Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11815

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,683,005	+				+0.4
2,683,030	+				-0.2
2,683,032	+				-0.7
2,683,320	+		DDA3937_RS11810	0.25	+0.3
2,683,349	-		DDA3937_RS11810	0.29	-0.4
2,683,520	+		DDA3937_RS11810	0.50	-0.7
2,683,520	+		DDA3937_RS11810	0.50	-0.1
2,683,520	+		DDA3937_RS11810	0.50	+0.7
2,683,520	+		DDA3937_RS11810	0.50	-0.4
2,683,521	-		DDA3937_RS11810	0.50	+0.5
2,683,521	-		DDA3937_RS11810	0.50	+0.1
2,683,521	-		DDA3937_RS11810	0.50	-0.3
2,683,627	-		DDA3937_RS11810	0.63	-0.5
2,683,794	-		DDA3937_RS11810	0.83	+3.2
2,684,009	+				-1.2
2,684,009	+				+0.1
2,684,009	+				-0.9
2,684,009	+				-0.3
2,684,009	+				-0.6
2,684,009	+				+0.1
2,684,009	+				+0.3
2,684,009	+				-1.5
2,684,009	+				+1.9
2,684,009	+				-1.2
2,684,009	+				-1.4
2,684,010	-				-0.2
2,684,010	-				-0.3
2,684,010	-				-1.9
2,684,010	-				+0.3
2,684,018	+				-1.2
2,684,018	+				-0.6
2,684,018	+				+0.2
2,684,018	+				-0.5
2,684,018	+				-1.5
2,684,019	-				-0.0
2,684,019	-				+0.1
2,684,019	-				+3.8
2,684,109	-		DDA3937_RS11815	0.11	-0.8
2,684,109	-		DDA3937_RS11815	0.11	+2.9
2,684,109	-		DDA3937_RS11815	0.11	-3.0
2,684,156	+		DDA3937_RS11815	0.15	-0.9
2,684,156	+		DDA3937_RS11815	0.15	-0.7
2,684,156	+		DDA3937_RS11815	0.15	-0.6
2,684,157	-		DDA3937_RS11815	0.15	+0.4
2,684,157	-		DDA3937_RS11815	0.15	-0.9
2,684,157	-		DDA3937_RS11815	0.15	-0.3
2,684,157	-		DDA3937_RS11815	0.15	+1.1
2,684,157	-		DDA3937_RS11815	0.15	+0.4
2,684,157	-		DDA3937_RS11815	0.15	+0.2
2,684,157	-		DDA3937_RS11815	0.15	-0.6
2,684,157	-		DDA3937_RS11815	0.15	-0.3
2,684,157	-		DDA3937_RS11815	0.15	-0.7
2,684,210	+		DDA3937_RS11815	0.19	-0.4
2,684,211	-				-0.9
2,684,225	+		DDA3937_RS11815	0.20	-2.1
2,684,225	+		DDA3937_RS11815	0.20	+0.8
2,684,225	+		DDA3937_RS11815	0.20	-2.4
2,684,225	+		DDA3937_RS11815	0.20	+0.3
2,684,225	+		DDA3937_RS11815	0.20	-0.8
2,684,225	+		DDA3937_RS11815	0.20	-1.1
2,684,225	+		DDA3937_RS11815	0.20	-0.8
2,684,225	+		DDA3937_RS11815	0.20	-1.5
2,684,225	+		DDA3937_RS11815	0.20	-0.2
2,684,225	+		DDA3937_RS11815	0.20	+0.8
2,684,226	-		DDA3937_RS11815	0.20	+0.1
2,684,226	-		DDA3937_RS11815	0.20	+0.6
2,684,226	-		DDA3937_RS11815	0.20	-0.0
2,684,226	-		DDA3937_RS11815	0.20	+0.3
2,684,226	-		DDA3937_RS11815	0.20	-1.2
2,684,227	-		DDA3937_RS11815	0.21	+0.6
2,684,282	+		DDA3937_RS11815	0.25	+4.1
2,684,282	+		DDA3937_RS11815	0.25	+2.1
2,684,282	+		DDA3937_RS11815	0.25	+0.4
2,684,282	+		DDA3937_RS11815	0.25	+0.3
2,684,282	+		DDA3937_RS11815	0.25	-0.4
2,684,282	+		DDA3937_RS11815	0.25	-2.2
2,684,282	+		DDA3937_RS11815	0.25	+0.8
2,684,282	+		DDA3937_RS11815	0.25	-1.1
2,684,283	-		DDA3937_RS11815	0.25	+0.4
2,684,283	-		DDA3937_RS11815	0.25	+0.2
2,684,283	-		DDA3937_RS11815	0.25	-1.3
2,684,283	-		DDA3937_RS11815	0.25	-0.9
2,684,283	-		DDA3937_RS11815	0.25	-0.9
2,684,283	-		DDA3937_RS11815	0.25	-0.8
2,684,283	-		DDA3937_RS11815	0.25	-1.4
2,684,283	-		DDA3937_RS11815	0.25	-0.0
2,684,312	+		DDA3937_RS11815	0.27	+0.3
2,684,312	+		DDA3937_RS11815	0.27	+1.2
2,684,360	+		DDA3937_RS11815	0.31	-0.4
