Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17940

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,095,750	+		DDA3937_RS17935	0.55	+2.0
4,095,750	+		DDA3937_RS17935	0.55	-1.0
4,095,750	+		DDA3937_RS17935	0.55	+2.0
4,095,750	+		DDA3937_RS17935	0.55	+0.6
4,095,750	+		DDA3937_RS17935	0.55	+0.1
4,095,750	+		DDA3937_RS17935	0.55	+1.2
4,095,750	+		DDA3937_RS17935	0.55	+0.1
4,095,751	-		DDA3937_RS17935	0.55	+2.0
4,095,751	-		DDA3937_RS17935	0.55	-0.4
4,095,783	+		DDA3937_RS17935	0.57	+0.4
4,095,812	+		DDA3937_RS17935	0.59	-0.2
4,095,863	+		DDA3937_RS17935	0.63	-0.2
4,095,880	+		DDA3937_RS17935	0.64	-0.9
4,095,903	+		DDA3937_RS17935	0.66	-0.9
4,095,903	+		DDA3937_RS17935	0.66	+0.1
4,095,904	-		DDA3937_RS17935	0.66	-0.6
4,095,904	-		DDA3937_RS17935	0.66	+0.5
4,095,904	-		DDA3937_RS17935	0.66	+0.0
4,095,904	-		DDA3937_RS17935	0.66	+0.5
4,095,904	-		DDA3937_RS17935	0.66	+0.7
4,095,919	-		DDA3937_RS17935	0.67	-1.1
4,095,939	+		DDA3937_RS17935	0.69	+0.6
4,095,939	+		DDA3937_RS17935	0.69	-1.2
4,095,985	+		DDA3937_RS17935	0.72	+3.0
4,095,986	-		DDA3937_RS17935	0.72	+0.9
4,096,059	+		DDA3937_RS17935	0.78	-0.2
4,096,059	+		DDA3937_RS17935	0.78	-0.9
4,096,059	+		DDA3937_RS17935	0.78	-1.0
4,096,059	+		DDA3937_RS17935	0.78	-1.6
4,096,059	+		DDA3937_RS17935	0.78	+0.9
4,096,059	+		DDA3937_RS17935	0.78	+2.8
4,096,059	+		DDA3937_RS17935	0.78	-0.8
4,096,059	+		DDA3937_RS17935	0.78	+0.9
4,096,059	+		DDA3937_RS17935	0.78	+1.0
4,096,059	+		DDA3937_RS17935	0.78	+1.4
4,096,059	+		DDA3937_RS17935	0.78	-0.5
4,096,059	+		DDA3937_RS17935	0.78	+0.3
4,096,059	+		DDA3937_RS17935	0.78	-1.1
4,096,059	+		DDA3937_RS17935	0.78	+0.4
4,096,060	-		DDA3937_RS17935	0.78	+2.9
4,096,060	-		DDA3937_RS17935	0.78	+1.1
4,096,060	-		DDA3937_RS17935	0.78	+1.1
4,096,060	-		DDA3937_RS17935	0.78	-0.1
4,096,060	-		DDA3937_RS17935	0.78	+1.5
4,096,060	-		DDA3937_RS17935	0.78	-0.3
4,096,063	+		DDA3937_RS17935	0.78	-0.4
4,096,063	+				+3.6
4,096,063	+		DDA3937_RS17935	0.78	-0.1
4,096,063	+		DDA3937_RS17935	0.78	-0.5
4,096,063	+		DDA3937_RS17935	0.78	+1.3
4,096,064	-		DDA3937_RS17935	0.78	+0.6
4,096,064	-		DDA3937_RS17935	0.78	+2.2
4,096,064	-		DDA3937_RS17935	0.78	-0.1
4,096,166	+		DDA3937_RS17935	0.86	-0.3
4,096,224	+				-0.6
4,096,224	+				+1.3
4,096,224	+				-0.8
4,096,225	-				-0.8
4,096,225	-				+1.0
4,096,225	-				-1.2
4,096,241	+				-0.4
4,096,242	-				-0.4
4,096,242	-				-0.3
4,096,266	+				-3.2
4,096,266	+				+2.0
4,096,266	+				+0.2
4,096,266	+				+1.0
4,096,266	+				-0.5
4,096,266	+				+1.8
4,096,266	+				+0.4
4,096,266	+				-0.1
4,096,266	+				-0.9
4,096,266	+				-0.8
4,096,267	-				-0.1
4,096,267	-				+0.4
4,096,267	-				-0.2
4,096,267	-				+5.7
4,096,297	+				+0.7
4,096,372	+				+0.1
4,096,372	+				-1.2
4,096,373	-				+0.5
4,096,373	-				+1.7
4,096,436	+				+2.2
4,096,437	-				-0.6
4,096,437	-				-0.6
4,096,439	-				+1.4
4,096,447	-				-0.1
4,096,451	+				-0.6
4,096,452	-				-2.0
4,096,452	-				+0.8
4,096,452	-				-0.1
4,096,452	-				-1.3
4,096,455	+				-0.9
4,096,456	-				+1.8
4,096,456	-				+0.3
4,096,493	-				-0.1
4,096,543	-		DDA3937_RS17940	0.13	+0.2
4,096,543	-		DDA3937_RS17940	0.13	+2.6
4,096,586	-		DDA3937_RS17940	0.18	-0.1
4,096,668	-		DDA3937_RS17940	0.27	+1.2
4,096,668	-		DDA3937_RS17940	0.27	-1.6
4,096,668	-		DDA3937_RS17940	0.27	-0.9
