Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16130

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,682,678	-				-0.3
3,682,680	+				-0.0
3,682,680	+				+0.0
3,682,680	+				-0.8
3,682,681	-				+2.0
3,682,681	-				-0.2
3,682,683	+				-1.4
3,682,740	+				+0.4
3,682,740	+				+0.0
3,682,740	+				+1.6
3,682,741	-				+0.6
3,682,741	-				+2.6
3,682,741	-				+1.7
3,682,741	-				-0.4
3,682,741	-				+0.0
3,682,762	-				+5.0
3,682,782	-				-0.5
3,682,782	-				+0.7
3,682,790	+				-0.9
3,682,790	+				-0.0
3,682,790	+				-0.6
3,682,794	+				+0.4
3,682,795	-				+0.4
3,682,795	-				-1.3
3,682,865	+				-1.2
3,682,866	-				-1.1
3,682,866	-				+1.3
3,682,926	-				-0.9
3,682,926	-				-0.8
3,682,963	-				+2.3
3,682,963	-				+2.6
3,682,963	-				-1.5
3,682,971	-				+0.1
3,682,976	+				+1.1
3,682,976	+				-1.0
3,682,976	+				+0.2
3,682,976	+				-0.9
3,682,977	-				-1.0
3,682,985	+				+0.8
3,682,986	-				-0.8
3,683,003	+				-3.0
3,683,004	-				+0.4
3,683,017	+		DDA3937_RS16120	0.14	-1.3
3,683,018	-		DDA3937_RS16120	0.14	+0.7
3,683,054	+		DDA3937_RS16120	0.25	-1.6
3,683,087	+		DDA3937_RS16120	0.35	-0.2
3,683,088	-		DDA3937_RS16120	0.35	-1.7
3,683,088	-		DDA3937_RS16120	0.35	-0.0
3,683,135	+		DDA3937_RS16120	0.49	-0.2
3,683,136	-		DDA3937_RS16120	0.49	+0.6
3,683,136	-		DDA3937_RS16120	0.49	+1.9
3,683,177	+		DDA3937_RS16120	0.61	-0.4
3,683,177	+		DDA3937_RS16120	0.61	+0.8
3,683,177	+		DDA3937_RS16120	0.61	+2.0
3,683,177	+		DDA3937_RS16120	0.61	+1.1
3,683,177	+		DDA3937_RS16120	0.61	+0.7
3,683,177	+		DDA3937_RS16120	0.61	+0.4
3,683,177	+		DDA3937_RS16120	0.61	-0.6
3,683,177	+		DDA3937_RS16120	0.61	-0.6
3,683,178	-		DDA3937_RS16120	0.62	-0.7
3,683,178	-		DDA3937_RS16120	0.62	-0.5
3,683,178	-		DDA3937_RS16120	0.62	-0.1
3,683,178	-		DDA3937_RS16120	0.62	-0.4
3,683,178	-		DDA3937_RS16120	0.62	-0.4
3,683,178	-		DDA3937_RS16120	0.62	-1.2
3,683,178	-		DDA3937_RS16120	0.62	-1.4
3,683,178	-		DDA3937_RS16120	0.62	+1.1
3,683,178	-		DDA3937_RS16120	0.62	+0.6
3,683,181	+		DDA3937_RS16120	0.62	-1.2
3,683,181	+		DDA3937_RS16120	0.62	-1.0
3,683,181	+		DDA3937_RS16120	0.62	-0.5
3,683,181	+		DDA3937_RS16120	0.62	-1.4
3,683,181	+		DDA3937_RS16120	0.62	-1.4
3,683,181	+		DDA3937_RS16120	0.62	-1.1
3,683,181	+		DDA3937_RS16120	0.62	-1.5
3,683,181	+		DDA3937_RS16120	0.62	-0.6
3,683,181	+				-0.6
3,683,181	+		DDA3937_RS16120	0.62	-1.1
3,683,181	+		DDA3937_RS16120	0.62	+0.6
3,683,181	+		DDA3937_RS16120	0.62	+0.4
3,683,181	+		DDA3937_RS16120	0.62	-0.5
3,683,181	+		DDA3937_RS16120	0.62	-0.1
3,683,182	-		DDA3937_RS16120	0.63	-0.8
3,683,182	-		DDA3937_RS16120	0.63	+0.8
3,683,182	-		DDA3937_RS16120	0.63	+0.0
3,683,182	-		DDA3937_RS16120	0.63	-1.9
3,683,182	-		DDA3937_RS16120	0.63	+0.2
3,683,182	-		DDA3937_RS16120	0.63	-0.0
3,683,182	-		DDA3937_RS16120	0.63	+1.2
3,683,182	-		DDA3937_RS16120	0.63	+0.4
