5
4,433,820	+				+1.5
4,433,820	+				-0.0
4,433,820	+				-1.5
4,433,820	+				+3.0
4,433,820	+				+0.3
4,433,820	+				-1.1
4,433,820	+				-1.4
4,433,820	+				-0.2
4,433,821	-				-1.2
4,433,821	-				+2.3
4,433,821	-				+0.3
4,433,821	-				-1.2
4,433,821	-				+0.0
4,433,821	-				-1.1
4,433,821	-				-1.0
4,433,824	+				+0.4
4,433,825	-				+0.0
4,433,825	-				-0.5
4,433,851	+				+0.3
4,433,851	+				-2.7
4,433,852	-				+0.0
4,433,867	-				+0.3
4,433,876	-				-2.1
4,433,889	+				-0.8
4,433,890	-				-0.8
4,434,083	+		DDA3937_RS19495	0.20	-0.5
4,434,083	+		DDA3937_RS19495	0.20	+1.8
4,434,083	+		DDA3937_RS19495	0.20	-0.7
4,434,083	+		DDA3937_RS19495	0.20	-0.4
4,434,083	+		DDA3937_RS19495	0.20	-0.5
4,434,084	-		DDA3937_RS19495	0.21	+1.0
4,434,084	-		DDA3937_RS19495	0.21	+0.0
4,434,084	-		DDA3937_RS19495	0.21	+0.9
4,434,084	-		DDA3937_RS19495	0.21	-0.8
4,434,084	-		DDA3937_RS19495	0.21	+0.5
4,434,085	+		DDA3937_RS19495	0.21	-0.5
4,434,085	+		DDA3937_RS19495	0.21	+0.8
4,434,127	+		DDA3937_RS19495	0.24	-0.2
4,434,238	+		DDA3937_RS19495	0.34	-0.5