Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15835

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,619,909	+				+0.4
3,619,909	+				+0.2
3,619,923	+				-0.1
3,619,923	+				+0.0
3,619,923	+				-1.3
3,619,923	+				-0.6
3,620,093	+				+0.4
3,620,128	+				-0.2
3,620,128	+				+1.0
3,620,151	+				+0.0
3,620,183	+				+0.4
3,620,190	+				-1.6
3,620,190	+				+0.0
3,620,190	+				-0.4
3,620,191	-				+0.0
3,620,191	-				-2.0
3,620,191	-				-1.2
3,620,191	-				-0.5
3,620,191	-				-0.8
3,620,245	+				+0.5
3,620,245	+				-1.3
3,620,246	-				+4.7
3,620,253	+				-0.0
3,620,254	-				+0.0
3,620,254	-				-0.2
3,620,263	+				+2.0
3,620,263	+				+0.0
3,620,264	-				+1.0
3,620,317	+				+0.7
3,620,368	+				-0.6
3,620,380	-				-0.6
3,620,386	+				-1.8
3,620,386	+				-0.5
3,620,386	+				+0.1
3,620,393	-				+2.1
3,620,393	-				-0.6
3,620,393	-				+0.4
3,620,394	+				+1.7
3,620,394	+				-0.2
3,620,394	+				+1.0
3,620,395	-				-0.8
3,620,411	+				-0.5
3,620,411	+				-0.5
3,620,411	+				+0.0
3,620,412	-				-1.6
3,620,412	-				+0.4
3,620,412	-				-1.5
3,620,415	+				+0.2
3,620,415	+				-0.5
3,620,416	-				-1.6
3,620,581	-		DDA3937_RS15830	0.40	+0.4
3,620,596	+		DDA3937_RS15830	0.43	+0.6
3,620,596	+		DDA3937_RS15830	0.43	-0.5
3,620,596	+		DDA3937_RS15830	0.43	-0.1
3,620,596	+		DDA3937_RS15830	0.43	+2.5
3,620,596	+		DDA3937_RS15830	0.43	-0.1
3,620,597	-		DDA3937_RS15830	0.44	-0.7
3,620,597	-		DDA3937_RS15830	0.44	-0.3
3,620,597	-		DDA3937_RS15830	0.44	+0.0
3,620,597	-		DDA3937_RS15830	0.44	+1.6
3,620,597	-		DDA3937_RS15830	0.44	+2.8
3,620,597	-		DDA3937_RS15830	0.44	+3.5
3,620,629	-		DDA3937_RS15830	0.51	-0.4
3,620,642	+		DDA3937_RS15830	0.54	-0.3
3,620,643	-		DDA3937_RS15830	0.54	+0.0
3,620,649	+		DDA3937_RS15830	0.56	+3.6
3,620,663	+		DDA3937_RS15830	0.59	-1.0
3,620,664	-		DDA3937_RS15830	0.59	-1.3
3,620,673	+		DDA3937_RS15830	0.61	-1.2
3,620,673	+		DDA3937_RS15830	0.61	+1.0
3,620,673	+		DDA3937_RS15830	0.61	-1.7
3,620,674	-		DDA3937_RS15830	0.61	-0.3
3,620,714	+		DDA3937_RS15830	0.71	-1.0
3,620,715	-		DDA3937_RS15830	0.71	-0.9
3,620,764	+		DDA3937_RS15830	0.82	+0.0
3,620,764	+		DDA3937_RS15830	0.82	-0.1
3,620,764	+		DDA3937_RS15830	0.82	+0.8
3,620,765	-		DDA3937_RS15830	0.82	+2.6
3,620,765	-		DDA3937_RS15830	0.82	-0.1
3,620,765	-		DDA3937_RS15830	0.82	-0.4
3,620,765	-		DDA3937_RS15830	0.82	+0.6
3,620,809	+				+0.4
3,620,840	-				+1.2
3,620,840	-				-0.1
3,620,850	+				-0.6
3,620,911	-				+0.9
3,620,911	-				+0.0
3,620,912	+				-0.2
3,620,912	+				-1.2
3,621,129	+		DDA3937_RS15835	0.24	+0.8
3,621,130	-		DDA3937_RS15835	0.24	-0.7
3,621,130	-		DDA3937_RS15835	0.24	-1.9