3,683,182	-		DDA3937_RS16120	0.63	+0.2
3,683,182	-		DDA3937_RS16120	0.63	-1.3
3,683,182	-		DDA3937_RS16120	0.63	-1.3
3,683,182	-		DDA3937_RS16120	0.63	+1.4
3,683,184	-		DDA3937_RS16120	0.63	+0.2
3,683,204	+		DDA3937_RS16120	0.69	-0.8
3,683,342	+				+1.0
3,683,418	+				-0.9
3,683,418	+				-0.7
3,683,457	-				+3.7
3,683,468	+				-0.9
3,683,483	-				-0.4
3,683,553	+				+1.4
3,683,590	+				-1.3
3,683,591	-				-1.8
3,683,591	-				-2.0
3,683,596	+				-0.2
3,683,659	-				-1.7
3,683,659	-				-1.7
3,683,659	-				-2.3
3,683,659	-				-2.4
3,683,674	+				+0.0
3,683,682	+				-1.3
3,683,716	+				-1.6
3,683,766	+				-0.8
3,683,826	+		DDA3937_RS16130	0.14	-1.1
3,683,827	-				+2.0
3,683,827	-		DDA3937_RS16130	0.14	-0.3
3,683,852	-		DDA3937_RS16130	0.16	-1.2
3,683,852	-		DDA3937_RS16130	0.16	-1.3
3,683,876	+		DDA3937_RS16130	0.18	+0.2
3,683,876	+		DDA3937_RS16130	0.18	-0.3
3,683,876	+		DDA3937_RS16130	0.18	-0.8
3,683,876	+		DDA3937_RS16130	0.18	-1.0
3,683,876	+		DDA3937_RS16130	0.18	-2.8
3,683,877	-		DDA3937_RS16130	0.18	-0.8
3,683,877	-		DDA3937_RS16130	0.18	-1.8
3,683,877	-		DDA3937_RS16130	0.18	-0.4
3,683,877	-		DDA3937_RS16130	0.18	+2.0
3,683,877	-		DDA3937_RS16130	0.18	+0.3
3,683,877	-		DDA3937_RS16130	0.18	-1.9
3,683,877	-		DDA3937_RS16130	0.18	-0.8
3,683,881	+		DDA3937_RS16130	0.19	-1.0
3,684,005	+		DDA3937_RS16130	0.29	-2.4
3,684,006	-		DDA3937_RS16130	0.29	-0.6
3,684,006	-		DDA3937_RS16130	0.29	-0.9
3,684,006	-		DDA3937_RS16130	0.29	-2.1
3,684,006	-		DDA3937_RS16130	0.29	-3.1
3,684,006	-		DDA3937_RS16130	0.29	-1.6
3,684,006	-		DDA3937_RS16130	0.29	-1.7
3,684,055	+		DDA3937_RS16130	0.34	-0.3
3,684,056	-		DDA3937_RS16130	0.34	-0.8
3,684,056	-		DDA3937_RS16130	0.34	-1.9
3,684,170	+		DDA3937_RS16130	0.44	+0.6
3,684,171	-		DDA3937_RS16130	0.44	-0.3
3,684,224	-		DDA3937_RS16130	0.48	-0.8
3,684,350	+		DDA3937_RS16130	0.59	-2.3
3,684,507	+		DDA3937_RS16130	0.73	-1.4
3,684,562	-		DDA3937_RS16130	0.77	-0.2
3,684,562	-		DDA3937_RS16130	0.77	-0.3
3,684,562	-		DDA3937_RS16130	0.77	-1.0
3,684,631	-		DDA3937_RS16130	0.83	+2.0
3,684,631	-		DDA3937_RS16130	0.83	+0.7
3,684,631	-		DDA3937_RS16130	0.83	-1.0
3,684,631	-		DDA3937_RS16130	0.83	-2.4
3,684,631	-		DDA3937_RS16130	0.83	-0.0
3,684,689	+		DDA3937_RS16130	0.88	-2.4
3,684,689	+		DDA3937_RS16130	0.88	-0.9
3,684,689	+		DDA3937_RS16130	0.88	-0.7
3,684,690	-		DDA3937_RS16130	0.88	-1.8
3,684,690	-		DDA3937_RS16130	0.88	-0.6
3,684,690	-		DDA3937_RS16130	0.88	+1.3
3,684,690	-		DDA3937_RS16130	0.88	-2.4
3,684,691	+		DDA3937_RS16130	0.89	-2.3
3,684,691	+		DDA3937_RS16130	0.89	-1.5
3,684,691	+		DDA3937_RS16130	0.89	-0.7
3,684,730	+				-1.3
3,684,738	+				-1.1
3,684,853	+				-1.1
3,684,853	+				+0.3
3,684,853	+				-0.3
3,684,853	+				+2.3
3,684,854	-				-0.8
3,684,854	-				-0.7
3,684,854	-				+1.0
3,684,854	-				-2.5
3,685,269	-		DDA3937_RS16135	0.30	+0.2