2,684,360	+		DDA3937_RS11815	0.31	-1.4
2,684,376	+		DDA3937_RS11815	0.32	+1.8
2,684,455	+		DDA3937_RS11815	0.38	-1.5
2,684,455	+		DDA3937_RS11815	0.38	-0.9
2,684,456	-		DDA3937_RS11815	0.39	+0.1
2,684,456	-		DDA3937_RS11815	0.39	+0.1
2,684,456	-		DDA3937_RS11815	0.39	+0.1
2,684,456	-		DDA3937_RS11815	0.39	-1.2
2,684,629	+		DDA3937_RS11815	0.52	-0.7
2,684,629	+		DDA3937_RS11815	0.52	+0.3
2,684,629	+		DDA3937_RS11815	0.52	-1.2
2,684,630	-		DDA3937_RS11815	0.52	-0.2
2,684,630	-		DDA3937_RS11815	0.52	-0.7
2,684,630	-		DDA3937_RS11815	0.52	-2.2
2,684,630	-				+0.1
2,684,639	+		DDA3937_RS11815	0.53	-1.4
2,684,639	+		DDA3937_RS11815	0.53	-2.8
2,684,639	+		DDA3937_RS11815	0.53	-1.2
2,684,639	+		DDA3937_RS11815	0.53	-1.7
2,684,639	+		DDA3937_RS11815	0.53	-0.9
2,684,639	+		DDA3937_RS11815	0.53	-0.9
2,684,639	+		DDA3937_RS11815	0.53	-1.1
2,684,639	+		DDA3937_RS11815	0.53	-0.2
2,684,639	+		DDA3937_RS11815	0.53	+0.0
2,684,639	+		DDA3937_RS11815	0.53	-1.3
2,684,639	+		DDA3937_RS11815	0.53	-0.2
2,684,640	-		DDA3937_RS11815	0.53	+0.2
2,684,640	-		DDA3937_RS11815	0.53	+0.1
2,684,640	-		DDA3937_RS11815	0.53	-0.7
2,684,640	-		DDA3937_RS11815	0.53	+0.3
2,684,640	-		DDA3937_RS11815	0.53	-0.3
2,684,640	-		DDA3937_RS11815	0.53	-0.2
2,684,640	-		DDA3937_RS11815	0.53	-0.7
2,684,640	-		DDA3937_RS11815	0.53	-0.1
2,684,718	-		DDA3937_RS11815	0.59	-1.0
2,684,720	+		DDA3937_RS11815	0.59	-1.5
2,684,720	+		DDA3937_RS11815	0.59	-1.4
2,684,721	-		DDA3937_RS11815	0.59	+1.1
2,684,727	+		DDA3937_RS11815	0.60	-2.2
2,684,727	+		DDA3937_RS11815	0.60	-0.5
2,684,839	-		DDA3937_RS11815	0.69	+0.2
2,684,856	+		DDA3937_RS11815	0.70	-1.2
2,684,857	-		DDA3937_RS11815	0.70	+0.1
2,684,883	-		DDA3937_RS11815	0.72	+0.1
2,685,122	-				-1.4
2,685,217	+				-0.6
2,685,217	+				-1.8
2,685,220	+				-1.3
2,685,220	+				+0.2
2,685,221	-				+3.1
2,685,221	-				-0.4
2,685,237	+				-1.2
2,685,237	+				+0.9
2,685,238	-				-0.4
2,685,238	-				+0.8
2,685,238	-				+0.5
2,685,238	-				-0.4
2,685,238	-				-1.9
2,685,238	-				+0.1
2,685,275	+				-0.7
2,685,276	-				+0.4
2,685,550	-		DDA3937_RS11820	0.27	-2.4
2,685,550	-		DDA3937_RS11820	0.27	-0.4
2,685,560	+		DDA3937_RS11820	0.28	+0.4
2,685,561	-		DDA3937_RS11820	0.28	-0.2
2,685,582	+		DDA3937_RS11820	0.30	-0.4
2,685,582	+		DDA3937_RS11820	0.30	+0.6
2,685,630	-		DDA3937_RS11820	0.34	-0.1
2,685,630	-		DDA3937_RS11820	0.34	-0.9
2,685,630	-		DDA3937_RS11820	0.34	-0.7
2,685,630	-		DDA3937_RS11820	0.34	-0.7
2,685,770	+		DDA3937_RS11820	0.48	-1.2
2,685,770	+		DDA3937_RS11820	0.48	+2.1
2,685,770	+		DDA3937_RS11820	0.48	-0.1
2,685,771	-		DDA3937_RS11820	0.48	+0.2
2,685,771	-		DDA3937_RS11820	0.48	+0.1
2,685,835	-		DDA3937_RS11820	0.54	+1.9
2,685,909	+		DDA3937_RS11820	0.62	+0.5
2,685,910	-		DDA3937_RS11820	0.62	-1.5
2,685,920	+		DDA3937_RS11820	0.63	+0.6
2,685,920	+		DDA3937_RS11820	0.63	-0.4
2,685,921	-		DDA3937_RS11820	0.63	-0.5
2,685,928	+		DDA3937_RS11820	0.63	-0.2
2,685,929	-		DDA3937_RS11820	0.63	+1.6
2,686,136	+		DDA3937_RS11820	0.84	-1.7
2,686,137	-		DDA3937_RS11820	0.84	+1.8
2,686,184	+		DDA3937_RS11820	0.88	-0.7
2,686,184	+		DDA3937_RS11820	0.88	+0.7