Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10815

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,434,276	+		DDA3937_RS10810	0.36	-0.8
2,434,277	-		DDA3937_RS10810	0.36	-0.5
2,434,288	+		DDA3937_RS10810	0.36	+0.1
2,434,288	+		DDA3937_RS10810	0.36	+0.5
2,434,288	+		DDA3937_RS10810	0.36	+2.1
2,434,288	+		DDA3937_RS10810	0.36	-1.3
2,434,288	+		DDA3937_RS10810	0.36	-0.3
2,434,288	+		DDA3937_RS10810	0.36	+1.8
2,434,288	+		DDA3937_RS10810	0.36	-0.2
2,434,288	+		DDA3937_RS10810	0.36	-0.8
2,434,289	-		DDA3937_RS10810	0.36	-1.1
2,434,289	-		DDA3937_RS10810	0.36	+0.8
2,434,289	-		DDA3937_RS10810	0.36	-0.6
2,434,289	-		DDA3937_RS10810	0.36	-0.5
2,434,294	+		DDA3937_RS10810	0.37	-1.5
2,434,294	+		DDA3937_RS10810	0.37	-0.5
2,434,294	+		DDA3937_RS10810	0.37	-2.8
2,434,295	-		DDA3937_RS10810	0.37	-0.8
2,434,295	-		DDA3937_RS10810	0.37	-1.1
2,434,295	-		DDA3937_RS10810	0.37	-1.0
2,434,387	+		DDA3937_RS10810	0.43	+0.1
2,434,388	-		DDA3937_RS10810	0.44	-0.4
2,434,490	+		DDA3937_RS10810	0.51	-2.2
2,434,490	+		DDA3937_RS10810	0.51	-0.5
2,434,490	+		DDA3937_RS10810	0.51	-1.1
2,434,491	-		DDA3937_RS10810	0.51	+0.6
2,434,575	-		DDA3937_RS10810	0.57	-1.0
2,434,575	-		DDA3937_RS10810	0.57	+0.4
2,434,696	+		DDA3937_RS10810	0.65	-0.6
2,434,765	+		DDA3937_RS10810	0.70	-0.5
2,434,766	-		DDA3937_RS10810	0.70	-1.1
2,434,862	-		DDA3937_RS10810	0.77	+0.5
2,434,862	-		DDA3937_RS10810	0.77	-1.1
2,434,896	+		DDA3937_RS10810	0.80	+0.2
2,434,897	-		DDA3937_RS10810	0.80	-0.2
2,434,900	+				+1.5
2,434,900	+		DDA3937_RS10810	0.80	+1.4
2,434,900	+		DDA3937_RS10810	0.80	+1.2
2,434,900	+		DDA3937_RS10810	0.80	+0.9
2,434,900	+		DDA3937_RS10810	0.80	+0.2
2,434,900	+		DDA3937_RS10810	0.80	-0.8
2,434,900	+		DDA3937_RS10810	0.80	-0.2
2,434,900	+		DDA3937_RS10810	0.80	-1.1
2,434,900	+		DDA3937_RS10810	0.80	+1.1
2,434,900	+		DDA3937_RS10810	0.80	+0.7
2,434,900	+		DDA3937_RS10810	0.80	-2.7
2,434,900	+		DDA3937_RS10810	0.80	+6.5
2,434,900	+		DDA3937_RS10810	0.80	-2.3
2,434,900	+		DDA3937_RS10810	0.80	-1.1
2,434,900	+		DDA3937_RS10810	0.80	+2.1
2,434,901	-		DDA3937_RS10810	0.80	-1.1
2,434,901	-		DDA3937_RS10810	0.80	+5.8
2,434,901	-		DDA3937_RS10810	0.80	-0.1
2,434,901	-		DDA3937_RS10810	0.80	-0.9
2,434,901	-		DDA3937_RS10810	0.80	+0.8
2,434,901	-		DDA3937_RS10810	0.80	-0.8
2,434,901	-		DDA3937_RS10810	0.80	-1.0
2,434,901	-		DDA3937_RS10810	0.80	+0.1
2,434,901	-		DDA3937_RS10810	0.80	-0.8
2,434,904	+		DDA3937_RS10810	0.80	-0.6
2,434,905	-		DDA3937_RS10810	0.80	+0.6