3,621,130	-		DDA3937_RS15835	0.24	+0.4
3,621,130	-		DDA3937_RS15835	0.24	-2.1
3,621,130	-		DDA3937_RS15835	0.24	-0.6
3,621,130	-		DDA3937_RS15835	0.24	-0.4
3,621,181	-		DDA3937_RS15835	0.29	+0.4
3,621,182	+		DDA3937_RS15835	0.29	-1.3
3,621,183	-		DDA3937_RS15835	0.30	+6.5
3,621,183	-		DDA3937_RS15835	0.30	-1.0
3,621,183	-		DDA3937_RS15835	0.30	-1.5
3,621,209	+		DDA3937_RS15835	0.32	-0.2
3,621,209	+		DDA3937_RS15835	0.32	-0.2
3,621,209	+		DDA3937_RS15835	0.32	-1.0
3,621,209	+		DDA3937_RS15835	0.32	+2.0
3,621,209	+		DDA3937_RS15835	0.32	-1.5
3,621,209	+		DDA3937_RS15835	0.32	+0.3
3,621,209	+		DDA3937_RS15835	0.32	-1.3
3,621,209	+		DDA3937_RS15835	0.32	+0.1
3,621,209	+		DDA3937_RS15835	0.32	+1.7
3,621,210	-		DDA3937_RS15835	0.32	-1.3
3,621,210	-		DDA3937_RS15835	0.32	-0.4
3,621,210	-		DDA3937_RS15835	0.32	+2.0
3,621,210	-		DDA3937_RS15835	0.32	-0.5
3,621,210	-		DDA3937_RS15835	0.32	-1.8
3,621,210	-		DDA3937_RS15835	0.32	-0.4
3,621,210	-		DDA3937_RS15835	0.32	-1.3
3,621,210	-		DDA3937_RS15835	0.32	+3.9
3,621,210	-		DDA3937_RS15835	0.32	+0.4
3,621,210	-		DDA3937_RS15835	0.32	-0.0
3,621,259	+		DDA3937_RS15835	0.37	-2.1
3,621,260	-		DDA3937_RS15835	0.37	-1.6
3,621,325	-		DDA3937_RS15835	0.44	+0.3
3,621,431	-		DDA3937_RS15835	0.54	-1.0
3,621,431	-		DDA3937_RS15835	0.54	-0.6
3,621,574	-		DDA3937_RS15835	0.69	+0.9
3,621,574	-		DDA3937_RS15835	0.69	+1.4
3,621,618	+		DDA3937_RS15835	0.73	-1.2
3,621,619	-		DDA3937_RS15835	0.73	-0.6
3,621,635	+		DDA3937_RS15835	0.75	+1.0
3,621,635	+		DDA3937_RS15835	0.75	+1.8
3,621,636	-		DDA3937_RS15835	0.75	+0.9
3,621,709	-		DDA3937_RS15835	0.82	+0.4
3,621,859	-				+0.4
3,621,884	-				+1.0
3,622,011	+		DDA3937_RS15840	0.16	-0.1
3,622,011	+		DDA3937_RS15840	0.16	-0.9
3,622,011	+		DDA3937_RS15840	0.16	-0.6
3,622,011	+		DDA3937_RS15840	0.16	-1.2
3,622,011	+		DDA3937_RS15840	0.16	-0.3
3,622,011	+		DDA3937_RS15840	0.16	-0.6
3,622,011	+		DDA3937_RS15840	0.16	-1.6
3,622,012	-		DDA3937_RS15840	0.16	-0.6
3,622,012	-		DDA3937_RS15840	0.16	-0.6
3,622,012	-		DDA3937_RS15840	0.16	+0.5
3,622,048	+		DDA3937_RS15840	0.20	-0.3
3,622,066	+		DDA3937_RS15840	0.22	-0.6
3,622,066	+		DDA3937_RS15840	0.22	-1.6
3,622,067	-		DDA3937_RS15840	0.22	-1.3
3,622,135	-		DDA3937_RS15840	0.30	-0.3
3,622,269	+		DDA3937_RS15840	0.45	+1.5
3,622,269	+		DDA3937_RS15840	0.45	+1.1
3,622,269	+		DDA3937_RS15840	0.45	-1.7
3,622,270	-		DDA3937_RS15840	0.45	-1.5
3,622,270	-		DDA3937_RS15840	0.45	-0.5
3,622,270	-		DDA3937_RS15840	0.45	+0.5
3,622,271	-		DDA3937_RS15840	0.45	-1.6
3,622,317	+		DDA3937_RS15840	0.50	+0.3
3,622,317	+		DDA3937_RS15840	0.50	+1.5
