Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15765

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
3,609,823	+		DDA3937_RS15755	0.71	-1.5
3,609,823	+		DDA3937_RS15755	0.71	-1.2
3,609,823	+		DDA3937_RS15755	0.71	+2.7
3,609,824	-		DDA3937_RS15755	0.72	-2.0
3,609,912	-		DDA3937_RS15755	0.81	+0.0
3,609,925	-		DDA3937_RS15755	0.82	+1.2
3,609,958	+		DDA3937_RS15755	0.86	-1.5
3,609,958	+		DDA3937_RS15755	0.86	-0.3
3,609,958	+		DDA3937_RS15755	0.86	-0.1
3,609,959	-		DDA3937_RS15755	0.86	+0.0
3,609,970	+		DDA3937_RS15755	0.87	-1.6
3,610,046	-				-1.0
3,610,065	+				+0.4
3,610,066	-				+0.6
3,610,066	-				-0.3
3,610,113	-				-1.5
3,610,771	-				-1.2
3,610,771	-				-0.8
3,610,771	-				-0.3
3,610,794	-				+0.9
3,610,800	-				-1.0
3,610,800	-				+0.0
3,610,800	-				-0.3
3,610,811	-				-0.6
3,610,836	-				-2.5
3,610,836	-				+1.0
3,610,838	+				+0.3
3,610,839	-				+3.0
3,610,863	+				-1.2
3,610,865	+				-0.8
3,610,865	+				-1.6
3,610,866	-				-2.2
3,610,866	-				-0.2
3,610,918	+		DDA3937_RS15765	0.19	-2.4
3,610,918	+		DDA3937_RS15765	0.19	-1.5
3,610,919	-		DDA3937_RS15765	0.19	-0.5
3,610,919	-		DDA3937_RS15765	0.19	-1.8
3,610,919	-		DDA3937_RS15765	0.19	-2.1
3,610,919	-		DDA3937_RS15765	0.19	-1.7
3,610,946	+		DDA3937_RS15765	0.24	-1.3
3,610,946	+		DDA3937_RS15765	0.24	-2.0
3,610,947	-		DDA3937_RS15765	0.24	-1.1
3,610,947	-		DDA3937_RS15765	0.24	-0.9
3,610,947	-		DDA3937_RS15765	0.24	+0.8
3,610,947	-		DDA3937_RS15765	0.24	-1.9
3,610,947	-		DDA3937_RS15765	0.24	+0.8
3,610,947	-		DDA3937_RS15765	0.24	-1.1
3,610,982	+		DDA3937_RS15765	0.30	-1.8
3,610,983	-		DDA3937_RS15765	0.30	-0.4
3,610,983	-		DDA3937_RS15765	0.30	-1.9
3,610,985	+		DDA3937_RS15765	0.31	-0.9
3,610,985	+		DDA3937_RS15765	0.31	-1.2
3,610,985	+		DDA3937_RS15765	0.31	-1.8
3,610,986	-		DDA3937_RS15765	0.31	+0.0
3,611,004	+		DDA3937_RS15765	0.34	-0.3
3,611,004	+		DDA3937_RS15765	0.34	-1.6
3,611,022	+		DDA3937_RS15765	0.37	-0.8
3,611,022	+		DDA3937_RS15765	0.37	-1.5
3,611,022	+		DDA3937_RS15765	0.37	-1.5
3,611,022	+		DDA3937_RS15765	0.37	-2.2
3,611,023	-		DDA3937_RS15765	0.37	-0.4
3,611,023	-		DDA3937_RS15765	0.37	-0.4
3,611,023	-		DDA3937_RS15765	0.37	-2.2
3,611,023	-		DDA3937_RS15765	0.37	-1.2
3,611,023	-		DDA3937_RS15765	0.37	-1.4
3,611,023	-		DDA3937_RS15765	0.37	-2.2
3,611,023	-		DDA3937_RS15765	0.37	-1.5
3,611,023	-		DDA3937_RS15765	0.37	-2.0
3,611,100	-		DDA3937_RS15765	0.51	-1.0
3,611,100	-		DDA3937_RS15765	0.51	-0.4
3,611,132	-		DDA3937_RS15765	0.56	-1.0
3,611,156	+		DDA3937_RS15765	0.60	-0.7
3,611,156	+		DDA3937_RS15765	0.60	-1.0
3,611,156	+		DDA3937_RS15765	0.60	+0.5
3,611,156	+		DDA3937_RS15765	0.60	+0.6
3,611,157	-		DDA3937_RS15765	0.60	-0.5
3,611,157	-		DDA3937_RS15765	0.60	-0.2
3,611,161	+		DDA3937_RS15765	0.61	-1.5
3,611,161	+		DDA3937_RS15765	0.61	-0.8
3,611,162	-		DDA3937_RS15765	0.61	-1.8
3,611,163	+		DDA3937_RS15765	0.61	-1.9
3,611,163	+		DDA3937_RS15765	0.61	-1.2
3,611,163	+		DDA3937_RS15765	0.61	-1.2
3,611,163	+		DDA3937_RS15765	0.61	-1.4
3,611,163	+		DDA3937_RS15765	0.61	-0.6