2,434,905	-		DDA3937_RS10810	0.80	+1.1
2,434,910	-		DDA3937_RS10810	0.81	-1.1
2,434,929	-		DDA3937_RS10810	0.82	+0.4
2,434,929	-		DDA3937_RS10810	0.82	-0.1
2,434,969	+		DDA3937_RS10810	0.85	-1.3
2,434,969	+		DDA3937_RS10810	0.85	-1.8
2,434,981	+		DDA3937_RS10810	0.86	+0.8
2,434,981	+		DDA3937_RS10810	0.86	+1.1
2,434,981	+		DDA3937_RS10810	0.86	-0.6
2,434,981	+		DDA3937_RS10810	0.86	-0.5
2,434,981	+		DDA3937_RS10810	0.86	+0.0
2,434,981	+		DDA3937_RS10810	0.86	-0.6
2,434,981	+		DDA3937_RS10810	0.86	+0.5
2,434,982	-		DDA3937_RS10810	0.86	-1.5
2,434,982	-		DDA3937_RS10810	0.86	-0.8
2,434,985	+		DDA3937_RS10810	0.86	-1.8
2,434,985	+		DDA3937_RS10810	0.86	-0.1
2,434,985	+		DDA3937_RS10810	0.86	-0.3
2,434,985	+		DDA3937_RS10810	0.86	+0.1
2,434,985	+		DDA3937_RS10810	0.86	-1.5
2,434,985	+		DDA3937_RS10810	0.86	-1.2
2,434,985	+		DDA3937_RS10810	0.86	-0.1
2,434,985	+		DDA3937_RS10810	0.86	-1.5
2,434,985	+		DDA3937_RS10810	0.86	-0.8
2,434,985	+		DDA3937_RS10810	0.86	+0.7
2,434,985	+		DDA3937_RS10810	0.86	-2.5
2,434,985	+		DDA3937_RS10810	0.86	+0.0
2,434,985	+		DDA3937_RS10810	0.86	-0.8
2,434,985	+				-0.5
2,434,985	+		DDA3937_RS10810	0.86	-1.8
2,434,985	+		DDA3937_RS10810	0.86	-0.2
2,434,985	+		DDA3937_RS10810	0.86	-0.3
2,434,986	-		DDA3937_RS10810	0.86	-0.3
2,434,986	-				-0.5
2,434,986	-				+0.5
2,434,986	-		DDA3937_RS10810	0.86	+0.2
2,434,986	-		DDA3937_RS10810	0.86	-0.4
2,434,986	-		DDA3937_RS10810	0.86	-1.5
2,434,986	-				+0.5
2,434,986	-		DDA3937_RS10810	0.86	-1.5
2,434,986	-		DDA3937_RS10810	0.86	-0.1
2,434,987	+		DDA3937_RS10810	0.86	-0.5
2,434,987	+		DDA3937_RS10810	0.86	+0.2
2,434,987	+		DDA3937_RS10810	0.86	-2.5
2,434,987	+		DDA3937_RS10810	0.86	-0.6
2,434,988	-		DDA3937_RS10810	0.86	+1.9
2,434,988	-		DDA3937_RS10810	0.86	+1.2
2,435,145	+				-1.1
2,435,146	-				-0.5
2,435,160	+				-1.0
2,435,160	+				-1.2
2,435,160	+				-0.5
2,435,160	+				-0.3
2,435,161	-				-1.1
2,435,163	+				+0.7
2,435,237	+				-1.3
2,435,238	-				-0.1
2,435,245	+				-1.3
2,435,246	-				+0.1
2,435,246	-				-1.3
2,435,246	-				-1.1
2,435,295	-				-0.1
2,435,363	-		DDA3937_RS10815	0.13	-0.3
2,435,365	+		DDA3937_RS10815	0.13	+7.5
2,435,709	+		DDA3937_RS10815	0.38	-0.8
2,435,709	+		DDA3937_RS10815	0.38	-0.4
2,435,709	+		DDA3937_RS10815	0.38	+0.7
2,435,744	-		DDA3937_RS10815	0.41	+0.2
2,435,744	-		DDA3937_RS10815	0.41	-0.0
2,435,787	-		DDA3937_RS10815	0.44	+0.1
2,435,873	+		DDA3937_RS10815	0.50	-1.6
2,435,873	+		DDA3937_RS10815	0.50	-2.6