3,622,317	+		DDA3937_RS15840	0.50	-2.0
3,622,318	-				+0.0
3,622,333	+		DDA3937_RS15840	0.52	-1.2
3,622,333	+		DDA3937_RS15840	0.52	+0.8
3,622,333	+		DDA3937_RS15840	0.52	-0.5
3,622,333	+		DDA3937_RS15840	0.52	+1.7
3,622,333	+				+0.4
3,622,333	+		DDA3937_RS15840	0.52	-0.2
3,622,333	+		DDA3937_RS15840	0.52	-0.8
3,622,334	-				+0.4
3,622,334	-		DDA3937_RS15840	0.52	-0.3
3,622,334	-		DDA3937_RS15840	0.52	+0.3
3,622,334	-		DDA3937_RS15840	0.52	-1.2
3,622,354	-		DDA3937_RS15840	0.54	+1.4
3,622,354	-		DDA3937_RS15840	0.54	-2.4
3,622,386	+		DDA3937_RS15840	0.58	+3.0
3,622,386	+		DDA3937_RS15840	0.58	+3.1
3,622,386	+		DDA3937_RS15840	0.58	-1.0
3,622,386	+		DDA3937_RS15840	0.58	-1.0
3,622,386	+		DDA3937_RS15840	0.58	-0.1
3,622,386	+		DDA3937_RS15840	0.58	-0.1
3,622,386	+		DDA3937_RS15840	0.58	-0.4
3,622,386	+		DDA3937_RS15840	0.58	-0.1
3,622,386	+		DDA3937_RS15840	0.58	+0.0
3,622,386	+		DDA3937_RS15840	0.58	+0.7
3,622,386	+		DDA3937_RS15840	0.58	-1.4
3,622,386	+		DDA3937_RS15840	0.58	-0.9
3,622,386	+		DDA3937_RS15840	0.58	-0.4
3,622,386	+		DDA3937_RS15840	0.58	-0.4
3,622,386	+		DDA3937_RS15840	0.58	-1.5
3,622,386	+		DDA3937_RS15840	0.58	-0.3
3,622,386	+		DDA3937_RS15840	0.58	-0.4
3,622,386	+				-0.3
3,622,387	-		DDA3937_RS15840	0.58	+1.2
3,622,387	-		DDA3937_RS15840	0.58	-1.7
3,622,387	-		DDA3937_RS15840	0.58	-0.2
3,622,387	-		DDA3937_RS15840	0.58	-0.3
3,622,387	-		DDA3937_RS15840	0.58	-0.2
3,622,387	-		DDA3937_RS15840	0.58	-0.2
3,622,387	-		DDA3937_RS15840	0.58	-0.1
3,622,387	-				+0.0
3,622,387	-				+1.0
3,622,387	-		DDA3937_RS15840	0.58	-0.8
3,622,387	-		DDA3937_RS15840	0.58	+1.3
3,622,387	-		DDA3937_RS15840	0.58	-1.3
3,622,443	-		DDA3937_RS15840	0.65	-2.1
3,622,502	+		DDA3937_RS15840	0.71	+4.5
3,622,508	-		DDA3937_RS15840	0.72	+1.2
3,622,601	-		DDA3937_RS15840	0.82	-0.4
3,622,689	+				-1.2
3,622,689	+				-0.3
3,622,689	+				-1.0
3,622,689	+				+1.0
3,622,690	-				-1.9
3,622,690	-				-0.6
3,622,690	-				-0.5
3,622,690	-				-1.9
3,622,690	-				+0.0
3,622,690	-				-0.2
3,622,744	+				-2.0
3,622,745	-				+0.9
3,622,767	+				-0.9
3,622,768	-				-0.4
3,622,768	-				-0.2
3,622,768	-				-1.2
3,622,769	+				-0.1
3,622,769	+				+0.5
3,622,769	+				+0.3
3,622,769	+				-0.7
3,622,770	-				+0.4
3,622,770	-				+0.1
3,622,783	+				-1.5
3,622,783	+				+0.7
3,622,783	+				-2.0
3,622,784	-				-0.7
3,622,784	-				+1.3
3,622,784	-				+0.7
3,622,866	+		DDA3937_RS15845	0.12	-0.4
3,622,866	+		DDA3937_RS15845	0.12	-1.6
3,622,866	+		DDA3937_RS15845	0.12	-0.2
3,622,867	-		DDA3937_RS15845	0.12	-0.4
3,622,867	-		DDA3937_RS15845	0.12	+0.6
3,622,872	+		DDA3937_RS15845	0.13	-1.6