4,096,714	+		DDA3937_RS17940	0.33	-0.8
4,096,715	-		DDA3937_RS17940	0.33	+1.1
4,096,719	+		DDA3937_RS17940	0.33	-0.8
4,096,719	+		DDA3937_RS17940	0.33	-0.9
4,096,719	+		DDA3937_RS17940	0.33	-0.9
4,096,859	+		DDA3937_RS17940	0.50	+0.5
4,096,904	-		DDA3937_RS17940	0.55	-0.2
4,097,007	+		DDA3937_RS17940	0.67	+0.8
4,097,007	+		DDA3937_RS17940	0.67	-0.1
4,097,008	-		DDA3937_RS17940	0.67	+1.1
4,097,008	-		DDA3937_RS17940	0.67	+0.3
4,097,009	+		DDA3937_RS17940	0.67	-1.4
4,097,009	+		DDA3937_RS17940	0.67	-0.9
4,097,009	+		DDA3937_RS17940	0.67	-0.1
4,097,010	-		DDA3937_RS17940	0.67	-2.1
4,097,010	-		DDA3937_RS17940	0.67	-1.5
4,097,010	-		DDA3937_RS17940	0.67	+1.1
4,097,010	-		DDA3937_RS17940	0.67	-0.7
4,097,010	-		DDA3937_RS17940	0.67	-1.8
4,097,010	-		DDA3937_RS17940	0.67	-2.5
4,097,018	+		DDA3937_RS17940	0.68	+1.7
4,097,018	+		DDA3937_RS17940	0.68	-1.8
4,097,019	-		DDA3937_RS17940	0.68	+0.5
4,097,019	-		DDA3937_RS17940	0.68	-1.7
4,097,071	+		DDA3937_RS17940	0.74	-2.8
4,097,072	-		DDA3937_RS17940	0.75	+1.7
4,097,074	+		DDA3937_RS17940	0.75	-0.4
4,097,074	+		DDA3937_RS17940	0.75	+0.4
4,097,075	-		DDA3937_RS17940	0.75	-1.3
4,097,075	-				+1.2
4,097,075	-		DDA3937_RS17940	0.75	-0.6
4,097,242	-				+5.4
4,097,272	+				+1.5
4,097,277	+				-1.2
4,097,278	-				+0.4
4,097,394	+		DDA3937_RS17945	0.17	-1.1
4,097,406	+		DDA3937_RS17945	0.20	+2.5
4,097,406	+		DDA3937_RS17945	0.20	-0.2
4,097,418	+		DDA3937_RS17945	0.22	-2.7
4,097,418	+				+1.2
4,097,426	+		DDA3937_RS17945	0.23	-0.9
4,097,426	+		DDA3937_RS17945	0.23	+0.0
4,097,426	+		DDA3937_RS17945	0.23	-0.5
4,097,426	+		DDA3937_RS17945	0.23	+0.7
4,097,426	+		DDA3937_RS17945	0.23	-0.8
4,097,468	+		DDA3937_RS17945	0.31	-1.3
4,097,469	-		DDA3937_RS17945	0.31	-0.5
4,097,493	+		DDA3937_RS17945	0.35	-0.8
4,097,597	+		DDA3937_RS17945	0.54	+0.2
4,097,597	+		DDA3937_RS17945	0.54	-0.1
4,097,597	+		DDA3937_RS17945	0.54	-3.2
4,097,597	+		DDA3937_RS17945	0.54	-2.1
4,097,597	+				+0.2
4,097,597	+		DDA3937_RS17945	0.54	-0.1
4,097,597	+		DDA3937_RS17945	0.54	+0.8
4,097,598	-		DDA3937_RS17945	0.54	-1.8
4,097,598	-		DDA3937_RS17945	0.54	-1.7
4,097,598	-				+0.2
4,097,656	+		DDA3937_RS17945	0.64	+0.1
4,097,657	-		DDA3937_RS17945	0.64	-2.1
4,097,669	+		DDA3937_RS17945	0.66	-0.8
4,097,669	+		DDA3937_RS17945	0.66	-0.7
4,097,669	+		DDA3937_RS17945	0.66	+2.3
4,097,670	-		DDA3937_RS17945	0.67	-0.6
4,097,715	+		DDA3937_RS17945	0.75	-0.5
4,097,715	+		DDA3937_RS17945	0.75	-2.7
4,097,715	+		DDA3937_RS17945	0.75	-1.0
4,097,716	-		DDA3937_RS17945	0.75	-0.6
4,097,717	+		DDA3937_RS17945	0.75	+1.8
4,097,717	+		DDA3937_RS17945	0.75	-0.1
4,097,717	+		DDA3937_RS17945	0.75	-0.2
4,097,718	-		DDA3937_RS17945	0.75	-0.9
4,097,718	-		DDA3937_RS17945	0.75	+0.7
4,097,718	-		DDA3937_RS17945	0.75	+0.4
4,097,718	-		DDA3937_RS17945	0.75	-0.5
4,097,718	-		DDA3937_RS17945	0.75	+0.7
4,097,916	+				-0.3
4,097,916	+				-0.1
4,097,916	+				+0.3
4,097,917	-				-2.0
4,097,917	-				+1.2
4,097,917	-				-0.9
4,097,918	+				-1.1
4,097,919	-				-0.9
4,097,919	-				-0.3
4,097,988	+				-2.0
4,098,095	+				-1.5
4,098,096	-				+0.7
4,098,192	+				+0.1
4,098,192	+				+1.6
4,098,192	+				+0.6
4,098,192	+				-0.1
4,098,193	-				+0.6
4,098,193	-				-0.9
4,098,193	-				-1.6
4,098,201	+				-0.8
4,098,201	+				+0.5
4,098,202	-				+1.2
4,098,202	-				-2.5
4,098,205	-				+0.1