2,435,874	-		DDA3937_RS10815	0.51	-1.3
2,435,874	-				-0.8
2,435,874	-		DDA3937_RS10815	0.51	+0.0
2,435,887	+		DDA3937_RS10815	0.52	-0.8
2,435,887	+		DDA3937_RS10815	0.52	-1.1
2,435,887	+		DDA3937_RS10815	0.52	-0.5
2,435,887	+		DDA3937_RS10815	0.52	+1.1
2,435,887	+		DDA3937_RS10815	0.52	-0.8
2,435,887	+		DDA3937_RS10815	0.52	-2.6
2,435,887	+		DDA3937_RS10815	0.52	-0.3
2,435,887	+				+0.5
2,435,887	+		DDA3937_RS10815	0.52	+4.2
2,435,887	+		DDA3937_RS10815	0.52	+1.0
2,435,887	+		DDA3937_RS10815	0.52	+0.9
2,435,887	+		DDA3937_RS10815	0.52	-2.8
2,435,888	-		DDA3937_RS10815	0.52	-1.0
2,435,888	-		DDA3937_RS10815	0.52	-2.2
2,435,888	-		DDA3937_RS10815	0.52	-1.1
2,435,888	-		DDA3937_RS10815	0.52	-0.3
2,435,888	-		DDA3937_RS10815	0.52	+0.4
2,435,888	-		DDA3937_RS10815	0.52	-0.1
2,435,888	-				-0.1
2,435,888	-		DDA3937_RS10815	0.52	-0.5
2,435,888	-		DDA3937_RS10815	0.52	-1.3
2,435,888	-		DDA3937_RS10815	0.52	+0.7
2,435,888	-		DDA3937_RS10815	0.52	-1.8
2,435,888	-		DDA3937_RS10815	0.52	+1.9
2,435,892	-		DDA3937_RS10815	0.52	-1.5
2,436,024	+		DDA3937_RS10815	0.62	-0.6
2,436,025	-		DDA3937_RS10815	0.62	-1.1
2,436,025	-		DDA3937_RS10815	0.62	+1.1
2,436,036	+		DDA3937_RS10815	0.63	+0.2
2,436,053	+		DDA3937_RS10815	0.64	-1.8
2,436,053	+		DDA3937_RS10815	0.64	+4.2
2,436,060	+		DDA3937_RS10815	0.64	-0.8
2,436,060	+		DDA3937_RS10815	0.64	+0.5
2,436,061	-		DDA3937_RS10815	0.64	-1.1
2,436,061	-		DDA3937_RS10815	0.64	+0.9
2,436,197	-		DDA3937_RS10815	0.75	-1.1
2,436,197	-		DDA3937_RS10815	0.75	+2.7
2,436,234	+		DDA3937_RS10815	0.77	-0.7
2,436,234	+		DDA3937_RS10815	0.77	-1.9
2,436,235	-		DDA3937_RS10815	0.77	+0.5
2,436,522	+				-1.4
2,436,522	+				-0.5
2,436,522	+				-1.2
2,436,522	+				-0.3
2,436,523	-				-0.1
2,436,523	-				+0.5
2,436,523	-				-0.9
2,436,524	+				-0.6
2,436,524	+				+1.5
2,436,524	+				-0.4
2,436,524	+				-1.4
2,436,524	+				-1.0
2,436,524	+				-1.9
2,436,524	+				-0.8
2,436,525	-				-0.1
2,436,525	-				+0.5
2,436,525	-				+0.8
2,436,525	-				-0.2
2,436,645	+				-0.5
2,436,645	+				+1.2
2,436,714	+				-1.5
2,436,836	+		DDA3937_RS10820	0.16	-0.1
2,436,836	+		DDA3937_RS10820	0.16	-0.5
2,436,836	+		DDA3937_RS10820	0.16	+0.8
2,436,915	-		DDA3937_RS10820	0.21	+0.6
2,436,946	+		DDA3937_RS10820	0.23	-1.1
2,436,947	-		DDA3937_RS10820	0.23	-1.1
2,437,030	-		DDA3937_RS10820	0.28	-1.5
2,437,030	-		DDA3937_RS10820	0.28	+0.2
2,437,408	+		DDA3937_RS10820	0.49	+0.9
2,437,408	+		DDA3937_RS10820	0.49	+2.2
2,437,409	-		DDA3937_RS10820	0.50	-1.2