Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS18070 and DDA3937_RS18075 are separated by 22 nucleotides DDA3937_RS18075 and DDA3937_RS18080 overlap by 4 nucleotides DDA3937_RS18080 and DDA3937_RS18085 are separated by 2 nucleotides
DDA3937_RS18070: DDA3937_RS18070 - peptidoglycan glycosyltransferase FtsI, at 4,124,460 to 4,126,223
_RS18070
DDA3937_RS18075: DDA3937_RS18075 - cell division protein FtsL, at 4,126,246 to 4,126,569
_RS18075
DDA3937_RS18080: DDA3937_RS18080 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 4,126,566 to 4,127,507
_RS18080
DDA3937_RS18085: DDA3937_RS18085 - division/cell wall cluster transcriptional repressor MraZ, at 4,127,510 to 4,127,968
_RS18085
Position (kb)
4126
4127
4128 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4126.267 kb on - strand at 4126.791 kb on - strand, within DDA3937_RS18080 at 4126.791 kb on - strand, within DDA3937_RS18080 at 4126.877 kb on - strand, within DDA3937_RS18080 at 4126.877 kb on - strand at 4126.881 kb on - strand at 4127.127 kb on - strand, within DDA3937_RS18080 at 4127.313 kb on - strand, within DDA3937_RS18080 at 4127.512 kb on - strand at 4127.512 kb on - strand at 4127.512 kb on - strand at 4127.512 kb on - strand at 4127.512 kb on - strand at 4127.514 kb on - strand at 4127.514 kb on - strand at 4127.514 kb on - strand at 4127.514 kb on - strand at 4127.520 kb on - strand at 4127.520 kb on - strand at 4127.520 kb on - strand at 4127.520 kb on - strand at 4127.520 kb on - strand at 4127.541 kb on - strand at 4127.657 kb on - strand, within DDA3937_RS18085 at 4127.681 kb on - strand, within DDA3937_RS18085 at 4127.681 kb on - strand, within DDA3937_RS18085 at 4127.681 kb on - strand, within DDA3937_RS18085 at 4127.774 kb on - strand, within DDA3937_RS18085 at 4127.827 kb on - strand, within DDA3937_RS18085 at 4127.827 kb on - strand, within DDA3937_RS18085 at 4127.827 kb on - strand, within DDA3937_RS18085 at 4127.975 kb on - strand at 4127.975 kb on - strand at 4127.975 kb on - strand at 4127.975 kb on - strand at 4128.085 kb on + strand at 4128.162 kb on + strand at 4128.204 kb on + strand at 4128.205 kb on - strand at 4128.228 kb on + strand at 4128.229 kb on - strand at 4128.231 kb on + strand at 4128.231 kb on + strand at 4128.274 kb on + strand at 4128.414 kb on - strand at 4128.428 kb on + strand at 4128.429 kb on - strand at 4128.433 kb on - strand at 4128.433 kb on - strand at 4128.433 kb on - strand at 4128.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 4,126,267 - +2.0 4,126,791 - DDA3937_RS18080 0.24 -1.6 4,126,791 - DDA3937_RS18080 0.24 -0.1 4,126,877 - DDA3937_RS18080 0.33 -1.1 4,126,877 - +1.7 4,126,881 - +0.7 4,127,127 - DDA3937_RS18080 0.60 +0.5 4,127,313 - DDA3937_RS18080 0.79 -1.4 4,127,512 - -0.9 4,127,512 - -0.9 4,127,512 - +1.2 4,127,512 - -1.5 4,127,512 - -0.2 4,127,514 - -1.2 4,127,514 - +0.1 4,127,514 - -0.3 4,127,514 - -0.4 4,127,520 - -0.2 4,127,520 - -2.4 4,127,520 - -1.6 4,127,520 - +1.2 4,127,520 - -1.5 4,127,541 - -0.6 4,127,657 - DDA3937_RS18085 0.32 +0.1 4,127,681 - DDA3937_RS18085 0.37 -1.8 4,127,681 - DDA3937_RS18085 0.37 -0.8 4,127,681 - DDA3937_RS18085 0.37 -0.5 4,127,774 - DDA3937_RS18085 0.58 +0.2 4,127,827 - DDA3937_RS18085 0.69 -1.1 4,127,827 - DDA3937_RS18085 0.69 -3.0 4,127,827 - DDA3937_RS18085 0.69 -0.1 4,127,975 - -0.7 4,127,975 - +0.2 4,127,975 - -0.1 4,127,975 - -1.8 4,128,085 + -1.1 4,128,162 + +1.4 4,128,204 + +0.4 4,128,205 - +1.5 4,128,228 + +1.2 4,128,229 - +0.0 4,128,231 + -1.1 4,128,231 + -1.8 4,128,274 + +0.8 4,128,414 - +0.1 4,128,428 + +0.2 4,128,429 - -1.2 4,128,433 - -0.4 4,128,433 - -2.2 4,128,433 - +0.5 4,128,479 - -0.7
Or see this region's nucleotide sequence