3,611,164	-		DDA3937_RS15765	0.62	-0.8
3,611,164	-		DDA3937_RS15765	0.62	-2.2
3,611,164	-		DDA3937_RS15765	0.62	-0.4
3,611,164	-		DDA3937_RS15765	0.62	-1.5
3,611,164	-		DDA3937_RS15765	0.62	-1.0
3,611,164	-		DDA3937_RS15765	0.62	-1.9
3,611,173	+		DDA3937_RS15765	0.63	-2.2
3,611,173	+		DDA3937_RS15765	0.63	-1.3
3,611,174	-		DDA3937_RS15765	0.63	-1.6
3,611,212	+		DDA3937_RS15765	0.70	-2.6
3,611,213	-		DDA3937_RS15765	0.70	-0.6
3,611,222	+		DDA3937_RS15765	0.72	-2.2
3,611,222	+		DDA3937_RS15765	0.72	-0.6
3,611,223	-		DDA3937_RS15765	0.72	+0.1
3,611,239	-		DDA3937_RS15765	0.75	-1.4
3,611,239	-		DDA3937_RS15765	0.75	-1.0
3,611,267	-		DDA3937_RS15765	0.80	-1.2
3,611,267	-		DDA3937_RS15765	0.80	-0.9
3,611,267	-		DDA3937_RS15765	0.80	-0.8
3,611,267	-		DDA3937_RS15765	0.80	-0.9
3,611,291	+		DDA3937_RS15765	0.84	-1.6
3,611,292	-		DDA3937_RS15765	0.84	-0.9
3,611,292	-		DDA3937_RS15765	0.84	-1.5
3,611,292	-		DDA3937_RS15765	0.84	+0.2
3,611,292	-		DDA3937_RS15765	0.84	-1.0
3,611,313	+		DDA3937_RS15765	0.88	-1.2
3,611,314	-		DDA3937_RS15765	0.88	-1.7
3,611,319	-		DDA3937_RS15765	0.89	+1.3
3,611,371	-				-0.7
3,611,431	+				+0.3
3,611,431	+				-1.0
3,611,431	+				-0.4
3,611,431	+				-2.4
3,611,431	+				+0.1
3,611,431	+				+1.6
3,611,432	-				+0.0
3,611,441	+				-2.5
3,611,441	+				+0.4
3,611,441	+				-0.2
3,611,441	+				+2.5
3,611,441	+				-0.2
3,611,441	+				+0.2
3,611,442	-				-0.9
3,611,442	-				+0.2
3,611,442	-				+0.0
3,611,443	+				+0.6
3,611,443	+				+0.2
3,611,443	+				-0.5
3,611,443	+				+0.6
3,611,443	+				-1.2
3,611,443	+				-1.5
3,611,443	+				+0.6
3,611,443	+				+0.0
3,611,443	+				-1.5
3,611,443	+				-0.1
3,611,444	-				+0.4
3,611,444	-				-0.8
3,611,445	+				-0.3
3,611,490	-				+2.9
3,611,490	-				+1.0
3,611,529	+				-0.7
3,611,530	-				-1.6
3,611,555	+				-0.3
3,611,574	+				+1.0
3,611,574	+				-0.8
3,611,574	+				-0.9
3,611,575	-				-1.4
3,611,591	+				+4.7
3,611,592	-				-1.0
3,611,622	+				+0.7
3,611,622	+				+0.5
3,611,727	-				-1.0
3,611,729	+				+0.6
3,611,729	+				+0.6
3,611,729	+				-0.3
3,611,729	+				-1.0
3,611,729	+				+0.0
3,611,730	-				+3.0
3,611,748	+				+0.4
3,611,748	+				+0.0
3,611,871	+				-1.5
3,611,871	+				+1.1
3,611,871	+				-1.2
3,611,871	+				-1.2
3,611,872	-				-0.3
3,611,936	+		DDA3937_RS15770	0.13	-0.7
3,612,173	-		DDA3937_RS15770	0.28	-0.4
3,612,193	+		DDA3937_RS15770	0.29	-1.2
3,612,193	+		DDA3937_RS15770	0.29	-0.6
3,612,193	+		DDA3937_RS15770	0.29	-1.5
3,612,194	-		DDA3937_RS15770	0.29	-0.2
3,612,269	-		DDA3937_RS15770	0.34	-0.5
3,612,276	+		DDA3937_RS15770	0.34	-0.1
3,612,276	+		DDA3937_RS15770	0.34	-2.0
3,612,276	+		DDA3937_RS15770	0.34	+0.4
3,612,276	+		DDA3937_RS15770	0.34	-0.2
3,612,276	+		DDA3937_RS15770	0.34	-1.5
3,612,276	+		DDA3937_RS15770	0.34	+0.4
3,612,277	-		DDA3937_RS15770	0.34	-1.6
3,612,277	-		DDA3937_RS15770	0.34	-0.7
3,612,361	-		DDA3937_RS15770	0.39	+0.7
3,612,361	-		DDA3937_RS15770	0.39	+1.7
3,612,366	+		DDA3937_RS15770	0.40	+3.8
3,612,366	+		DDA3937_RS15770	0.40	+0.3
3,612,367	-		DDA3937_RS15770	0.40	-0.3
3,612,367	-		DDA3937_RS15770	0.40	-1.0